Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_P06
         (767 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0317 - 16328558-16328612,16328698-16328901,16329794-163300...   322   3e-88
01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419          316   1e-86
07_03_0100 + 13389899-13390219,13390723-13390841,13391220-133913...    32   0.44 
01_07_0219 + 42079095-42079399,42079584-42079728,42081695-420817...    31   0.77 
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57...    28   7.1  

>11_04_0317 -
           16328558-16328612,16328698-16328901,16329794-16330065,
           16330152-16330220
          Length = 199

 Score =  322 bits (790), Expect = 3e-88
 Identities = 155/190 (81%), Positives = 173/190 (91%), Gaps = 1/190 (0%)
 Frame = +3

Query: 159 EIKLFGRWSCYDVQVSDMSLQDYISVKE-KYAKYLPHSAGRYAHKRFRKAQCPIVERLTN 335
           E+KLF RWS  DVQV+D+SL DY++V   K+A YLPH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 10  EVKLFSRWSFEDVQVNDISLADYLAVNPTKHATYLPHTAGRYSAKRFRKAQCPIVERLTN 69

Query: 336 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTV 515
           SLMMHGRNNGKK+MAVRIVKHA EIIHLLT  NP+QV+V AIINSGPRED+TRIG AG V
Sbjct: 70  SLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAGAV 129

Query: 516 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKD 695
           RRQAVD+SPLRRVNQAI+LL TGARE+AFRNIKTIAEC+ADELINAAKGSSNSYAIKKKD
Sbjct: 130 RRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 189

Query: 696 XLERVAKSNR 725
            +ERVAK+NR
Sbjct: 190 EIERVAKANR 199


>01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419
          Length = 200

 Score =  316 bits (776), Expect = 1e-86
 Identities = 152/189 (80%), Positives = 171/189 (90%), Gaps = 1/189 (0%)
 Frame = +3

Query: 162 IKLFGRWSCYDVQVSDMSLQDYISVKE-KYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 338
           +KLF  WS  DVQV+D+SL DY++V   K+A YLPH+AGRY+ KRFRKAQCP+VERLTNS
Sbjct: 12  VKLFNCWSFEDVQVNDISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERLTNS 71

Query: 339 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVR 518
           LMMHGRNNGKK+MAVRIVKHA EIIHLLT  NP+QV+V AIINSGPRED+TRIG AG VR
Sbjct: 72  LMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAGAVR 131

Query: 519 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDX 698
           RQAVD+SPLRRVNQAI+LL TGARE+AFRNIKTIAEC+ADELINAAKGSSNSYAIKKKD 
Sbjct: 132 RQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 191

Query: 699 LERVAKSNR 725
           +ERVAK+NR
Sbjct: 192 IERVAKANR 200


>07_03_0100 +
           13389899-13390219,13390723-13390841,13391220-13391315,
           13391481-13391553,13392055-13392123
          Length = 225

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -2

Query: 604 LNAASRAPVHKSQIAWLTRRKGETSTA*RRTVPARPILVESSRGPE 467
           L+A+SR P  + +I    RR+G + +  RR+ P +P     +R PE
Sbjct: 49  LHASSRVPAARHRIVCPCRRRGGSPSLTRRSSPEKPGPFSQTRSPE 94


>01_07_0219 +
           42079095-42079399,42079584-42079728,42081695-42081739,
           42082150-42082265,42082913-42083012,42083103-42083138,
           42083301-42083351,42083431-42083565
          Length = 310

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +3

Query: 516 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNS 674
           RR+AV  + +RR+  A WL   GAR A  R         A E++ +A G   S
Sbjct: 9   RREAVRAAHVRRIEAAAWL---GARRATRREDAAARCAAAGEVVGSAAGVGRS 58


>07_01_0077 +
           566895-567127,567207-567331,571204-571340,571437-571542,
           571635-571885,572018-572128,572209-572320,572626-572716,
           573168-573507,573678-573900,573946-574204,574274-574481,
           574572-574622,574712-574870,574956-575120,575322-575399,
           575732-576031,576107-576259,576871-576918,577019-577188,
           577738-577852,578462-578623,578789-578893,578969-579199,
           579277-579410,579484-579738,579822-580110,580214-580306,
           580395-580520,580646-580897
          Length = 1693

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 100 PRQAAWLWKPCLYHKPPTF 156
           P Q +WLW+  L H P  F
Sbjct: 90  PSQCSWLWREVLKHNPDAF 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,550,240
Number of Sequences: 37544
Number of extensions: 429857
Number of successful extensions: 985
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)