Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_P14
(882 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharo... 64 3e-11
SPCC965.07c |gst2||glutathione S-transferase Gst2|Schizosaccharo... 62 8e-11
SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyce... 57 4e-09
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3... 32 0.12
SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr ... 28 1.5
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc... 28 2.0
SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr... 27 4.7
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 27 4.7
SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit S... 26 8.2
SPBC56F2.12 |ilv5||acetohydroxyacid reductoisomerase|Schizosacch... 26 8.2
>SPCC191.09c |gst1||glutathione S-transferase
Gst1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 229
Score = 63.7 bits (148), Expect = 3e-11
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Frame = +2
Query: 203 EQLKPEYLKLNPQHTVPTLVD---DGLSIWESRAIITYLVNKYAKGSSL-YPEDPKARAL 370
EQ PE+L LNP VPTL+D + +IWES AI+ YL +KY + P D
Sbjct: 40 EQKSPEHLALNPNGRVPTLIDHHNNDYTIWESDAILIYLADKYDTERKISLPRDHPEYYK 99
Query: 371 VDQRLYFDI---GTLYQRFSDY-FYPQVFAGAPADKAKNEKVQEALQLLDKFLEGQKYVA 538
V Q L+F G ++ + + Y Q + + +NE ++ L +L+ L+ + Y+
Sbjct: 100 VIQYLFFQASGQGIIWGQAGWFSVYHQELVISAITRYRNE-IKRVLGVLEDILKDRDYLV 158
Query: 539 GPNLTVADLSLIASVSSLE 595
T+ADLS I+ + LE
Sbjct: 159 ANRFTIADLSFISWNNFLE 177
>SPCC965.07c |gst2||glutathione S-transferase
Gst2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 62.5 bits (145), Expect = 8e-11
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 10/135 (7%)
Frame = +2
Query: 200 GEQLKPEYLKLNPQHTVPTLVD---DGLSIWESRAIITYLVNKY--AKGSSLYPEDPKAR 364
GEQ E+L LNP VPTLVD + +IWES AI+ YL +KY + SL +DP+
Sbjct: 39 GEQKCKEHLALNPNGRVPTLVDHKNNDYTIWESDAILIYLADKYDTDRKISLSFDDPEYY 98
Query: 365 ALVDQRLYFDI---GTLYQR--FSDYFYPQVFAGAPADKAKNEKVQEALQLLDKFLEGQK 529
L+ Q L+F G ++ + + ++F+ + A + +NE ++ L +L+ L+ +
Sbjct: 99 KLI-QYLFFQASGQGVIWGQAGWFNFFHHEPVVSA-VTRYRNE-IKRVLGVLEDILKDRD 155
Query: 530 YVAGPNLTVADLSLI 574
Y+ T+ADLS I
Sbjct: 156 YLVANKYTIADLSFI 170
>SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 242
Score = 56.8 bits (131), Expect = 4e-09
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 17/176 (9%)
Frame = +2
Query: 215 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFD 394
P Y KL+P P +VDDG++ ES AI+ +LV KY G S P + L L+
Sbjct: 40 PAYTKLSPLGKSPIVVDDGVTYIESAAILEHLVRKY--GPSFKPSEEDVAELEKYELWMH 97
Query: 395 IG--------------TLYQRFSDYFYPQV---FAGAPADKAKNEKVQEALQLLDKFLEG 523
L + F+ + F K +++ L +D L
Sbjct: 98 FSEASLMPFIWASHVLDLSVNMTPIFFRYIVRQFVNGIKSKYLSKETFLNLDYIDNHLAS 157
Query: 524 QKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETVKSTAPGYQEANEK 691
+Y AG T AD + + + + + K Y N+KRW V S P + A EK
Sbjct: 158 NEYFAGEQFTAADPQMCFPIFAAQRDYLSQKPYKNIKRWMRVV-SDRPACRIAAEK 212
>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 334
Score = 31.9 bits (69), Expect = 0.12
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Frame = +2
Query: 467 AKNEKVQEALQLLDKFLEGQ----KYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVK 634
A+ K+ +AL+ ++ E Q KY P L LS A+ S+ S + +
Sbjct: 116 AEKRKILDALKSRKEYFETQALLEKYGEQPTLAQKKLSNAAAAKSVPGSSSSSSDPMHPQ 175
Query: 635 RWYETVKSTAPGYQEANEKGLEA 703
WY+ V G E +E EA
Sbjct: 176 HWYDRVLEGLVGANENSENNREA 198
>SPBPB8B6.02c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -1
Query: 624 AYFLKSMSEASRLETLAMRLKSATVRFGPATYF*PSRNLSSS*RASWTFSFLALSAGAPA 445
A F M+ +++ T M + RF A+ S +SSS ++WT+ LS+GA +
Sbjct: 19 AAFALLMAIITKVLTACMGQTQNSERFSTASRSVKSGLISSSTVSAWTWPATLLSSGAWS 78
Query: 444 NTWG 433
T+G
Sbjct: 79 YTYG 82
>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 721
Score = 27.9 bits (59), Expect = 2.0
Identities = 34/118 (28%), Positives = 52/118 (44%)
Frame = +2
Query: 266 DGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFDIGTLYQRFSDYFYPQVF 445
+ LSI ESR I + ++ S L+P D K A + RL F +G + R + +
Sbjct: 263 NSLSI-ESRLTIANMTTEWGALSGLFPTDEKLLAWYEDRLKF-LGPNHPRVNRETLDAIK 320
Query: 446 AGAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKK 619
A +P +E A L+ V+GPN + + S ++LE DI KK
Sbjct: 321 A-SPI--LADEGAFYAKHLILDLSTLSPAVSGPN----SVKVYNSAATLEKKDILIKK 371
>SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 697
Score = 26.6 bits (56), Expect = 4.7
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Frame = -3
Query: 832 YKQRRFNSA*LVNFNSSDVILNKFSFRVD--------KCSLFKHAVDKSLECLQSFLVGL 677
+ +R F SA L +F SDV + FSFR + + FK + + LQS L
Sbjct: 563 FSRRLFQSALLYSFKVSDVDDSHFSFRSQILICWCYYRLNDFKSLIQHTNNLLQSNNASL 622
Query: 676 LVSRSCTLNRL 644
L + TL R+
Sbjct: 623 LRRLAATLYRI 633
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 626 NVKRWYETVKSTAPGYQEANEKGLEAFKGLVNS 724
+V + YE+++S Y+ ANEK EA +V+S
Sbjct: 739 SVHKNYESLRSQLLEYKAANEKHTEAILSVVSS 771
>SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit
Spo6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 8.2
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -3
Query: 721 VDKSLECLQSFLVGLLVSRSCTLNRLVPSLNVGVFLE 611
V+ S CLQS L G V + + VPS NV F E
Sbjct: 216 VNTSASCLQSLLDGEKVYGTSDKDFYVPSKNVEYFRE 252
>SPBC56F2.12 |ilv5||acetohydroxyacid
reductoisomerase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 25.8 bits (54), Expect = 8.2
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Frame = +2
Query: 452 APADKAKNEKVQEALQLLDKFLE--GQKYVAGPNLTVADLSLIA-SVSSLEASDIDFKK- 619
+PA+ A NE V+EA Q L + G Y+ T A I + LEA+ +
Sbjct: 291 SPAE-AFNETVEEATQSLYPLIGKYGLDYMFAACSTTARRGAIDWTPRFLEANKKVLNEL 349
Query: 620 YANVKRWYETVKS----TAPGYQEANEKGLEAFKGL 715
Y NV+ E +S +AP Y+E +K LE + L
Sbjct: 350 YDNVENGNEAKRSLEYNSAPNYRELYDKELEEIRNL 385
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,229,261
Number of Sequences: 5004
Number of extensions: 64045
Number of successful extensions: 239
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -