Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_P10
(708 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001898-1|AAH01898.1| 247|Homo sapiens mannose-P-dolichol util... 196 6e-50
AF059752-1|AAG43121.1| 211|Homo sapiens My008 protein protein. 130 5e-30
DQ499597-1|ABF54968.1| 299|Homo sapiens HBeAg-binding protein 2... 112 1e-24
AK055923-1|BAB71046.1| 121|Homo sapiens protein ( Homo sapiens ... 87 8e-17
BC027625-1|AAH27625.1| 202|Homo sapiens PQ loop repeat containi... 51 4e-06
AK001091-1|BAE46613.1| 202|Homo sapiens protein ( Homo sapiens ... 51 4e-06
AC018463-1|AAX93048.1| 202|Homo sapiens unknown protein. 51 4e-06
AK027742-1|BAB55334.1| 126|Homo sapiens protein ( Homo sapiens ... 42 0.002
X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor rec... 30 7.1
M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor rec... 30 7.1
M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor rec... 30 7.1
M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein. 30 7.1
M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor rec... 30 7.1
M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor nec... 30 7.1
BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor r... 30 7.1
AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor r... 30 7.1
>BC001898-1|AAH01898.1| 247|Homo sapiens mannose-P-dolichol
utilization defect 1 protein.
Length = 247
Score = 196 bits (478), Expect = 6e-50
Identities = 96/211 (45%), Positives = 130/211 (61%)
Frame = +3
Query: 48 VLSQKCYNXSFLKXNFLXVPCFKSTXXXXXXXXXXXXXXXXXXPQIFKILQSKSAEGINI 227
+L +KCY+ F++ + L VPC K PQ+FKIL +KSAEG+++
Sbjct: 17 LLPEKCYDQLFVQWDLLHVPCLKILLSKGLGLGIVAGSLLVKLPQVFKILGAKSAEGLSL 76
Query: 228 YGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAALVLHYGGAPMKGGIFLSV 407
V LEL A+T YS FPFS+WGE FL +QT I LV+HY G +KG FL+
Sbjct: 77 QSVMLELVALTGTMVYSITNNFPFSSWGEALFLMLQTITICFLVMHYRGQTVKGVAFLAC 136
Query: 408 YCAIVSVLVSGYTSTDILWTMQAVTVPIILIAKSIQIGTNYKNGSTGQLSFITCFLLFGG 587
Y ++ VL+S T ++ +QA VP +++ + +Q TNY NG TGQLS IT FLLFGG
Sbjct: 137 YGLVLLVLLSPLTPLTVVTLLQASNVPAVVVGRLLQAATNYHNGHTGQLSAITVFLLFGG 196
Query: 588 SVXRIFTSIQETGDSIIILTYCVSTIANGAI 680
S+ RIFTSIQETGD ++ T+ VS++ NG I
Sbjct: 197 SLARIFTSIQETGDPLMAGTFVVSSLCNGLI 227
>AF059752-1|AAG43121.1| 211|Homo sapiens My008 protein protein.
Length = 211
Score = 130 bits (314), Expect = 5e-30
Identities = 67/178 (37%), Positives = 98/178 (55%), Gaps = 2/178 (1%)
Frame = +3
Query: 48 VLSQKCYNXSFLKXNFLXVPCFKSTXXXXXXXXXXXXXXXXXXPQIFKILQSKSAEGINI 227
+L +KCY+ F++ + L VPC K PQ+FKIL +KSAEG+++
Sbjct: 17 LLPEKCYDQLFVQWDLLHVPCLKILLSKGLGLGIVAGSLLVKLPQVFKILGAKSAEGLSL 76
Query: 228 YGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAALVLHYGGAPMKGGIFLSV 407
V LEL A+T YS FPFS+WGE FL +QT I LV+HY G +KG FL+
Sbjct: 77 QSVMLELVALTGTMVYSITNNFPFSSWGEALFLMLQTITICFLVMHYRGQTVKGVAFLAC 136
Query: 408 YCAIVSVLVSGYTSTDILWTMQAVTVPIILIAKSIQIGTNYKNG--STGQLSFITCFL 575
Y ++ VL+S T ++ +QA VP +++ + +Q TN G ++ Q S +C L
Sbjct: 137 YGLVLLVLLSPLTPLTVVTLLQASNVPAVVVGRLLQAATNTTTGTQASSQPSQSSCCL 194
>DQ499597-1|ABF54968.1| 299|Homo sapiens HBeAg-binding protein 2
binding protein A protein.
Length = 299
Score = 112 bits (269), Expect = 1e-24
Identities = 55/138 (39%), Positives = 77/138 (55%)
Frame = +3
Query: 48 VLSQKCYNXSFLKXNFLXVPCFKSTXXXXXXXXXXXXXXXXXXPQIFKILQSKSAEGINI 227
+L +KCY+ F++ + L VPC K PQ+FKIL +KSAEG+++
Sbjct: 17 LLPEKCYDQLFVQWDLLHVPCLKILLSKGLGLGIVAGSLLVKLPQVFKILGAKSAEGLSL 76
Query: 228 YGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAALVLHYGGAPMKGGIFLSV 407
V LEL A+T YS FPFS+WGE FL +QT I LV+HY G +KG FL+
Sbjct: 77 QSVMLELVALTGTMVYSITNNFPFSSWGEALFLMLQTITICFLVMHYRGQTVKGVAFLAC 136
Query: 408 YCAIVSVLVSGYTSTDIL 461
Y ++ VL+S T ++
Sbjct: 137 YGLVLLVLLSPLTPLTVV 154
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 470 AGCHCSYHSHSQVNPNRNELQKWQHWSTVVYNLLPVVWR*CXKNLHINSRNWR 628
+G C+ + +P ++L + H + ++ LP VW NLH +S N R
Sbjct: 157 SGLQCACCGGGEASPGSHQLPQRAHRPALSHHSLPAVWGLPGPNLHFHSGNRR 209
>AK055923-1|BAB71046.1| 121|Homo sapiens protein ( Homo sapiens
cDNA FLJ31361 fis, clone MESAN2008460, highly similar to
Homo sapiens SL15 protein mRNA. ).
Length = 121
Score = 86.6 bits (205), Expect = 8e-17
Identities = 41/100 (41%), Positives = 55/100 (55%)
Frame = +3
Query: 48 VLSQKCYNXSFLKXNFLXVPCFKSTXXXXXXXXXXXXXXXXXXPQIFKILQSKSAEGINI 227
+L +KCY+ F++ + L VPC K PQ+FKIL +KSAEG+++
Sbjct: 17 LLPEKCYDQLFVQWDLLHVPCLKILLSKGLGLGIVAGSLLVKLPQVFKILGAKSAEGLSL 76
Query: 228 YGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMI 347
V LEL A+T YS FPFS+WGE FL +QT I
Sbjct: 77 QSVMLELVALTGTMVYSITNNFPFSSWGEALFLMLQTITI 116
>BC027625-1|AAH27625.1| 202|Homo sapiens PQ loop repeat containing
3 protein.
Length = 202
Score = 51.2 bits (117), Expect = 4e-06
Identities = 39/165 (23%), Positives = 70/165 (42%)
Frame = +3
Query: 177 PQIFKILQSKSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAAL 356
PQI +L ++SA G+++ + LEL Y G+P + E L Q ++
Sbjct: 23 PQISAVLAARSARGLSLPSLLLELAGFLVFLRYQCYYGYPPLTYLEYPILIAQDVILLLC 82
Query: 357 VLHYGGAPMKGGIFLSVYCAIVSVLVSGYTSTDILWTMQAVTVPIILIAKSIQIGTNYKN 536
+ H+ G + +++V + +L D+ M T I +K Q+ +K
Sbjct: 83 IFHFNGNVKQATPYIAVLVSSWFILALQKWIIDL--AMNLCTF-ISAASKFAQLQCLWKT 139
Query: 537 GSTGQLSFITCFLLFGGSVXRIFTSIQETGDSIIILTYCVSTIAN 671
+G +S +T L RI T++ T D I+L + + N
Sbjct: 140 RDSGTVSALTWSLSSYTCATRIITTLMTTNDFTILLRFVIMLALN 184
>AK001091-1|BAE46613.1| 202|Homo sapiens protein ( Homo sapiens
cDNA FLJ10229 fis, clone HEMBB1000136. ).
Length = 202
Score = 51.2 bits (117), Expect = 4e-06
Identities = 39/165 (23%), Positives = 70/165 (42%)
Frame = +3
Query: 177 PQIFKILQSKSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAAL 356
PQI +L ++SA G+++ + LEL Y G+P + E L Q ++
Sbjct: 23 PQISAVLAARSARGLSLPSLLLELAGFLVFLRYQCYYGYPPLTYLEYPILIAQDVILLLC 82
Query: 357 VLHYGGAPMKGGIFLSVYCAIVSVLVSGYTSTDILWTMQAVTVPIILIAKSIQIGTNYKN 536
+ H+ G + +++V + +L D+ M T I +K Q+ +K
Sbjct: 83 IFHFNGNVKQATPYIAVLVSSWFILALQKWIIDL--AMNLCTF-ISAASKFAQLQCLWKT 139
Query: 537 GSTGQLSFITCFLLFGGSVXRIFTSIQETGDSIIILTYCVSTIAN 671
+G +S +T L RI T++ T D I+L + + N
Sbjct: 140 RDSGTVSALTWSLSSYTCATRIITTLMTTNDFTILLRFVIMLALN 184
>AC018463-1|AAX93048.1| 202|Homo sapiens unknown protein.
Length = 202
Score = 51.2 bits (117), Expect = 4e-06
Identities = 39/165 (23%), Positives = 70/165 (42%)
Frame = +3
Query: 177 PQIFKILQSKSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAAL 356
PQI +L ++SA G+++ + LEL Y G+P + E L Q ++
Sbjct: 23 PQISAVLAARSARGLSLPSLLLELAGFLVFLRYQCYYGYPPLTYLEYPILIAQDVILLLC 82
Query: 357 VLHYGGAPMKGGIFLSVYCAIVSVLVSGYTSTDILWTMQAVTVPIILIAKSIQIGTNYKN 536
+ H+ G + +++V + +L D+ M T I +K Q+ +K
Sbjct: 83 IFHFNGNVKQATPYIAVLVSSWFILALQKWIIDL--AMNLCTF-ISAASKFAQLQCLWKT 139
Query: 537 GSTGQLSFITCFLLFGGSVXRIFTSIQETGDSIIILTYCVSTIAN 671
+G +S +T L RI T++ T D I+L + + N
Sbjct: 140 RDSGTVSALTWSLSSYTCATRIITTLMTTNDFTILLRFVIMLALN 184
>AK027742-1|BAB55334.1| 126|Homo sapiens protein ( Homo sapiens
cDNA FLJ14836 fis, clone OVARC1001702. ).
Length = 126
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +3
Query: 48 VLSQKCYNXSFLKXNFLXVPCFKSTXXXXXXXXXXXXXXXXXXPQIFKILQSKSAEGI 221
+L +KCY+ F++ + L VPC K PQ+FKIL +KSA G+
Sbjct: 17 LLPEKCYDQLFVQWDLLHVPCLKILLSKGLGLGIVAGSLLVKLPQVFKILGAKSAAGL 74
>X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor
receptor type 1 protein.
Length = 455
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +2
Query: 209 CRRNQY--LWSLSGVVCYHCELCL 274
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor
receptor 1 protein.
Length = 455
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +2
Query: 209 CRRNQY--LWSLSGVVCYHCELCL 274
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +2
Query: 209 CRRNQY--LWSLSGVVCYHCELCL 274
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein.
Length = 453
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +2
Query: 209 CRRNQY--LWSLSGVVCYHCELCL 274
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +2
Query: 209 CRRNQY--LWSLSGVVCYHCELCL 274
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor
necrosis factor receptor mRNA, complete cds. ).
Length = 455
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +2
Query: 209 CRRNQY--LWSLSGVVCYHCELCL 274
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +2
Query: 209 CRRNQY--LWSLSGVVCYHCELCL 274
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
>AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 30.3 bits (65), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +2
Query: 209 CRRNQY--LWSLSGVVCYHCELCL 274
CR+NQY WS + C++C LCL
Sbjct: 127 CRKNQYRHYWSENLFQCFNCSLCL 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,943,016
Number of Sequences: 237096
Number of extensions: 2439118
Number of successful extensions: 11820
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11815
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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