Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_P15
         (559 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   1.8  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.2  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -2

Query: 453 SGMVDYRSLWVPI*PRILRMDDWSVHTLLVYQLAMYEFLS*VRSLY 316
           S + DYRSLW+ +   I  + + S +T  V  L +Y FL    ++Y
Sbjct: 261 SQVADYRSLWMLLSKLIRDVGNASGYT--VTFLCLYLFLIITLTIY 304


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 446 IPEMDWRYCARMRIVIN*LLMCFKNK 523
           +PE D  Y  + R+ +  LL+  KNK
Sbjct: 268 VPETDEVYTGKRRLAMLDLLLTAKNK 293


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 446 IPEMDWRYCARMRIVIN*LLMCFKNK 523
           +PE D  Y  + R+ +  LL+  KNK
Sbjct: 268 VPETDEVYTGKRRLAMLDLLLTAKNK 293


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 90  TFYLSIVRP 116
           TFYL++VRP
Sbjct: 324 TFYLNVVRP 332


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,073
Number of Sequences: 336
Number of extensions: 2930
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)