Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_O20
         (779 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92803-9|CAC35822.1|  248|Caenorhabditis elegans Hypothetical pr...   105   5e-23
U97001-1|AAB52259.1|  257|Caenorhabditis elegans Hypothetical pr...    35   0.057
U97012-2|AAK39140.1|  241|Caenorhabditis elegans Hypothetical pr...    32   0.40 
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p...    30   2.1  
Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z83112-2|CAB05539.1|  391|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AF125964-4|ABA03109.1|  414|Caenorhabditis elegans Hypothetical ...    28   6.5  
AF047655-3|ABD63244.1|  414|Caenorhabditis elegans Hypothetical ...    28   6.5  
AF025465-11|AAB71024.1|  411|Caenorhabditis elegans Hypothetical...    28   6.5  
AF016683-3|AAB66193.1|  497|Caenorhabditis elegans Hypothetical ...    28   6.5  
AF016422-3|AAG24173.1|  411|Caenorhabditis elegans Hypothetical ...    28   6.5  
AC024831-4|ABD63212.1|  355|Caenorhabditis elegans Hypothetical ...    28   6.5  
Z98866-24|CAB11568.2|  366|Caenorhabditis elegans Hypothetical p...    28   8.6  
AL033514-39|CAA22095.2|  401|Caenorhabditis elegans Hypothetical...    28   8.6  
AF016657-2|AAB93652.1|  366|Caenorhabditis elegans Hypothetical ...    28   8.6  

>Z92803-9|CAC35822.1|  248|Caenorhabditis elegans Hypothetical
           protein K01G5.10 protein.
          Length = 248

 Score =  105 bits (251), Expect = 5e-23
 Identities = 67/208 (32%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
 Frame = +1

Query: 163 IRLVTFDATNTLLKFKMVPSQYYTKIARTYGYRGSESDAQNKMRENFKMMWEQHPNFGRN 342
           +++++ DA +TL+  K  P   Y++ AR Y              +N+K M    P FG N
Sbjct: 19  VKVLSLDARDTLITMKESPPIVYSRFARQYDLEVDSDQIMGSFLKNYKRMSIASPCFGFN 78

Query: 343 SILWEEWWRQVVKLTLQDHLPEGADTR--SLGNTLINDFKTSKCWDVAAGSDT--LLQXX 510
            I  + WW +VV  TL D  P+    R   +   L N + T + W +   SDT   LQ  
Sbjct: 79  GIGNKSWWIEVVSSTLLDCAPDSEKGRVEVIAGALYNHYATPEPWKLVE-SDTRQTLQKL 137

Query: 511 XXXXXXXXXXSNSDPRLYDILQNLGLSKYFDFILTSYDCGFSKPDSRIFQEALLRCKEIT 690
                     SN D RL  +L    L   F   + S + G+ KPD +IFQ  ++   ++ 
Sbjct: 138 RLKGIILVVISNFDSRLKSLLSQFNLLDLFSMTVLSGEIGYEKPDEKIFQ-LVVNHFDLI 196

Query: 691 KASESLHIGDDLXKDYIGARESGWHALL 774
             SE LHIGD+L  D+ GA+  G  ALL
Sbjct: 197 SPSEILHIGDNLKNDFHGAKNFGCRALL 224


>U97001-1|AAB52259.1|  257|Caenorhabditis elegans Hypothetical
           protein K08B12.3 protein.
          Length = 257

 Score = 35.1 bits (77), Expect = 0.057
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 637 KPDSRIFQEALLRCKEITKASESLHIGDDLXKDYIGARESGWHALLI 777
           KP+   F+ AL    E    S ++ IGDD+  D +GA + G  A+L+
Sbjct: 176 KPNKLFFESALQSLNENVDFSSAVMIGDDVNDDALGAIKIGMRAILV 222


>U97012-2|AAK39140.1|  241|Caenorhabditis elegans Hypothetical
           protein C04E6.7 protein.
          Length = 241

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +1

Query: 586 LSKYFDFILTSYDCGFSKPDSRIFQEALLRCKEITKASESLHIGD 720
           + KYFD ++ S   G  KPD R +Q A L C ++ +  E ++I D
Sbjct: 162 MEKYFDHVIESCKEGVKKPDPRFYQIA-LDCVDV-QPEEVIYIDD 204


>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical
           protein C26C6.1a protein.
          Length = 1883

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 601 DFILT-SYDCGFSKPDSRIFQEALLRCKEITKASESLHIGDDLXKDYIGAR 750
           DF+L  S  C F++ DS I++EA+   K + +    L  GDD  +  +  R
Sbjct: 780 DFMLMLSNACKFNETDSDIYKEAVSLQKALLEMKRELDTGDDAPRVQVELR 830


>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
           protein C26C6.1a protein.
          Length = 1883

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 601 DFILT-SYDCGFSKPDSRIFQEALLRCKEITKASESLHIGDDLXKDYIGAR 750
           DF+L  S  C F++ DS I++EA+   K + +    L  GDD  +  +  R
Sbjct: 780 DFMLMLSNACKFNETDSDIYKEAVSLQKALLEMKRELDTGDDAPRVQVELR 830


>Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical
           protein F55H12.1 protein.
          Length = 768

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +1

Query: 307 MMWEQHPNFGRNSILWEEWWRQVVKLTLQDHLPEGADTRSLGNTLINDFKTSKCW 471
           M+ +QHP++ R S  W EW     K  + D LPE  +       +I+  +T + W
Sbjct: 694 MLQKQHPSYDRISEQWPEW-----KKAIGDKLPE-QEPGDDDLNMIDGLETKETW 742


>Z83112-2|CAB05539.1|  391|Caenorhabditis elegans Hypothetical
           protein K02B7.2 protein.
          Length = 391

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -3

Query: 345 RIPSKIRMLFPHHFKV-FPH 289
           R+PS + MLF HH KV F H
Sbjct: 302 RLPSVVNMLFKHHIKVRFDH 321


>AF125964-4|ABA03109.1|  414|Caenorhabditis elegans Hypothetical
           protein W03G1.3 protein.
          Length = 414

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -3

Query: 345 RIPSKIRMLFPHHFKV-FPH 289
           R+PS + MLF HH KV F H
Sbjct: 325 RLPSVVNMLFKHHIKVRFDH 344


>AF047655-3|ABD63244.1|  414|Caenorhabditis elegans Hypothetical
           protein C17B7.13 protein.
          Length = 414

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -3

Query: 345 RIPSKIRMLFPHHFKV-FPH 289
           R+PS + MLF HH KV F H
Sbjct: 325 RLPSVVNMLFKHHIKVRFDH 344


>AF025465-11|AAB71024.1|  411|Caenorhabditis elegans Hypothetical
           protein K02E7.2 protein.
          Length = 411

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -3

Query: 345 RIPSKIRMLFPHHFKV-FPH 289
           R+PS + MLF HH KV F H
Sbjct: 322 RLPSVVNMLFKHHIKVRFDH 341


>AF016683-3|AAB66193.1|  497|Caenorhabditis elegans Hypothetical
           protein K09F6.2 protein.
          Length = 497

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -3

Query: 345 RIPSKIRMLFPHHFKV-FPH 289
           R+PS + MLF HH KV F H
Sbjct: 396 RLPSVVNMLFKHHIKVRFDH 415


>AF016422-3|AAG24173.1|  411|Caenorhabditis elegans Hypothetical
           protein R09E12.5 protein.
          Length = 411

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -3

Query: 345 RIPSKIRMLFPHHFKV-FPH 289
           R+PS + MLF HH KV F H
Sbjct: 322 RLPSVVNMLFKHHIKVRFDH 341


>AC024831-4|ABD63212.1|  355|Caenorhabditis elegans Hypothetical
           protein Y55F3C.11 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -3

Query: 345 RIPSKIRMLFPHHFKV-FPH 289
           R+PS + MLF HH KV F H
Sbjct: 266 RLPSVVNMLFKHHIKVRFDH 285


>Z98866-24|CAB11568.2|  366|Caenorhabditis elegans Hypothetical
           protein Y49E10.25 protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 309 HFKVFPHLILSITFASPVTICTCNLCV 229
           H  +FP LIL I+   P T   C+ C+
Sbjct: 6   HLSIFPLLILCISHVIPTTPGLCSRCI 32


>AL033514-39|CAA22095.2|  401|Caenorhabditis elegans Hypothetical
           protein Y75B8A.5 protein.
          Length = 401

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/62 (24%), Positives = 29/62 (46%)
 Frame = +1

Query: 151 CLQGIRLVTFDATNTLLKFKMVPSQYYTKIARTYGYRGSESDAQNKMRENFKMMWEQHPN 330
           C +  + VT +    +     +PS Y + + R    R  E ++  KM +  ++ +E +PN
Sbjct: 43  CDEDKQQVTCEGQQVVTLPDRLPSGYESLVIRNSSVRTIEKNSFRKMEKLMQIEFENNPN 102

Query: 331 FG 336
            G
Sbjct: 103 LG 104


>AF016657-2|AAB93652.1|  366|Caenorhabditis elegans Hypothetical
           protein C16C4.6 protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -3

Query: 372 LSPPFFPEDRIPSKIRMLFPHHFKVFPHLILSITFASPVTICTCNL 235
           +S P FP  R+PSK       HF +    +LS +  SP ++ + N+
Sbjct: 57  MSSPSFPVLRLPSKALRATLQHFAIID--LLSFSLISPNSVRSLNI 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,112,942
Number of Sequences: 27780
Number of extensions: 343589
Number of successful extensions: 814
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)