Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_P16
(828 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071445-1|AAL49067.1| 419|Drosophila melanogaster RE52884p pro... 128 9e-30
AJ009963-1|CAA08919.1| 380|Drosophila melanogaster farnesyl pyr... 128 9e-30
AF132554-1|AAD27853.1| 419|Drosophila melanogaster GM06581p pro... 128 9e-30
AE013599-1264|AAF58670.1| 419|Drosophila melanogaster CG12389-P... 128 9e-30
AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-P... 33 0.48
AY071655-1|AAL49277.1| 485|Drosophila melanogaster RE73545p pro... 30 4.4
AE013599-3480|AAF46908.2| 485|Drosophila melanogaster CG30265-P... 30 4.4
AY071599-1|AAL49221.1| 338|Drosophila melanogaster RE65121p pro... 29 7.8
AF049659-1|AAC05273.1| 338|Drosophila melanogaster geranylgeran... 29 7.8
AE014296-1239|AAF50574.1| 338|Drosophila melanogaster CG8593-PA... 29 7.8
AE013599-3481|AAF46909.2| 467|Drosophila melanogaster CG12490-P... 29 7.8
>AY071445-1|AAL49067.1| 419|Drosophila melanogaster RE52884p
protein.
Length = 419
Score = 128 bits (309), Expect = 9e-30
Identities = 57/157 (36%), Positives = 95/157 (60%)
Frame = +2
Query: 344 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 523
+E + F + P+++ + +K W ++L YN+ GK RGI TV++YK +
Sbjct: 82 DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141
Query: 524 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFND 703
+ +T +K+A LGWCVEM Q++ I+ DD+MD S+ RRG PCW++ VG+T A ND
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AIND 200
Query: 704 SLLIHSSLFEFLKTNFRTNPNYMKMFELFNETLWRTS 814
+L+I ++++ LK +F Y+ + ELF+E + T+
Sbjct: 201 ALMIENAMYAILKKHFSHLDCYVALMELFHEITYITT 237
>AJ009963-1|CAA08919.1| 380|Drosophila melanogaster farnesyl
pyrophosphate synthase protein.
Length = 380
Score = 128 bits (309), Expect = 9e-30
Identities = 57/157 (36%), Positives = 95/157 (60%)
Frame = +2
Query: 344 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 523
+E + F + P+++ + +K W ++L YN+ GK RGI TV++YK +
Sbjct: 43 DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 102
Query: 524 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFND 703
+ +T +K+A LGWCVEM Q++ I+ DD+MD S+ RRG PCW++ VG+T A ND
Sbjct: 103 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AIND 161
Query: 704 SLLIHSSLFEFLKTNFRTNPNYMKMFELFNETLWRTS 814
+L+I ++++ LK +F Y+ + ELF+E + T+
Sbjct: 162 ALMIENAMYAILKKHFSHLDCYVALMELFHEITYITT 198
>AF132554-1|AAD27853.1| 419|Drosophila melanogaster GM06581p
protein.
Length = 419
Score = 128 bits (309), Expect = 9e-30
Identities = 57/157 (36%), Positives = 95/157 (60%)
Frame = +2
Query: 344 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 523
+E + F + P+++ + +K W ++L YN+ GK RGI TV++YK +
Sbjct: 82 DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141
Query: 524 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFND 703
+ +T +K+A LGWCVEM Q++ I+ DD+MD S+ RRG PCW++ VG+T A ND
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AIND 200
Query: 704 SLLIHSSLFEFLKTNFRTNPNYMKMFELFNETLWRTS 814
+L+I ++++ LK +F Y+ + ELF+E + T+
Sbjct: 201 ALMIENAMYAILKKHFSHLDCYVALMELFHEITYITT 237
>AE013599-1264|AAF58670.1| 419|Drosophila melanogaster CG12389-PA
protein.
Length = 419
Score = 128 bits (309), Expect = 9e-30
Identities = 57/157 (36%), Positives = 95/157 (60%)
Frame = +2
Query: 344 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 523
+E + F + P+++ + +K W ++L YN+ GK RGI TV++YK +
Sbjct: 82 DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141
Query: 524 KPEKVTEHTLKMACKLGWCVEMFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFND 703
+ +T +K+A LGWCVEM Q++ I+ DD+MD S+ RRG PCW++ VG+T A ND
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTRRGQPCWHKVENVGLT-AIND 200
Query: 704 SLLIHSSLFEFLKTNFRTNPNYMKMFELFNETLWRTS 814
+L+I ++++ LK +F Y+ + ELF+E + T+
Sbjct: 201 ALMIENAMYAILKKHFSHLDCYVALMELFHEITYITT 237
>AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-PB
protein.
Length = 4899
Score = 33.1 bits (72), Expect = 0.48
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = -1
Query: 765 LGLVLKLVFRNSNKELCIKRESLKAHVMPTSGRRYQQGMPRRTLEPSIMSSSTMQYA*NI 586
+G ++++ F EL +K+ SL+A +MPT + Q + + + + T+ A +
Sbjct: 2517 IGQIMEMGFTRRTVELALKQLSLQAEIMPTPEQIVQWILEHPDVCANTIEEDTLPLASSA 2576
Query: 585 STHHP 571
S+H P
Sbjct: 2577 SSHDP 2581
>AY071655-1|AAL49277.1| 485|Drosophila melanogaster RE73545p
protein.
Length = 485
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 555 KWLVNWDGVSKCFRHIALCWMTLWMVQASDAA 650
K + W G+S +AL W W V A+D A
Sbjct: 177 KSAIGWPGISYVSAGLALAWCAFWFVFAADNA 208
>AE013599-3480|AAF46908.2| 485|Drosophila melanogaster CG30265-PA
protein.
Length = 485
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 555 KWLVNWDGVSKCFRHIALCWMTLWMVQASDAA 650
K + W G+S +AL W W V A+D A
Sbjct: 177 KSAIGWPGISYVSAGLALAWCAFWFVFAADNA 208
>AY071599-1|AAL49221.1| 338|Drosophila melanogaster RE65121p
protein.
Length = 338
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 566 KLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 655
++G V+M +++DDI D S +RRG+P
Sbjct: 60 QIGDIVQMLHNSSLLIDDIEDNSILRRGVP 89
>AF049659-1|AAC05273.1| 338|Drosophila melanogaster geranylgeranyl
pyrophosphate synthaseprotein.
Length = 338
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 566 KLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 655
++G V+M +++DDI D S +RRG+P
Sbjct: 60 QIGDIVQMLHNSSLLIDDIEDNSILRRGVP 89
>AE014296-1239|AAF50574.1| 338|Drosophila melanogaster CG8593-PA
protein.
Length = 338
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 566 KLGWCVEMFQAYCIVLDDIMDGSSVRRGMP 655
++G V+M +++DDI D S +RRG+P
Sbjct: 60 QIGDIVQMLHNSSLLIDDIEDNSILRRGVP 89
>AE013599-3481|AAF46909.2| 467|Drosophila melanogaster CG12490-PA
protein.
Length = 467
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 555 KWLVNWDGVSKCFRHIALCWMTLWMVQASDAA 650
K + W G+S +A W +W V A+D A
Sbjct: 165 KSAIGWPGISYVSAGLAFAWCAIWFVFAADNA 196
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,006,986
Number of Sequences: 53049
Number of extensions: 839888
Number of successful extensions: 2036
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2032
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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