Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_P05
         (504 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    24   2.5  
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    24   3.4  

>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 302 GGRNY*CLSYFTTYSVAIEQLLQIKNN 222
           GG +Y CL   T+YS A    +Q+K+N
Sbjct: 9   GGCSYICLLNPTSYSCACPIGIQLKDN 35


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 128 AALTENITNANTIIKRSVIKKKKLFILHFCISCF*FVAVVR 250
           AA   +I++A+  +  S +  K    LH+C+SC     VVR
Sbjct: 46  AAAVRDISDAS--VYSSYVLPKLYAKLHYCVSCAIHSKVVR 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,908
Number of Sequences: 2352
Number of extensions: 6734
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)