Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_P17
(761 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 28 0.082
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 24 1.3
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 1.3
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 24 1.3
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 24 1.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.1
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 4.1
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 4.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 4.1
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 4.1
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 4.1
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 4.1
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 4.1
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 4.1
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 5.4
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 7.1
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 7.1
S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor prot... 21 9.4
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 28.3 bits (60), Expect = 0.082
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +3
Query: 495 SLPRPGSRPLGGTPTPVTNTSLKANPQPSRN 587
S PR GS P TPTP T L Q RN
Sbjct: 149 SFPRGGSLPTPVTPTPTTVQQLLRRAQIRRN 179
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 10 DDNSLLLHDRTTDARARCRITALNLSRERDRQ 105
+DN + L RT + R + R A + +ER+R+
Sbjct: 21 EDNEIDLRSRTKEERLQHRREAWLIQQERERE 52
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 10 DDNSLLLHDRTTDARARCRITALNLSRERDRQ 105
+DN + L RT + R + R A + +ER+R+
Sbjct: 21 EDNKIDLRSRTKEERLQHRREAWLIQQERERE 52
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 10 DDNSLLLHDRTTDARARCRITALNLSRERDRQ 105
+DN + L RT + R + R A + +ER+R+
Sbjct: 21 EDNKIDLRSRTKEERLQHRREAWLIQQERERE 52
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 10 DDNSLLLHDRTTDARARCRITALNLSRERDRQF 108
+DN + L RT + R + R A + +ER++++
Sbjct: 21 EDNKIDLRSRTKEERLQYRREAWLVQQEREQEY 53
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.0 bits (47), Expect = 3.1
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 513 SRPLGGTPTPVTNTSLKANPQPSRNFGSGH 602
+R G T ++ N PSR GSGH
Sbjct: 1902 ARGKDGMTTEEMRKLIERNEAPSRQTGSGH 1931
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 10 DDNSLLLHDRTTDARARCRITALNLSRERDRQ 105
+DN + L RT + R + R + +ER+R+
Sbjct: 21 EDNKIDLRSRTKEERLQHRREVWLIQQERERE 52
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 10 DDNSLLLHDRTTDARARCRITALNLSRERDRQ 105
+DN + L RT + R + R + +ER+R+
Sbjct: 21 EDNKIDLRSRTKEERLQHRREVWLIQQERERE 52
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 10 DDNSLLLHDRTTDARARCRITALNLSRERDRQ 105
+DN + L RT + R + R + +ER+R+
Sbjct: 21 EDNKIDLRSRTKEERLQHRREVWLIQQERERE 52
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 10 DDNSLLLHDRTTDARARCRITALNLSRERDRQ 105
+DN + L RT + R + R + +ER+R+
Sbjct: 21 EDNKIDLRSRTKEERLQHRREVWLIQQERERE 52
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 10 DDNSLLLHDRTTDARARCRITALNLSRERDRQ 105
+DN + L RT + R + R + +ER+R+
Sbjct: 21 EDNKIDLRSRTKEERLQHRREVWLIQQERERE 52
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 10 DDNSLLLHDRTTDARARCRITALNLSRERDRQ 105
+DN + L RT + R + R + +ER+R+
Sbjct: 21 EDNKIDLRSRTKEERLQHRREVWLIQQERERE 52
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 10 DDNSLLLHDRTTDARARCRITALNLSRERDRQ 105
+DN + L RT + R + R + +ER+R+
Sbjct: 21 EDNKIDLRSRTKEERLQHRREVWLIQQERERE 52
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.6 bits (46), Expect = 4.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 24 ASPRSNDRRPRPVSYYSSKFIS*ARSP 104
ASPRS + P P +S ARSP
Sbjct: 736 ASPRSPNASPSPAEQCASTTTITARSP 762
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.2 bits (45), Expect = 5.4
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +1
Query: 646 PSRVS*TNNTTLLSIYTATRQLRRPCRPKP 735
P +S + ++ + S+Y + Q PC P P
Sbjct: 369 PPTLSESYSSYVNSMYASGAQFATPCTPSP 398
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 697 LYILTGVLYCLFTTL 653
LYIL+G LY TT+
Sbjct: 309 LYILSGCLYYFSTTI 323
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 501 PRPGSRPLGGTPTP 542
P PG +G TPTP
Sbjct: 115 PSPGMGHMGHTPTP 128
>S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor
protein.
Length = 85
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 425 SSADGVLRVLVTQGEHVCVV 366
SSA+G + + T G H+ +V
Sbjct: 41 SSAEGWFKAIGTCGSHIIIV 60
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,199
Number of Sequences: 438
Number of extensions: 4960
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -