Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_O19
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein pro...    26   1.2  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   3.8  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   5.0  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    23   6.6  

>AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein
           protein.
          Length = 182

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = -2

Query: 356 GAGSDDLRSVEGDTVNSIQDDSRR--MRGLREGGD 258
           GAGSDD  S   D     +DD+      G  EGGD
Sbjct: 114 GAGSDDAVSGADDETEESKDDAEEDSEEGGEEGGD 148


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 183 HWCCTGTTN*LQARQRCR 130
           HW C G TN L+   RCR
Sbjct: 61  HWSCIGCTNMLK-NPRCR 77


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +3

Query: 69  VVLFSIFAVAVAKPSLVAPLAYSAVVPGVSSLSQYSTSVVHGSPLVAPALYN 224
           V L SI  VA A PS+  P  +       +S  +Y    V G+P     L N
Sbjct: 179 VALPSIVDVAFASPSIARPDTWVVSTSYTASDHRYVLYTVGGTPPSPEQLQN 230


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
 Frame = +3

Query: 72  VLFSIFAVAVAKPSLVAPLAYSAVVPGVSSLS------QYSTSVVHGSPLVAPALY 221
           V+++I  +++  P  + P+A       V+         QY   +V G P+V P LY
Sbjct: 145 VIYNIIFMSIMVPHFLLPVASWRNGSEVAKFKNMWTDFQYKYLIVTGKPIVFPKLY 200


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,247
Number of Sequences: 2352
Number of extensions: 9781
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)