Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_P04
         (624 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29535-16|AAN63448.1|  143|Caenorhabditis elegans Hypothetical p...    76   2e-14
U29535-15|AAN63449.1|  148|Caenorhabditis elegans Hypothetical p...    73   2e-13
L08403-2|AAA28024.2|  169|Caenorhabditis elegans Hypothetical pr...    71   5e-13
Z93375-3|CAB07565.3|  443|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AF125960-3|AAD14737.1|  446|Caenorhabditis elegans Hypothetical ...    28   6.2  
U80024-9|AAK18886.1|  300|Caenorhabditis elegans Serpentine rece...    27   8.2  

>U29535-16|AAN63448.1|  143|Caenorhabditis elegans Hypothetical
           protein C25H3.14 protein.
          Length = 143

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
 Frame = +1

Query: 115 MGTKGIKIAELFTKTIAATK--GFDQNLRKLKVTSCGNGSMVTEFQVGPEHLNQRGTLHG 288
           M +K ++IA+   K        G+    R ++      G++  EF+V  +  NQ  TLHG
Sbjct: 1   MASKYMQIAKEVIKMFGTKGQFGYAAGARNVRAVHAEEGNLRVEFEVEKDQTNQFETLHG 60

Query: 289 GFIAHLVDAISTYALTTNENVDTRGVSIDLSLSFYSAAKEGDNIEVEAKTRKTGKKIAFL 468
           G  A L+D  +T AL   +     GVS+DL +++ +AA  G+ + + +   K G+ + F 
Sbjct: 61  GCTAALIDCFTTGALLLTKEARP-GVSVDLHITYLTAANIGETLVLNSTVIKQGRSLGFT 119

Query: 469 EVEVRNKDKNQVLASGRHTK 528
           + E+  K  N ++A+G HTK
Sbjct: 120 KAELYRKRDNAMIATGVHTK 139


>U29535-15|AAN63449.1|  148|Caenorhabditis elegans Hypothetical
           protein C25H3.3 protein.
          Length = 148

 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 37/102 (36%), Positives = 61/102 (59%)
 Frame = +1

Query: 223 GSMVTEFQVGPEHLNQRGTLHGGFIAHLVDAISTYALTTNENVDTRGVSIDLSLSFYSAA 402
           G++  EF+V  +  N   TLHGG  + L+D  +T AL   +     GVS+DL +++ +AA
Sbjct: 39  GNLRVEFEVEKDQSNHFNTLHGGCTSTLIDIFTTGALLLTKPARP-GVSVDLHVTYLTAA 97

Query: 403 KEGDNIEVEAKTRKTGKKIAFLEVEVRNKDKNQVLASGRHTK 528
           K G+ + +++   K GK +AF + E+  K  N ++A+G HTK
Sbjct: 98  KIGETLVLDSTVIKQGKTLAFTKAELYRKSDNVMIATGVHTK 139


>L08403-2|AAA28024.2|  169|Caenorhabditis elegans Hypothetical
           protein F42H10.6 protein.
          Length = 169

 Score = 71.3 bits (167), Expect = 5e-13
 Identities = 37/99 (37%), Positives = 55/99 (55%)
 Frame = +1

Query: 229 MVTEFQVGPEHLNQRGTLHGGFIAHLVDAISTYALTTNENVDTRGVSIDLSLSFYSAAKE 408
           +V E  V  +HLN +GTLHGG  A L D I+  A+      D    S++L++S+    K 
Sbjct: 54  LVCEMVVQHQHLNSKGTLHGGQTATLTDVITARAVGVTVK-DKGMASVELAVSYLLPVKV 112

Query: 409 GDNIEVEAKTRKTGKKIAFLEVEVRNKDKNQVLASGRHT 525
           GD +E+ A   K G+ +AF + E R K   ++ A G+HT
Sbjct: 113 GDVLEITAHVLKVGRTMAFTDCEFRRKSDGKMSAKGKHT 151


>Z93375-3|CAB07565.3|  443|Caenorhabditis elegans Hypothetical
           protein C38C6.5 protein.
          Length = 443

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 148 FTKTIAATKGFDQNLRKLKVTSCGNGSMVT 237
           F  ++     F +NL  LK  SC NGSMV+
Sbjct: 372 FFSSVDFLNRFTKNLNNLKTESCLNGSMVS 401


>AF125960-3|AAD14737.1|  446|Caenorhabditis elegans Hypothetical
           protein T12B3.1 protein.
          Length = 446

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 214 CGNGSMVTEFQVGPEHLNQRGTLHGGF 294
           CG+G++ + F   PE+L + G  H  F
Sbjct: 118 CGSGNLTSGFSYDPENLMRNGIYHYNF 144


>U80024-9|AAK18886.1|  300|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 10 protein.
          Length = 300

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -1

Query: 489 FVPNF--NFEECNFFSGFTSFGLYFNIVSFFGCTVET 385
           F+PN   N+     FS F + G Y  I+  FG  +ET
Sbjct: 240 FLPNSISNYAAQFEFSSFQNIGPYIYIIKLFGIAIET 276


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,830,142
Number of Sequences: 27780
Number of extensions: 249886
Number of successful extensions: 702
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)