Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_P14
(882 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 67 2e-11
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 67 2e-11
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 62 4e-10
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 61 1e-09
03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884 55 7e-08
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 55 7e-08
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 55 9e-08
12_01_0674 + 5755523-5755613,5756325-5756366,5756830-5756915,575... 53 4e-07
11_02_0046 + 7711536-7711568,7711685-7711850,7712251-7712339,771... 53 4e-07
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 52 5e-07
03_01_0249 - 1935355-1935827,1936129-1936330 52 6e-07
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 49 4e-06
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 49 6e-06
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 46 5e-05
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 44 2e-04
03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049 44 2e-04
09_04_0448 + 17692650-17692970,17693461-17693811 43 4e-04
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 42 7e-04
03_01_0248 - 1932992-1933423,1933440-1933489,1933558-1933606,193... 42 7e-04
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 41 0.001
05_04_0304 - 20048518-20049003,20049074-20049412 38 0.011
01_07_0180 + 41832357-41832680,41833024-41833367,41833789-418339... 37 0.019
01_07_0182 + 41838805-41839152,41839230-41839610 37 0.025
10_08_0807 - 20712066-20712290,20712750-20713339,20713415-207134... 36 0.033
08_02_1570 + 27931057-27931367,27931486-27931550,27931763-279318... 36 0.033
03_04_0016 + 16461542-16461566,16462701-16462732,16463015-164631... 36 0.043
10_06_0125 + 11020726-11020785,11021872-11022198,11022589-11023041 36 0.057
07_03_1580 + 27888275-27888360,27888755-27888871,27888964-278890... 36 0.057
07_01_0489 + 3694562-3695269 35 0.099
03_06_0594 + 34950892-34951167,34952241-34952366,34952707-349530... 35 0.099
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 33 0.40
01_07_0183 + 41840089-41840394,41840869-41841249 33 0.40
10_02_0035 - 4429737-4429781,4430769-4430890,4431000-4431297,443... 32 0.70
11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436 31 1.6
06_01_0897 - 6903294-6903401,6903781-6903855,6904239-6904379,690... 31 1.6
02_02_0661 - 12731005-12731238,12732756-12732884,12732969-127331... 31 1.6
04_03_1007 - 21670780-21671368,21671477-21671685 29 4.9
04_01_0123 - 1283197-1283292,1283330-1284439,1284790-1285177,128... 29 4.9
02_01_0402 - 2934074-2937217 29 4.9
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937... 29 4.9
10_06_0046 - 10051197-10051610 29 6.5
10_07_0097 - 12837998-12838336,12839201-12839317,12839737-128398... 28 8.6
10_01_0110 + 1360699-1360873,1361301-1361524 28 8.6
09_06_0354 - 22490833-22491417 28 8.6
02_01_0403 - 2938242-2941334 28 8.6
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 66.9 bits (156), Expect = 2e-11
Identities = 51/158 (32%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Frame = +2
Query: 200 GEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQ 379
GE P++L NP VP L D L +WESRAI Y+ K K L D K A+VD
Sbjct: 39 GEHKAPDHLARNPFGQVPALQDGDLFLWESRAICKYVCRK-NKPELLKDGDLKESAMVDV 97
Query: 380 RLYFDIGTLYQRFSDYFY-----PQVFAGAPADKAKN---EKVQEALQLLDKFLEGQKYV 535
L + + + P +F P +K EK+++ L++ + L KY+
Sbjct: 98 WLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYL 157
Query: 536 AGPNLTVADLSLIASVSSLEASD--IDFKKYANVKRWY 643
AG ++VADLS +A L A+ Y +VK W+
Sbjct: 158 AGDYISVADLSHVAGTVCLGATPHASVLDAYPHVKAWW 195
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 66.9 bits (156), Expect = 2e-11
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Frame = +2
Query: 200 GEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY--AKGSSLYPEDPKARALV 373
GEQ PE+++ NP +P L D L ++ESRAI Y++ KY +K L D + ALV
Sbjct: 39 GEQNSPEHVERNPFGKIPALQDGDLVLFESRAIAKYILRKYKSSKVDLLRESDIREAALV 98
Query: 374 DQRLYFDIGTLYQRFSDYFYP----QVFAGAPADK----AKNEKVQEALQLLDKFLEGQK 529
D + Y S + + G P ++ EK+++ L+ + L G +
Sbjct: 99 DVWTEVEAHQYYPALSPIVFECIIFPIMRGVPTNQQVVHESLEKLKKVLETYEARLSGSR 158
Query: 530 YVAGPNLTVADLSLIASVSSLEASDID--FKKYANVKRWYETVKS 658
Y+AG L+ ADL+ A+ F Y +VK W+E + S
Sbjct: 159 YLAGDFLSFADLNHFPFTFYFMATPCASLFDAYPHVKAWWEGLMS 203
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 62.5 bits (145), Expect = 4e-10
Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Frame = +2
Query: 200 GEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKAR-ALVD 376
GE +P ++ NP VP D L+++ESRAI Y++ K+ GS L E + A+VD
Sbjct: 39 GEHKRPPHISRNPFGQVPAFEDGDLTLFESRAISKYILRKH--GSDLLRESNLSESAMVD 96
Query: 377 QRL-----YFDIGTLYQRFSDYFYPQVFAGAPADKAKNE---KVQEALQLLDKFLEGQKY 532
L +FD F + P GA NE K+++AL++ + L KY
Sbjct: 97 VWLEVESSHFDGAMSPIIFQCFIVPMFMGGATDIGVVNESLEKLKKALEVYEAQLSKSKY 156
Query: 533 VAGPNLTVADLSLIASVSSLEAS--DIDFKKYANVKRWYETV 652
+AG +++AD+S +V L AS + Y VK W + V
Sbjct: 157 LAGDFISLADISHFPTVYYLLASAHASVLEAYPRVKAWIDDV 198
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 61.3 bits (142), Expect = 1e-09
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 7/166 (4%)
Frame = +2
Query: 215 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFD 394
P+Y K+NP +P LVD L + +S AI YL +KY + +L P+D K +AL + ++
Sbjct: 42 PDYEKINPIKYIPALVDGDLVVSDSLAIALYLEDKYPQ-HALLPKDLKKKAL-NLQIANI 99
Query: 395 IGTLYQRFSDYFYPQVFAG--APADKAK--NEKVQEALQLLDKFLEGQ--KYVAGPNLTV 556
+ + Q Y + G +P + + + + + ++K LEG KY G + +
Sbjct: 100 VCSSIQPLQGYAVIGLHEGKLSPDESLQIVQHYIDKGFKAIEKLLEGSNFKYATGDEVQL 159
Query: 557 ADLSLIASV-SSLEASDIDFKKYANVKRWYETVKSTAPGYQEANEK 691
D+ L + + + ID KY N+ R ++T P +Q A K
Sbjct: 160 GDVFLAPQIHAGINRFQIDITKYPNLARLHDTYME-IPAFQAALPK 204
>03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884
Length = 225
Score = 55.2 bits (127), Expect = 7e-08
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 15/169 (8%)
Frame = +2
Query: 203 EQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSS--LYPEDPKARALVD 376
E PE++KL T ++ +SRAI YL ++ + +Y RA ++
Sbjct: 41 EHKLPEFIKLRDPTGQVTFKHGDKTLVDSRAICRYLSTQFPDDGNRTIYGTGSLERASIE 100
Query: 377 QRLYFDIGTLYQRFSDYFYPQVFA---GAPADKAK---NE-KVQEALQLLDKFLEGQKYV 535
Q L + + S+ + FA PAD+A+ NE K+Q+ L + D+ L KY+
Sbjct: 101 QWLQAEAQSFDAPSSELVFHLAFAPQLNIPADEARIAENERKLQQMLNVYDEILAKNKYL 160
Query: 536 AGPNLTVADLS------LIASVSSLEASDIDFKKYANVKRWYETVKSTA 664
AG T+ADLS I + S + F +V RWYE + + A
Sbjct: 161 AGDEFTLADLSHLPNSHYIVNARSPRGKKL-FTSKKHVARWYEEISNRA 208
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 55.2 bits (127), Expect = 7e-08
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Frame = +2
Query: 203 EQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY--AKGSSLYPEDPKARALVD 376
E PE+LK NP +P D L ++ESRA+ Y++ KY ++ + L + A+VD
Sbjct: 40 EHKSPEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEANLLREGNLTEAAMVD 99
Query: 377 QRLYFDIGTLYQRFSDYFYPQVF----AGAPADKA----KNEKVQEALQLLDKFLEGQKY 532
+ +I Y S Y +F G P ++ EK+++ L++ + L Y
Sbjct: 100 IGIEVEIHQYYPVISSIVYECLFNPAMYGVPTNQKVVDNSLEKLKKVLEVYEARLSQNTY 159
Query: 533 VAGPNLTVADLSLIASVSSLEASDID--FKKYANVKRWYE 646
+AG L+ DLS A+ KY +VK W++
Sbjct: 160 LAGNFLSFVDLSHFPFTFYFMATPYASLLDKYPHVKAWWD 199
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 54.8 bits (126), Expect = 9e-08
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Frame = +2
Query: 212 KPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY-AKGSSLYPEDPKARALVDQRLY 388
+P +L LNP +P L D ++ESRAI Y+ KY A+G+ L P + + A ++ L
Sbjct: 47 QPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYKAEGADLLPAE-ASPAKLEVWLE 105
Query: 389 FDIGTLYQRFSDYFY----PQVFAGAPADKAKNEKVQEALQLLDKF---LEGQKYVAGPN 547
+ Y S + + GA A +E Q+LD + L G +Y+AG
Sbjct: 106 VESHHFYPAISGLVFQLLIKPLLGGATDTAAVDEHAAALAQVLDVYDAHLAGSRYLAGNR 165
Query: 548 LTVAD---LSLIASVSSLEASDIDFKKYANVKRWYETVKS 658
++AD +S + +S +++ + +VK W++ + S
Sbjct: 166 FSLADANHMSYLLFLSKTPMAELVASR-PHVKAWWDDISS 204
>12_01_0674 +
5755523-5755613,5756325-5756366,5756830-5756915,
5757008-5757079,5757450-5757525,5757765-5757826,
5758119-5758178,5758293-5758394
Length = 196
Score = 52.8 bits (121), Expect = 4e-07
Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Frame = +2
Query: 215 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFD 394
P+Y K+NP VP LVD +I +S AII YL +KY + L P+D K +AL Q
Sbjct: 44 PDYGKINPIKYVPALVDGDFTISDSLAIILYLEDKYPQ-HPLLPQDLKKKALNMQ----- 97
Query: 395 IGTLYQRFSDYFYPQVFAGAPADKAKNEKVQEALQLLDKFLEG--QKYVAGPNLTVADLS 568
G + S Q+ + + ++K LEG KY G + +AD+
Sbjct: 98 -GLADGKMSANESLQIV---------QHYTDKGFRAIEKLLEGCRSKYATGDEVQLADVF 147
Query: 569 LIASV-SSLEASDIDFKKYANVKRWYETVKSTAPGYQEA 682
L + + + ID KY + R+Y+ P +Q A
Sbjct: 148 LAPQIHAGITRFQIDMSKYPILARFYKAYME-LPAFQAA 185
>11_02_0046 +
7711536-7711568,7711685-7711850,7712251-7712339,
7712443-7712514,7712807-7712860,7713000-7713075,
7713238-7713299,7713445-7713504,7713663-7713773
Length = 240
Score = 52.8 bits (121), Expect = 4e-07
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 8/168 (4%)
Frame = +2
Query: 203 EQLKPEYLKLNPQHTVPTLVD-DGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQ 379
EQ PE+ KLNP VP LVD D + +S AI+ YL + Y + L P+DPK +AL +
Sbjct: 62 EQSHPEFEKLNPMKYVPALVDGDDTVVVDSFAILLYLEDTYPQ-HPLLPQDPKMKAL-NI 119
Query: 380 RLYFDIGTLYQRFSDYFYPQVFAGAPADKAKNEKVQEALQ----LLDKFLEG--QKYVAG 541
++ +G+ Q + + K +Q L L+K L+G Y G
Sbjct: 120 QIASIVGSSIQPLQNNSVLDFIEEKLDSQEKVNWIQYHLNRGFTALEKMLKGCTTTYATG 179
Query: 542 PNLTVADLSLIASV-SSLEASDIDFKKYANVKRWYETVKSTAPGYQEA 682
+ + DL L + ++ ID Y + R +E P +Q A
Sbjct: 180 DEIQLGDLFLEPQIYGGIKRFGIDMTNYPTLARLHEAYME-HPAFQAA 226
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 52.4 bits (120), Expect = 5e-07
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Frame = +2
Query: 200 GEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPE--DPKARALV 373
G+ +PE+L NP +P L D L++++SRAI Y+ KY E + A+V
Sbjct: 39 GDHRRPEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKYKPEFLGLGEGGSLEESAMV 98
Query: 374 DQRLYFDIGTLYQRFSDYFYPQV---FAGAPADKA----KNEKVQEALQLLDKFLEGQKY 532
D L + + + F G D+ K+++ L + + L G +Y
Sbjct: 99 DVWLDVEAHQHEAAVRPILWHCIINKFEGRDRDQGVVDESVRKLEKVLGVYEARLSGSRY 158
Query: 533 VAGPNLTVADLSLIASVSSLEASDID--FKKYANVKRWYETV 652
+AG +++ADLS +++ A++ Y +VK W+E +
Sbjct: 159 LAGDRISLADLSHFSNMRYFMATEYAGVVDAYPHVKAWWEAL 200
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 52.0 bits (119), Expect = 6e-07
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 17/180 (9%)
Frame = +2
Query: 200 GEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSL----YPED-PKAR 364
GE P +LKL P VP D +++ESRAI Y+ ++YA + ED R
Sbjct: 40 GEHKSPSFLKLQPFGQVPAFKDSLTTVFESRAICRYICDQYADSGNKTLMGRKEDGAVGR 99
Query: 365 ALVDQRL-----YFDIGTLYQRFSDYFYPQVFAGAPADKA---KNE-KVQEALQLLDKFL 517
A +++ + F+ +L F F P F G D A +NE K+ + L + +++L
Sbjct: 100 AAIEKWIEAEGQSFNPPSLAMAFQLAFAP--FMGRATDMAVVEQNEAKLVKVLDVYEQWL 157
Query: 518 EGQKYVAGPNLTVADLSLIASVSSLEASDID---FKKYANVKRWYETVKSTAPGYQEANE 688
+Y AG ++ADL + + L F + N+ RW++ V S P +++ E
Sbjct: 158 GENQYFAGDEFSLADLVHMPNTDLLVRKTNKAGLFTERKNLARWWDEV-SARPSWKKVVE 216
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 49.2 bits (112), Expect = 4e-06
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 12/160 (7%)
Frame = +2
Query: 203 EQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY-AKGSSLYPE-DPKARALVD 376
E PE+LK NP +P D L ++ESRAI Y++ KY + + L E + + A+VD
Sbjct: 40 EHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVD 99
Query: 377 QRLYFDIGTLYQRFSDYFYPQV----FAGAPADK----AKNEKVQEALQLLDKFLEGQKY 532
+ S Y + G P ++ EK+++ L++ + L Y
Sbjct: 100 VWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTY 159
Query: 533 VAGPNLTVADLSLIASVSSLEASDID--FKKYANVKRWYE 646
+AG ++ ADL+ + F Y +VK W+E
Sbjct: 160 LAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWE 199
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 48.8 bits (111), Expect = 6e-06
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = +2
Query: 200 GEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARAL 370
GE PE++K+NP VP LVD I +S AI YL +KY + L P+D K +AL
Sbjct: 49 GEHSDPEFMKVNPMKFVPALVDGDAVIGDSYAIALYLEDKYPE-HPLLPQDLKMKAL 104
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 45.6 bits (103), Expect = 5e-05
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Frame = +2
Query: 200 GEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQ 379
GE +L +P +P D ++++ESRAI Y++ Y K L + + A+VD
Sbjct: 38 GENRSRHHLARSPFGKIPAFEDGEVTLFESRAIQRYVLRNYNKPDLLREGNLEESAMVDM 97
Query: 380 RL-----YFDIGTLYQRFSDYFYPQVFAGAPADKA---KN-EKVQEALQLLDKFLEGQKY 532
+ ++D ++ + + G D+A +N EK+++ L++ ++ L +Y
Sbjct: 98 WMEVEAHHYD-PAIFHIIRECVIKPMIGGGARDQAIVDENVEKLRKVLEVYERRLSESEY 156
Query: 533 VAGPNLTVADLS 568
+AG ++VADL+
Sbjct: 157 LAGDFVSVADLN 168
>01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 44.0 bits (99), Expect = 2e-04
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Frame = +2
Query: 203 EQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPE-DPKARALVDQ 379
E PE+ NP VP L D L ++ESRAI Y++ K S L E + A VD
Sbjct: 39 EHKSPEHTSRNPFGQVPALQDGDLILFESRAISKYVLRK--NNSELLKEHNLSDAAKVDV 96
Query: 380 RL-----YFDIGTLYQRFSDYFYPQVFAG---APADKAKNEKVQEALQLLDKFLEGQKYV 535
L +FD + P F G A + EK+++ Q+ ++ L +Y+
Sbjct: 97 WLEAESHHFDEPMSVVIYQCLILPVYFGGQTDAKVVEENLEKLKKTFQVYEERLCKFRYL 156
Query: 536 AGPNLTVADLS 568
AG L++ADLS
Sbjct: 157 AGDFLSLADLS 167
>03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049
Length = 319
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 194 HHGEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAK 328
+ G Q P+YLKL P T DD L++ ESR I+ ++ +KYA+
Sbjct: 39 YRGTQRMPQYLKLQPLGEALTFEDDNLTLSESRGILRHIAHKYAR 83
Score = 36.7 bits (81), Expect = 0.025
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +2
Query: 461 DKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEA---SDIDFKKYANV 631
+K+K + +++ L + ++ LE Y+AG T+ADLS + + L + S F+ NV
Sbjct: 192 EKSKKD-LEKLLDIYEQRLEEAAYLAGDKFTIADLSHLPNADRLASDPRSRRMFEARKNV 250
Query: 632 KRWYETVKS 658
RW+ + S
Sbjct: 251 SRWWNNISS 259
>09_04_0448 + 17692650-17692970,17693461-17693811
Length = 223
Score = 42.7 bits (96), Expect = 4e-04
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +2
Query: 224 LKLNP-QHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFDIG 400
L+ NP VP LV DG + ES I+ Y+ + G + P DP RA + F
Sbjct: 47 LRHNPVTKKVPVLVHDGKPLAESTVIVEYIDEAWKHGYPIMPSDPFDRA----QARFWAR 102
Query: 401 TLYQRFSDYFYPQVFAGAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADL 565
++ + YP + + Q+ L+ L+ LEG+K+ G D+
Sbjct: 103 FAEEKCNAALYPIFMTTGEEQRKLVHEAQQCLKTLETALEGKKFFGGDAFGYLDI 157
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 41.9 bits (94), Expect = 7e-04
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Frame = +2
Query: 215 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFD 394
PE+LK+NP +P L +++ES AI Y V + SSL + ++Q + F
Sbjct: 67 PEFLKMNPLGKIPVLETPEGAVFESNAIARY-VARLKDNSSLCGSSLIDYSHIEQWMDFS 125
Query: 395 IGTLYQRFSDYFYPQVFAG--APA-DKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADL 565
+ + YP++ G P ++ ++ +L L+ L Y+ G ++T+AD+
Sbjct: 126 ATEVDANIGRWLYPRLGFGPYVPVLEEFAITSLKRSLGALNTHLASNTYLVGHSVTLADI 185
Query: 566 SLIASV 583
+ ++
Sbjct: 186 VMTCNL 191
>03_01_0248 -
1932992-1933423,1933440-1933489,1933558-1933606,
1933688-1933840
Length = 227
Score = 41.9 bits (94), Expect = 7e-04
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = +2
Query: 467 AKNEK-VQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYA---NVK 634
A+NEK +Q+ L + D+ L +Y+AG T+ADLS + + + +S+ K + NV
Sbjct: 141 AENEKKLQQVLNVYDEILSKNEYLAGDEFTLADLSHLPNSHYIVSSERGRKLFTGRKNVA 200
Query: 635 RWYETV 652
RWY+ +
Sbjct: 201 RWYDQI 206
>02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Frame = +2
Query: 215 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYL--------VNKYAKGSSLYPEDPKARAL 370
PEYLK+NP VP L ++ES AI Y+ V + + LY A
Sbjct: 604 PEYLKMNPIGKVPILETPDGPVFESNAIARYVLSSSHFPEVTRSKSDNPLYGSSLIEYAH 663
Query: 371 VDQRLYFDIGTLYQRFSDYFYPQV-FAG--APADKAKNEKVQEALQLLDKFLEGQKYVAG 541
++Q + F + + +P++ FA A +++A ++ +L L+ L Y+ G
Sbjct: 664 IEQWIDFSATEVDANTGKWLFPRLGFAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVG 723
Query: 542 PNLTVADLSLIASV 583
++T+AD+ + ++
Sbjct: 724 HSVTLADIVMTCNL 737
Score = 38.3 bits (85), Expect = 0.008
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 11/134 (8%)
Frame = +2
Query: 215 PEYLKLNPQHTVPTLVDDGLSIWESRAIITYL--------VNKYAKGSSLYPEDPKARAL 370
PE+LK+NP +P L ++ES AI Y+ V + + LY A
Sbjct: 43 PEFLKMNPIGKIPVLETPDGPVFESNAIARYVLSHCHFPEVTRSKADNPLYGSSLIEYAH 102
Query: 371 VDQRLYFDIGTLYQRFSDYFYPQVFAG---APADKAKNEKVQEALQLLDKFLEGQKYVAG 541
++Q F + + YP++ A +++A ++ +L L+ L Y+ G
Sbjct: 103 IEQWNDFSATEVDANIGKWLYPRLGIAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVG 162
Query: 542 PNLTVADLSLIASV 583
++T+AD+ + ++
Sbjct: 163 HSVTLADIVMTCNL 176
>05_04_0304 - 20048518-20049003,20049074-20049412
Length = 274
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 224 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARAL 370
L+LNP H VP LV G + ES I+ YL + + + L P DP RAL
Sbjct: 53 LRLNPVHKKVPVLVHRGRPLAESVIILQYLDDAWPESRPLLPSDPFDRAL 102
>01_07_0180 +
41832357-41832680,41833024-41833367,41833789-41833945,
41834119-41834430,41834537-41834908
Length = 502
Score = 37.1 bits (82), Expect = 0.019
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +2
Query: 224 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYFDIG 400
L NP H VP L+ S+ ES I+ Y+ + G + P DP RA+ F I
Sbjct: 320 LNHNPVHKLVPVLLHGDRSLSESLVILEYIDESF-HGPPILPTDPYDRAVARFWAQF-ID 377
Query: 401 TLYQRFSDYFYPQVFAGAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLS 568
+ RF +++ P V + +E L LL+ L+G+++ G + D++
Sbjct: 378 QKFGRF-NFWIPFVQMEGNMQDCFVREAKENLALLEGQLKGRRFFGGDAIGFLDIA 432
>01_07_0182 + 41838805-41839152,41839230-41839610
Length = 242
Score = 36.7 bits (81), Expect = 0.025
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Frame = +2
Query: 224 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRLYF--- 391
L NP H VP L+D G +I ES I+ Y+ + + G + P DP RA F
Sbjct: 45 LASNPVHKKVPVLLDGGRAICESLVIVEYVDDAF-DGPPILPADPYDRATARFWAQFIDH 103
Query: 392 --DIGTLYQRFSDYFYPQVFA---GAPADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTV 556
++ L P + A K ++ +E L LL+ LEG+++ AG +
Sbjct: 104 KANLFMLLHHCVHCTLPLLLALWLDGEEQKGFLKETKENLSLLEAQLEGKRFFAGDAVGY 163
Query: 557 ADLS 568
D++
Sbjct: 164 LDVA 167
>10_08_0807 -
20712066-20712290,20712750-20713339,20713415-20713463,
20713669-20713821
Length = 338
Score = 36.3 bits (80), Expect = 0.033
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 200 GEQLKPEYLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKY 322
G + P+YLKL P T D +++ ESR II ++ +KY
Sbjct: 40 GSKRMPQYLKLQPHGEALTFEDGNVTLVESRKIIRHIADKY 80
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +2
Query: 473 NEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFK---KYANVKRWY 643
++++ + L + ++ LE +Y+AG T+ADLS + + L A + NV RW+
Sbjct: 194 SKELSKVLDIYEQRLEEAEYLAGDKFTLADLSHLPNADRLAADPRTLRMLQSRRNVSRWW 253
Query: 644 ETV 652
V
Sbjct: 254 ADV 256
>08_02_1570 +
27931057-27931367,27931486-27931550,27931763-27931841,
27931992-27932010,27932091-27932210,27932557-27932626,
27932709-27932752,27932918-27932959,27933033-27933092,
27933413-27933470,27934718-27935376
Length = 508
Score = 36.3 bits (80), Expect = 0.033
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +2
Query: 197 HGEQLKPEYLKLNPQHTVPTLVDD--GLSIWESRAIITYLVNKYAKGS 334
+G +P+ L++ + P +VD G++++ES AII YL +KY G+
Sbjct: 178 NGPTFRPKVLEMGGKQQFPYMVDPNTGVAMYESDAIIKYLADKYGDGT 225
>03_04_0016 +
16461542-16461566,16462701-16462732,16463015-16463100,
16463189-16463305,16463399-16463474,16463695-16463818,
16464482-16464595,16464700-16464947
Length = 273
Score = 35.9 bits (79), Expect = 0.043
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 473 NEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETV 652
N + LQ LD++L + Y++G + D+++ S+ S A+ Y NV RWY+ +
Sbjct: 26 NVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAAS-----YVNVTRWYDHI 80
Query: 653 KS 658
+
Sbjct: 81 SA 82
>10_06_0125 + 11020726-11020785,11021872-11022198,11022589-11023041
Length = 279
Score = 35.5 bits (78), Expect = 0.057
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 224 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKY--AKGSSLYPEDP 355
L NP H VP L+ +G I ESR I+ Y++++ G++L P DP
Sbjct: 67 LASNPVHKKVPVLIHNGKPICESRIILEYIIDEVFPVDGAALLPADP 113
>07_03_1580 +
27888275-27888360,27888755-27888871,27888964-27889045,
27889710-27889821,27889958-27890071,27890163-27890326
Length = 224
Score = 35.5 bits (78), Expect = 0.057
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 488 EALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETV 652
+ L+ L++ L G+ YV+G ++ D+ + A+V S ++ + N RWY+TV
Sbjct: 12 DGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAE-----FPNAARWYDTV 61
>07_01_0489 + 3694562-3695269
Length = 235
Score = 34.7 bits (76), Expect = 0.099
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +2
Query: 224 LKLNPQHT-VPTLVDDGLSIWESRAIITYLVNKY---AKGSSLYPEDPKARAL 370
L NP H VP L+ I ES+ I+ YL + + A G L P DP ARA+
Sbjct: 54 LASNPVHKKVPVLLHRSNPICESQVIVQYLDDAFPGGAAGGDLLPSDPHARAV 106
>03_06_0594 +
34950892-34951167,34952241-34952366,34952707-34953018,
34954005-34954133,34954259-34954660
Length = 414
Score = 34.7 bits (76), Expect = 0.099
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -3
Query: 448 GKYLGIEIITESLVQSSDVEIQPLVNESTSFGVFG--VQTAAFGVLVHQVGDDGAGLPD 278
G Y + + ES++ ++V + P+ + FG + + A FG+ V G+DG G+ +
Sbjct: 314 GMYAHAKAVAESMLGEANVTVSPMCMGAEDFGFYAQRIPAAFFGIGVGSNGNDGGGMAE 372
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 32.7 bits (71), Expect = 0.40
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +2
Query: 491 ALQLLDKFLEGQKYVAGPNLTVADLSL---IASVSSLEASDIDFKKYANVKRWYETVKST 661
A +D +L + ++ G LT+AD+++ +A + S KKY N+ RW+ + S
Sbjct: 96 ACSFVDGYLMSRTFLVGHVLTIADITVWSNLAGIGQRWESLRKSKKYQNLVRWFNGIDS- 154
Query: 662 APGYQEANEKGLEAFKG 712
Y++ + + A+ G
Sbjct: 155 --DYKDTLNEVIAAYVG 169
>01_07_0183 + 41840089-41840394,41840869-41841249
Length = 228
Score = 32.7 bits (71), Expect = 0.40
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 233 NPQHT-VPTLV-DDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARA 367
NP H VP L+ DG S+ ES ++ Y+ + + G L P DP ARA
Sbjct: 45 NPVHKLVPVLLHSDGRSVAESLVVVQYVDDAF-HGPPLLPADPYARA 90
>10_02_0035 -
4429737-4429781,4430769-4430890,4431000-4431297,
4431644-4431682
Length = 167
Score = 31.9 bits (69), Expect = 0.70
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 445 CRCPSRQSQEREGPGSPSAAGQVPRRSEVRGRTEPHRRRLESHRQCLQPGS 597
C +R S +R+G +P +G RRS GR + R+ E C QP S
Sbjct: 48 CGAAARGSSDRQGAAAPRGSGVEQRRSGWPGR-QARGRQQEEQVSCEQPRS 97
>11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436
Length = 79
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 203 EQLKPEYLKLNPQHTVPTLVDDGLSIWE 286
E L PE+ K+NP VP +VD ++E
Sbjct: 41 EHLSPEFKKINPMGQVPAIVDGRFRLFE 68
>06_01_0897 -
6903294-6903401,6903781-6903855,6904239-6904379,
6904496-6904646,6905035-6905178,6905276-6905366,
6906071-6906308
Length = 315
Score = 30.7 bits (66), Expect = 1.6
Identities = 33/158 (20%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Frame = +2
Query: 212 KPE-YLKLNPQHTVPTLVDDGLSIWESRAIITYLVNKYAKGS-SLYPEDPKARALVDQRL 385
KP+ +LK++P+ VP + + + +S I + KY + S + PE +
Sbjct: 107 KPDWFLKISPEGKVPIVKLEEQWVADSDVITQAIEEKYPEPSLATPPEKASVILTIGNNF 166
Query: 386 YFDIGTLYQRFSDYFYPQVFAGAPADKAKNEKVQEALQLLDKFL-EGQKYVAGPNLTVAD 562
+ ++ F + + P D + + E L D +L + ++ G ++ AD
Sbjct: 167 LYSGSKIFSTFIGFLKSK----DPNDGTEQALLSE-LTSFDSYLKDNGPFINGETISAAD 221
Query: 563 LSLIASVSSLEASDIDFKKY------ANVKRWYETVKS 658
LSL + +E + +K + ++VK++ +T+ S
Sbjct: 222 LSLAPKLYHMEIALGHYKNWSVPDSLSHVKKYMKTIFS 259
>02_02_0661 -
12731005-12731238,12732756-12732884,12732969-12733193,
12733302-12733478,12733576-12733788
Length = 325
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 455 PADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSL-EASDIDFKKYANV 631
P D+A ++ EAL ++ L Q+Y+ G LT AD+ L ++ E + FK +
Sbjct: 202 PYDEAVT-RLYEALDKCEEILSRQRYICGNQLTEADVRLFVTLIRFDEVYAVHFKCNKRL 260
Query: 632 KRWY 643
R Y
Sbjct: 261 LREY 264
>04_03_1007 - 21670780-21671368,21671477-21671685
Length = 265
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +2
Query: 464 KAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVK--- 634
K E++ + L ++ L KY+AG + AD I ++ + D+D ++Y N +
Sbjct: 161 KQSEEELSKLLDDVEAQLNNGKYLAGDEFSPADSVFIPILARITLLDLD-EEYINCRPRL 219
Query: 635 RWYETVKSTAPGYQEANEKGLEAFK 709
Y T+ P Y+ A K +K
Sbjct: 220 LEYYTLVKQRPSYKVAIGKFFGGWK 244
>04_01_0123 -
1283197-1283292,1283330-1284439,1284790-1285177,
1285523-1287609
Length = 1226
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 142 ADGEGAQLKPEPQTGRPTPRGTAQTRIFEVEPSTHGPDPSRRWSFNLGVPRHH 300
A+GE + + PQ P PRGT R +G +RR N+ R H
Sbjct: 266 ANGEDPERRESPQRATPPPRGTGDLR-----DQINGRQEARRTRDNVNRSRRH 313
>02_01_0402 - 2934074-2937217
Length = 1047
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/16 (62%), Positives = 13/16 (81%), Gaps = 2/16 (12%)
Frame = -2
Query: 344 GTDCCLWR--TCSPSR 303
GTDCC+W TC+P+R
Sbjct: 65 GTDCCVWEGITCNPNR 80
>01_01_1176 -
9372879-9373097,9373814-9374278,9374372-9375447,
9375534-9375687,9375783-9375879,9376238-9376374
Length = 715
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 485 QEALQLLDKFLEGQKYVAGPNLTVADL---SLIASVSSLEASDIDFKKYANVKRWYETV 652
+ A LD +L + ++ L++AD+ S +A S KKY N+ RW+ ++
Sbjct: 96 EAACSFLDGYLASRTFLVSYGLSIADIVVWSNLAGTGQRWESLRRSKKYQNLVRWFNSI 154
>10_06_0046 - 10051197-10051610
Length = 137
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 127 LQGCTADGEGAQLKPEPQTGRPTP 198
++GCT + G Q+ P P T PTP
Sbjct: 21 VRGCTPNCSGEQVVPTPPTAVPTP 44
>10_07_0097 -
12837998-12838336,12839201-12839317,12839737-12839868,
12840656-12840907
Length = 279
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 251 PTLVDDGLSIWESRAIITYLVNKYAKGSSLYPEDPKARALVDQRL 385
PT+++D L ++ + L N ++ +YP DPKA+ VD L
Sbjct: 160 PTVMED-LQALKAAGEVWLLSNMDSQEDIVYPNDPKAKIKVDDDL 203
>10_01_0110 + 1360699-1360873,1361301-1361524
Length = 132
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 454 PSRQSQEREGPGSPSAAGQVPRRSEVRGRTEPHRRRLESHRQCL 585
P Q + R +G+ R V+GR P RR+ E HR+ L
Sbjct: 23 PEAQEESRAVAAEAHCSGRRLGRCRVQGRASPQRRQ-EPHRRAL 65
>09_06_0354 - 22490833-22491417
Length = 194
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 463 QSQEREGPGSPSAAGQVPRRSEVRGRTEPHRRR 561
QSQE + P P AA ++ GR RRR
Sbjct: 67 QSQETQDPNEPKAAAAKKKKRAGHGRKRSRRRR 99
>02_01_0403 - 2938242-2941334
Length = 1030
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 2/16 (12%)
Frame = -2
Query: 344 GTDCCLWR--TCSPSR 303
GTDCC W TC+P+R
Sbjct: 49 GTDCCAWEGITCNPNR 64
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,777,864
Number of Sequences: 37544
Number of extensions: 461270
Number of successful extensions: 1534
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -