Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_P05
(504 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 2.7
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 22 3.6
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 22 3.6
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 22 3.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 6.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 6.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 6.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 6.3
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 21 6.3
AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein. 21 8.3
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 8.3
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 22.2 bits (45), Expect = 2.7
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 131 QQNSLPAEKLVGIQSPPQFFTNKKAFSLLTSRSTAPQDNSSAG 3
++ SLP KL+ ++ F N + SLL +D+S AG
Sbjct: 595 RKKSLPVRKLLELERAQHEFKNGDSSSLLDKM----RDSSGAG 633
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 21.8 bits (44), Expect = 3.6
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -3
Query: 148 DVLR*CSRILCRQKS*WESSRRHSFSQTRRPFP 50
DV+ R++ + W S R H++ T +P
Sbjct: 55 DVMADIERVIMPGVTHWHSPRFHAYFPTANSYP 87
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 21.8 bits (44), Expect = 3.6
Identities = 16/67 (23%), Positives = 25/67 (37%)
Frame = -3
Query: 259 PLPSNNCYKLKTTYTKMXXXXXXXXNHRSFYDCISICDVLR*CSRILCRQKS*WESSRRH 80
P ++N + +T YT HRS Y C + + RQ W +RR
Sbjct: 79 PKGASNGKRARTAYTSSQLVELEREFHRSKYLCRPRRIQMAQNLNLTERQIKIWFQNRRM 138
Query: 79 SFSQTRR 59
F + +
Sbjct: 139 KFKKEEK 145
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 21.8 bits (44), Expect = 3.6
Identities = 16/67 (23%), Positives = 25/67 (37%)
Frame = -3
Query: 259 PLPSNNCYKLKTTYTKMXXXXXXXXNHRSFYDCISICDVLR*CSRILCRQKS*WESSRRH 80
P ++N + +T YT HRS Y C + + RQ W +RR
Sbjct: 99 PKGASNGKRARTAYTSSQLVELEREFHRSKYLCRPRRIQMAQNLNLTERQIKIWFQNRRM 158
Query: 79 SFSQTRR 59
F + +
Sbjct: 159 KFKKEEK 165
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 295 RPPTSHYLIVVYFIVLH 345
+P SH+LIV + LH
Sbjct: 161 KPAFSHFLIVFFTETLH 177
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 295 RPPTSHYLIVVYFIVLH 345
+P SH+LIV + LH
Sbjct: 161 KPAFSHFLIVFFTETLH 177
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 295 RPPTSHYLIVVYFIVLH 345
+P SH+LIV + LH
Sbjct: 161 KPAFSHFLIVFFTETLH 177
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 295 RPPTSHYLIVVYFIVLH 345
+P SH+LIV + LH
Sbjct: 161 KPAFSHFLIVFFTETLH 177
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 21.0 bits (42), Expect = 6.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 350 YVSYNLMCISLFP*CFLL 403
YVSY L+ + P CF +
Sbjct: 177 YVSYLLIFVQQIPFCFFV 194
>AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein.
Length = 253
Score = 20.6 bits (41), Expect = 8.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 74 KTVAATGFPLAFLPAKNSAALTEN 145
KTV + PLA P + S +T N
Sbjct: 41 KTVIQSKRPLAPAPERTSVLVTNN 64
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 20.6 bits (41), Expect = 8.3
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 327 IFYCFALIMSVII*CAYHYFLNVFF*LKPSNYF 425
+FYC +I +V +YF F L YF
Sbjct: 84 LFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYF 116
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,976
Number of Sequences: 336
Number of extensions: 1872
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -