Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_P11
(817 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 30 0.098
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 28 0.40
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 26 1.2
AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific do... 26 1.6
AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doub... 26 1.6
AY341429-1|AAR03495.1| 193|Anopheles gambiae sulfakinin preprop... 25 2.1
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 24 4.9
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 24 6.4
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 24 6.4
AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription fact... 24 6.4
AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein. 23 8.5
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 8.5
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 29.9 bits (64), Expect = 0.098
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = +2
Query: 182 TEHENEKASLVKKSIEAIDLGLGEAQVMTALASHLQSVEAEKQKLRTQVRRLCQENAWLR 361
TE NE + K ++ GLG+ + L++++ + E + V++ + +
Sbjct: 884 TEQINEITNSKVKVLQTKINGLGKQ--IDKLSANISKLTVEIKTSERNVQKSKDKINSME 941
Query: 362 DELAAAQQHLQASEQRVAQLEEE-NKHLEFMASIRKYDSDINEESDS 499
DE+ AAQ ++ QLEEE NK E + ++ +E S S
Sbjct: 942 DEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHEGSSS 988
Score = 25.8 bits (54), Expect = 1.6
Identities = 26/93 (27%), Positives = 43/93 (46%)
Frame = +2
Query: 2 SEIKIAVLLSSYLERKKIESLGRMTAMTQEEMVAGARTVAAGLEALRAEHTQLLAGLATN 181
SE+KI ER+K+ESL T++++ + EAL T+L
Sbjct: 492 SELKICQH-DEVTERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKL 550
Query: 182 TEHENEKASLVKKSIEAIDLGLGEAQVMTALAS 280
E+ NE+ L +++ A+ L E+ M A+ S
Sbjct: 551 QENANEERELT-QTLRAVQGKLQES--MAAMQS 580
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 27.9 bits (59), Expect = 0.40
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -3
Query: 584 YSCCRRGHHQGTARPSGPRVSSRPDLYGYCP 492
Y R HH P P + P+LYG P
Sbjct: 400 YQMLRASHHSAAGHPLYPSLPYPPNLYGMLP 430
Score = 26.2 bits (55), Expect = 1.2
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +1
Query: 247 GRSSGNDGSGISPSVRRGREAKT---PHAGPQAVPRERLAEGRAGC 375
G ++G+G SPS RR +T P G + + R +A G C
Sbjct: 11 GEKEDSEGTGTSPSYRRLPNDETRVHPGGGVRGLARIHVAAGFGSC 56
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 26.2 bits (55), Expect = 1.2
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +2
Query: 47 KKIESLGRMTAMTQEEMVAGARTVAAGLEALRAEHTQLLAGLATNTEHENEKASLVKKSI 226
KKIES QE+++ +T GLE E ++ A L+ + E+ ++ +
Sbjct: 432 KKIESEKNEALKRQEKLIDHIKTSRLGLE----EQKRIKAELSQDVGTSKERIHELQSEL 487
Query: 227 EAIDLGLGEAQV 262
+ + LG+A++
Sbjct: 488 DNVREQLGDAKI 499
>AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific
doublesex protein protein.
Length = 241
Score = 25.8 bits (54), Expect = 1.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 643 RDPGPPAHAPQPRH 684
R PG P H P+P+H
Sbjct: 136 RSPGVPHHVPEPQH 149
>AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific
doublesex protein protein.
Length = 283
Score = 25.8 bits (54), Expect = 1.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 643 RDPGPPAHAPQPRH 684
R PG P H P+P+H
Sbjct: 136 RSPGVPHHVPEPQH 149
>AY341429-1|AAR03495.1| 193|Anopheles gambiae sulfakinin
preproprotein protein.
Length = 193
Score = 25.4 bits (53), Expect = 2.1
Identities = 20/77 (25%), Positives = 27/77 (35%), Gaps = 2/77 (2%)
Frame = +2
Query: 374 AAQQHLQASEQRVAQLEEENKHLEFMASIRKYDSDINEESDSNRTGQGEK--KREDPMVE 547
A HLQ QR+ + RKY I RT QG + +R +
Sbjct: 52 ATINHLQQQHQRLKDTNVYRARSKMRPHDRKYPGVIGAYEAYRRTVQGPQLMQRNPATAD 111
Query: 548 LFPDDDHDDNRNNKSMS 598
F DD D ++ S
Sbjct: 112 RFADDPGVDEQDQMRFS 128
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 24.2 bits (50), Expect = 4.9
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Frame = +2
Query: 251 EAQVMTALASHLQSVEAEKQKLRTQVRRLCQENA-WLRDELAAAQQHLQAS------EQR 409
+ Q L + L +V+ EK K R + ++ R ++AA +++ AS EQR
Sbjct: 676 QEQKCKELTARLVNVDEEKVKFERSCRTIIEQLLDQQRRKVAALERYAAASREHDLLEQR 735
Query: 410 VAQLEEENKHLE 445
+ EE N E
Sbjct: 736 IRLFEERNNDRE 747
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.8 bits (49), Expect = 6.4
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +2
Query: 470 DSDINEESDSNRTGQ----GEKKREDPMVELFPDDDHDDNRNNKSMS 598
+SDI+++ S R + G KKR + P+ + D NN+ ++
Sbjct: 505 ESDIDDDCRSPRLDRKRKTGTKKRNPSSNDRSPNQNSDSTENNEDLA 551
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.8 bits (49), Expect = 6.4
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = +2
Query: 452 ASIRKYDSDIN----EESD--SNRTGQGEKKREDPMVELFPDDDHDD 574
ASI+ Y S N +ES S T +GE+KR+ +L D++ DD
Sbjct: 1191 ASIKSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGIDEELDD 1237
>AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription factor
protein.
Length = 391
Score = 23.8 bits (49), Expect = 6.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 398 KPAGAAELQPARPSARRSLGT 336
+P AE +PA+ S RR +GT
Sbjct: 66 EPISDAEEEPAKGSKRRKVGT 86
>AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein.
Length = 753
Score = 23.4 bits (48), Expect = 8.5
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 8 IKIAVLLSSYLERKKIESLGRMTAMTQEEMVAGARTVAAGLEALRAEHTQLLAGLA 175
IK+ L +L+ + + + + A Q +VAG V A R+ HT L+ A
Sbjct: 638 IKVFDLRQCHLQMQSLANCAQKAAQMQAAVVAGVSAVGAP----RSMHTTSLSAAA 689
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 23.4 bits (48), Expect = 8.5
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 254 AQVMTALASHLQSVEAEKQKLRTQVRRLCQENAWLRDE 367
A V + A H +E K+ +VRRL + AW ++
Sbjct: 375 ATVASVFAQHDTELERIKRYSTPKVRRLLEVLAWFGEQ 412
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,665
Number of Sequences: 2352
Number of extensions: 14610
Number of successful extensions: 92
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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