Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_P12
(510 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0310 + 16578679-16580936,16581027-16581294 30 0.94
01_03_0131 - 12858377-12858664,12859585-12859975,12863357-128633... 29 2.2
09_04_0193 - 15492102-15492746,15492833-15492946,15493042-154933... 29 2.9
07_03_0676 + 20618677-20618840,20618938-20619502 29 2.9
05_05_0343 - 24234026-24234235,24234254-24234502,24234642-242349... 29 2.9
03_06_0133 - 31906305-31906582,31906820-31907105,31907442-319075... 29 2.9
10_06_0152 - 11280532-11281427,11281501-11281971,11282512-11282569 28 3.8
09_04_0559 + 18516732-18516746,18516893-18517330 28 5.0
09_04_0167 + 15290059-15290188,15290779-15292070 27 6.6
03_01_0331 - 2609012-2609365,2609579-2609920,2610009-2610257,261... 27 6.6
02_05_1285 - 35452249-35452604,35452702-35452789,35452908-354535... 27 6.6
02_03_0411 - 18739279-18739902,18741471-18741671 27 6.6
01_01_0709 - 5489623-5490360 27 6.6
10_07_0034 - 12163944-12164537 27 8.8
09_01_0004 - 133130-133897 27 8.8
08_02_1038 - 23862936-23863359,23863489-23863661 27 8.8
07_03_0675 + 20611460-20612053 27 8.8
03_06_0337 + 33224333-33224479,33224603-33224663,33224740-332247... 27 8.8
03_02_0779 + 11126509-11126892 27 8.8
01_05_0680 - 24238840-24241242 27 8.8
>09_04_0310 + 16578679-16580936,16581027-16581294
Length = 841
Score = 30.3 bits (65), Expect = 0.94
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +3
Query: 294 REAPAPVPTEAALAQRLERELRAAKGASELATAEVLVPAELLARASRQTL 443
R APA +P E ALA+ ++R L AA G + A A + A+L AR+ +L
Sbjct: 43 RLAPAVLPDEHALAESVKRRL-AASGRPDDALAFADLHAKLSARSRPASL 91
>01_03_0131 -
12858377-12858664,12859585-12859975,12863357-12863397,
12864745-12865419
Length = 464
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = +2
Query: 365 QRSQRARHRGGLSAGGAAREGVAADPRAXGGRALWVP 475
+RS R R GG+ GG G AADP A GG A P
Sbjct: 154 RRSSRGRSGGGVRGGG---RGAAADP-AMGGAATAFP 186
>09_04_0193 -
15492102-15492746,15492833-15492946,15493042-15493332,
15493412-15493720,15493815-15494552
Length = 698
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -3
Query: 292 HVGPLHAFSLLNPTLN*LVTGRISMFSKFLLILYTFRYEKI 170
H GP+H F L P ++T +IS + K LIL F K+
Sbjct: 466 HSGPMHLFRLCLPD---ILTAKISSWKKANLILLFFLLRKL 503
>07_03_0676 + 20618677-20618840,20618938-20619502
Length = 242
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2
Query: 344 RERTTSGQRSQRARHRGGLSAGGAAREGVAADPRAXGGRALWVPG 478
RER + G R++R RGG G A AA R+ R L G
Sbjct: 186 RERASGGHRAKRRAGRGGGGGGDAGGGDGAAGARSRRHRRLEAAG 230
>05_05_0343 -
24234026-24234235,24234254-24234502,24234642-24234959,
24235111-24235371,24235457-24235534,24235834-24236262
Length = 514
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -3
Query: 508 RPATSMMTXAPRDPQGSPSXSARVCRDALASSSAGTK 398
+PA S+ A DP+ + ++R CR A +SSS GT+
Sbjct: 40 QPARSLAFAAAADPRLATHVASR-CRQAASSSSRGTR 75
>03_06_0133 -
31906305-31906582,31906820-31907105,31907442-31907566,
31907645-31907759,31907852-31908485,31911425-31911555,
31912308-31912397,31912440-31912486,31913707-31913761,
31914576-31914908,31915278-31915337,31915427-31915618,
31916149-31916220,31916307-31916435
Length = 848
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 338 EARERTTSGQRSQRARHRGGLSAGGAAREGVAA 436
EAR+ T G + GG++ G AA GVAA
Sbjct: 454 EARQAATQGGAPEGGADAGGVAPGAAAAGGVAA 486
>10_06_0152 - 11280532-11281427,11281501-11281971,11282512-11282569
Length = 474
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 344 RERTTSGQRSQRARHRGGLSAGGAAREGVAADPRAXGGRALWVP 475
R + +R++R GG AGG A + PR GGR L VP
Sbjct: 93 RSEERAARRARRPGQDGG--AGGLAGGRLGGLPRPRGGRLLLVP 134
>09_04_0559 + 18516732-18516746,18516893-18517330
Length = 150
Score = 27.9 bits (59), Expect = 5.0
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = +3
Query: 219 MEILPVTNQFNVGFNSEKAWSGPTWREAPAPVPTEAALAQRLERELRAAKGASELATAEV 398
+E P V E+ + P A P EA +A+ E E AA+ A+E
Sbjct: 19 VEATPAAAAAEVEAPKEETPAAPAEAVAEEAAPAEAEVAETKEAEPAAAEPAAEEVKEAE 78
Query: 399 LVPAELLARASRQTLA 446
PAE A +++ +A
Sbjct: 79 PEPAEPEAEPAKEEVA 94
>09_04_0167 + 15290059-15290188,15290779-15292070
Length = 473
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 344 RERTTSGQRSQRARHRGGLSAGGAAREGVAADPRAXGG 457
R R SG RH GG GG+ + G + GG
Sbjct: 42 RSRAESGATILELRHHGGGGGGGSGKSGGRSREEELGG 79
>03_01_0331 -
2609012-2609365,2609579-2609920,2610009-2610257,
2610748-2610750
Length = 315
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 383 RHRGGLSAGGAAREGVAADPRAXGGRA 463
R R G + G AAR GVAA R G+A
Sbjct: 7 RERPGGTGGQAARRGVAARRRGGAGKA 33
>02_05_1285 -
35452249-35452604,35452702-35452789,35452908-35453588,
35453639-35453749,35454012-35454047
Length = 423
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 180 YLKVYNISKNLENMEILPVTNQFNVGFNSEKAWSGPTWREAPAPV 314
Y KV+ +S L N+ P + ++ F SEK W P + APV
Sbjct: 249 YQKVFRLSHFLANV---PNISNLHLSFASEKIWVKPECPKLLAPV 290
>02_03_0411 - 18739279-18739902,18741471-18741671
Length = 274
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 335 PEARERTTSGQRSQRARHRGGLSAGGAA 418
P +R ++S +R RAR RGG GGAA
Sbjct: 96 PASRSASSSSRRCSRARGRGG--GGGAA 121
>01_01_0709 - 5489623-5490360
Length = 245
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 335 PEARERTTSGQRSQR-ARHRGGLSAGGAAREGVAADPRAXGGR 460
P R +GQR R AR RG +AGG + V D GGR
Sbjct: 5 PGDGRRGATGQRETRHARRRGLTAAGGGVGDDVGDDAET-GGR 46
>10_07_0034 - 12163944-12164537
Length = 197
Score = 27.1 bits (57), Expect = 8.8
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Frame = +2
Query: 344 RERTTSGQRSQRARHR---GGLSAGG----AAREGVAADPRAXGGR 460
RER + G R++R R GG AGG A R V A A GGR
Sbjct: 123 RERASGGHRAKRRAGRGGGGGGDAGGGDGAAGRRTVEAAQAAGGGR 168
>09_01_0004 - 133130-133897
Length = 255
Score = 27.1 bits (57), Expect = 8.8
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Frame = +2
Query: 344 RERTTSGQRSQRARHR---GGLSAGG----AAREGVAADPRAXGGR 460
RER + G R++R R GG AGG A R V A A GGR
Sbjct: 181 RERASGGHRAKRRAGRGGGGGGDAGGGDGAAGRRTVEAAQAAGGGR 226
>08_02_1038 - 23862936-23863359,23863489-23863661
Length = 198
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 333 AQRLERELRAAKGASELATAEVLVPAELLARASRQTLALXEGEPCGSRGA 482
A+ E +L AA GAS + +LV ++ A R+ + + E E G RGA
Sbjct: 99 AREAEEKLAAA-GASNGELSALLVRDSVVLSAHRRWVMMLEAENSGLRGA 147
>07_03_0675 + 20611460-20612053
Length = 197
Score = 27.1 bits (57), Expect = 8.8
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Frame = +2
Query: 344 RERTTSGQRSQRARHR---GGLSAGG----AAREGVAADPRAXGGR 460
RER + G R++R R GG AGG A R V A A GGR
Sbjct: 123 RERASGGHRAKRRAGRGGGGGGDAGGGDGAAGRRTVEAAQAAGGGR 168
>03_06_0337 +
33224333-33224479,33224603-33224663,33224740-33224776,
33225237-33225367,33225447-33225590,33225686-33225776,
33225973-33226106,33226234-33226373,33227328-33227426,
33227520-33227602,33227690-33227744,33227826-33227937,
33228274-33228766,33228881-33229094,33229203-33229273,
33229733-33229901,33229991-33230120,33230556-33230968,
33231059-33231262
Length = 975
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 362 GQRSQRARHRGGLSAGGAAREGVAADPRAXGGRA 463
G+R QR GG GGAA EG AA GG +
Sbjct: 2 GKRKQRG---GGGGGGGAATEGGAATGGGAGGHS 32
>03_02_0779 + 11126509-11126892
Length = 127
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 338 EARERTTSGQRSQRARHRGGLS-AGGAAREGVAADPR 445
E +R G+ S +A S AGG+ R GV DPR
Sbjct: 39 EEEDRRMKGRHSGKAAAAAARSMAGGSERGGVVEDPR 75
>01_05_0680 - 24238840-24241242
Length = 800
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 186 KVYNISKNLENMEILPVTNQFNV---GFNSEKAW 278
K Y + + + + +LP TN+FN+ G ++K W
Sbjct: 335 KAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,636,132
Number of Sequences: 37544
Number of extensions: 181662
Number of successful extensions: 848
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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