Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_P03
         (588 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              48   7e-08
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               32   0.005
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   3.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   3.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.8  

>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 48.0 bits (109), Expect = 7e-08
 Identities = 37/136 (27%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
 Frame = +2

Query: 62  VLAFCALAVGVNALTEEQKAEITKSSLPLIAECSKEFSVNQGDIDAAKK-LGDPSGLN-S 235
           + AFC   VG+ A++EE   ++ K    + + C++E  ++    D  KK + D +    +
Sbjct: 7   IFAFCL--VGILAVSEESINKLRK----IESVCAEENGIDLKKADDVKKGIFDKNDEKLA 60

Query: 236 CFVGCFMKKAGIINASGLFDVAATIEKSKKYLTSEEDLKAFEKLTEMCAPENDKPVSDSD 415
           C+V C +KK G +NA   F+     E+  +  T++ D +   +L   C     K +++S+
Sbjct: 61  CYVDCMLKKVGFVNADTTFN-----EEKFRERTTKLDSEQVNRLVNNC-----KDITESN 110

Query: 416 KGCERAKLLLDCFVAN 463
             C+++  LL CF+ N
Sbjct: 111 -SCKKSSKLLQCFIDN 125


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 31.9 bits (69), Expect = 0.005
 Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
 Frame = +2

Query: 155 ECSKEFSVNQGDIDAAKKLGDPSGLNS---CFVGCFMKKAGIINASGLFDVAATIEKSKK 325
           +C KE  V+   +   K  GD    +    C++ CFM K GI++ +   DV    +K+ +
Sbjct: 28  DCRKESKVSWAALKKMKA-GDMEQDDQNLKCYLKCFMTKHGILDKNAEVDV----QKALR 82

Query: 326 YL-TSEEDLKAFEKLTEMCAPENDKPVSDSDKGCERAKLLLDCFV 457
           +L  S +D  + +KL   C     K + + D  CE+A  L+ C+V
Sbjct: 83  HLPRSMQD--STKKLFNKC-----KSIQNEDP-CEKAYQLVKCYV 119


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 264 LESSTQVVFSM*PLLLRRARNILP 335
           L+S+ +VV  +  + L  A+NILP
Sbjct: 32  LDSNVEVVVGVPSIYLTYAKNILP 55


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 481 DRETSFVCNETVEEKFCSFAAL 416
           D+ T F     VEE  C F+A+
Sbjct: 452 DKSTEFFLATVVEEAACRFSAV 473


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -3

Query: 400 WFVVFWSAHLR 368
           WFV FW  H +
Sbjct: 425 WFVEFWEHHFQ 435


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,772
Number of Sequences: 438
Number of extensions: 2966
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)