Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_P03
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.36 
AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    24   1.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   3.3  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   5.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   5.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   5.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   7.7  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 489 FKEQSL*CFNNYLII 533
           FKE SL CFN Y+I+
Sbjct: 70  FKEASLYCFNYYVIV 84


>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 107 EEQKAEITKSSLPLIAECSKEFSVNQGDID 196
           EE  +E+T SS  +++  +   S + GD+D
Sbjct: 12  EESSSEVTSSSALVMSPANSLASTDIGDVD 41


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 436 TSPRLFRCKQRKFLGLLTLKNKACDVSII 522
           T+ RLF    +   G+L   +  CD++ I
Sbjct: 294 TALRLFTIDNKLLFGVLAYYSTTCDIATI 322


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 140 MMISLSRPFVLLLVHLHQQPMH 75
           M +SL+R  +  + H H  PMH
Sbjct: 347 MDMSLTRHQISSMGHSHAHPMH 368


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = -1

Query: 174 LNSLEHSAIRGNDDFVISAFCSSVSAFTP 88
           + + EH ++RG    +++A C+ +S  +P
Sbjct: 24  VKAAEHPSLRGTPLAMLAAQCNKLSNKSP 52


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 226  TARITKFLSRVNVALIHAELFGAFRY 149
            T   +KF S + + LI  ++FG   +
Sbjct: 1084 TLVFSKFTSSIRMLLIQGQIFGLITF 1109



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 217 ITKFLSRVNVALIHAELFG 161
           + KFL+ + + L H ++FG
Sbjct: 7   VEKFLNSLQIYLQHNQIFG 25


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 140 MMISLSRPFVLLLVHLHQQPMH 75
           M +SL+R  +  + H H  PMH
Sbjct: 347 MDMSLTRHQISSMGHSHAHPMH 368


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 217 ITKFLSRVNVALIHAELFG 161
           + KFL+ + + L H ++FG
Sbjct: 25  VEKFLNSLQIYLQHNQIFG 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,046
Number of Sequences: 336
Number of extensions: 2262
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)