Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_O22
         (515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    57   8e-11
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.40 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   1.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   1.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   1.6  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.6  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   8.6  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   8.6  

>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 57.2 bits (132), Expect = 8e-11
 Identities = 31/77 (40%), Positives = 43/77 (55%)
 Frame = +1

Query: 220 GKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 399
           G+ +  +R + +P V   +  H+ P       S      K  K P KRK++RF TRV+ +
Sbjct: 19  GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78

Query: 400 ERYKSGKNKWFFQKLRF 450
           E  KSG+NKWFFQK RF
Sbjct: 79  EGSKSGRNKWFFQKGRF 95


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 109  DPRTGHLGPALLYPASLFCPYLEGYSL 29
            D +TGH+ P   YP  ++  +   +SL
Sbjct: 2520 DKQTGHVAPLYYYPGDVYDYFNANFSL 2546


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 143 VPPTSHTGMPSSLVSTGTPGKCTRGWERIKST 238
           +P T H GM  SL    +PG C  G   ++ T
Sbjct: 372 LPETMHMGMGPSLTPLASPG-CGPGQGGLQPT 402


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 253 KPFVKVVNYNHLMPTRY 303
           K F  +VN  HL+ T+Y
Sbjct: 83  KNFTNIVNLTHLLETQY 99


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 143 VPPTSHTGMPSSLVSTGTPGKCTRGWERIKST 238
           +P T H GM  SL    +PG C  G   ++ T
Sbjct: 372 LPETMHMGMGPSLTPLASPG-CGPGQGGLQPT 402


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = -3

Query: 366 LTLRGVFQVFCAKFFKAEVNCITCWHQVIVVYNLDERLYLGPLVD-FILSHPLVHFPGVP 190
           + L+G+  +       A  N + C+H +   Y L+   +    +D  + +H +  F G+ 
Sbjct: 1   MMLKGLALLSILGIVSAATNKVVCYHGIWSTYRLNNGKFTVEDIDPTLCTHLIYSFVGLG 60

Query: 189 VDT 181
            D+
Sbjct: 61  DDS 63


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 1   RPADAMSTSKGNIPPSMGKIMKPGKVVLVLSGRYA 105
           R  D +S+  GN+PP       P     V+S  Y+
Sbjct: 102 RTDDWLSSPSGNVPPLTPSPGPPSHPYTVISNGYS 136


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 103 AGRKAIVVKNYDEGTSDKP 159
           AG+K   VK  DE   +KP
Sbjct: 73  AGKKPENVKKEDESDEEKP 91


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 161 YGLSEVPSS*FL 126
           +GL EVPSS FL
Sbjct: 55  HGLPEVPSSRFL 66


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 161 YGLSEVPSS*FL 126
           +GL EVPSS FL
Sbjct: 55  HGLPEVPSSRFL 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,574
Number of Sequences: 336
Number of extensions: 2416
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)