Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_P11
         (817 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   3.8  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    23   3.8  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   6.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.9  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 590 SMSPTPPMHFAQQV 631
           S +PTPP H+  Q+
Sbjct: 142 STNPTPPPHYTYQI 155


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 289 LKVRCQSRHYLSF 251
           L  RCQ RHY S+
Sbjct: 114 LPERCQQRHYYSY 126


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 355 PGVLLAQPADLRAEFLLLCLD 293
           P V     ADLR+ F  LC D
Sbjct: 158 PRVSAQMKADLRSHFRALCQD 178


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 247 GRSSGNDGSGISPSVRRGREAKTPHAGPQAVP 342
           G +SG+D    SPS    ++ +  +  PQ  P
Sbjct: 56  GVTSGSDFHSSSPSSDTSQDLQHSYQSPQTQP 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,253
Number of Sequences: 336
Number of extensions: 3298
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)