Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_O15
(826 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320... 42 6e-04
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 35 0.090
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 33 0.36
11_04_0401 - 17251759-17252208,17252545-17253022,17254235-172542... 32 0.64
02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659... 31 0.84
02_03_0080 + 14935664-14935796,14943858-14944175,14944352-149451... 31 1.1
10_03_0002 - 6858257-6861205 31 1.5
06_03_0742 + 24027506-24027721,24028835-24029004,24029893-240300... 30 2.6
08_02_0132 + 12908995-12909437,12909727-12910211,12910417-129109... 29 3.4
11_08_0032 - 27807489-27807497,27807641-27807684,27808046-278081... 29 4.5
11_08_0026 + 27752519-27755441,27755538-27755923 29 4.5
12_01_0991 - 10057736-10058249,10058412-10059241,10059266-100606... 29 5.9
11_06_0075 - 19829016-19829399 29 5.9
07_03_1436 - 26543846-26546806 29 5.9
05_01_0397 - 3129679-3130144,3130655-3131104,3132215-3132273,313... 28 7.8
>04_03_0582 + 17528335-17529790,17529913-17531651,17531814-17532035,
17532062-17533525
Length = 1626
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/88 (27%), Positives = 42/88 (47%)
Frame = -1
Query: 313 SPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVAS 134
SPG DG F + + + + +G +PE ++ I K ++P D+
Sbjct: 908 SPGPDGFPARFYQRNWGTLKSDIILAVRNFFQSGLMPEGVNDTAIVLIPKKDQPI-DLKD 966
Query: 133 YRPIALSSVLTKVAEHLVKNRLEWFIEN 50
YRPI+L +V+ KV + NRL +++
Sbjct: 967 YRPISLCNVVYKVVSKCLVNRLRPILDD 994
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 34.7 bits (76), Expect = 0.090
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = -1
Query: 358 SLHELKGVLSHVK-DSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQE 182
++ E+ ++S + D +PG DG F+ + + L+ + GN+ +
Sbjct: 313 TVKEIDSLMSIIPADKAPGPDGFNGFFMKKCWHIIAQDYYRLV-AHFHAGNVDLEILNSS 371
Query: 181 VIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGF 17
I + V +RPI+L + K+ L+ RL+ I ++++ YGF
Sbjct: 372 FITLVPKKTSLETVNDFRPISLMGISLKIVTKLLAGRLQGVI--LKLVSDNHYGF 424
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 32.7 bits (71), Expect = 0.36
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = -1
Query: 295 IMYSFLSHLGNSALMYFLNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVASYRPIAL 116
+ S + H G F +L +G E ++ I+KP K N V YRPI+L
Sbjct: 936 VQASTVQH-GTQLKRRFFSLATGFTTSGADIERINRAYIVLIQKPGKE-NTVDGYRPISL 993
Query: 115 SSVLTKVAEHLVKNRLE 65
+ K+ ++ RL+
Sbjct: 994 QNCSVKILSKVLATRLQ 1010
>11_04_0401 -
17251759-17252208,17252545-17253022,17254235-17254290,
17254489-17255019
Length = 504
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = -1
Query: 244 LNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRLE 65
+N + + TG P ++ I ++P D+ +RPI+L +V+ KV + NRL
Sbjct: 428 VNPVTKIFQTGLTPMGVNDTAIVLILMSDQPV-DLKDFRPISLCNVVYKVVFKCLVNRLR 486
Query: 64 WFIEN 50
+++
Sbjct: 487 TVLDD 491
>02_02_0078 +
6587491-6588021,6588160-6589151,6592430-6592607,
6592635-6592794,6592992-6593158,6593246-6593869
Length = 883
Score = 31.5 bits (68), Expect = 0.84
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = -1
Query: 169 KKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRLEWFI 56
+K + P + ++ +RPI+L +VL K+A ++ NRL+ F+
Sbjct: 176 RKVHNPEH-LSKFRPISLCNVLYKIASKVLANRLKLFL 212
>02_03_0080 +
14935664-14935796,14943858-14944175,14944352-14945199,
14945249-14945521
Length = 523
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -1
Query: 205 PETWKSQEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRL-EWFIENNNFIANS 29
PE+W + +AI+ + + +A+Y P+AL+ L + + W ++FIAN
Sbjct: 84 PESWLTIYGLAIRAAGRDSKVMANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANF 143
Query: 28 QYGF 17
Q F
Sbjct: 144 QGTF 147
>10_03_0002 - 6858257-6861205
Length = 982
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -1
Query: 205 PETWKSQEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRL-EWFIENNNFIANS 29
PE+W + +AI+ + +A+Y P+AL+ L + + W ++FIAN
Sbjct: 452 PESWLTVYGLAIRAAGGDSKAMANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANF 511
Query: 28 QYGFGHRP 5
Q G RP
Sbjct: 512 Q-GTFERP 518
>06_03_0742 +
24027506-24027721,24028835-24029004,24029893-24030052,
24030162-24030455,24031490-24031717,24031827-24032006,
24032079-24032238,24032591-24032617,24033426-24033613,
24034269-24034532,24035123-24035218,24035311-24035399,
24035473-24035620,24035842-24036051,24036141-24036440,
24037906-24038248,24038747-24038952,24039071-24039273,
24040021-24040117,24040148-24040222,24040328-24040602,
24041116-24041256,24041469-24042339,24042481-24042520,
24042605-24043050
Length = 1808
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 489 DDKDSLKADRNRLILRQTSVGHVEGDKEVQNVFQPSCFLSLRNLRVIQITSLRISKFSLD 668
+D D+ K+ + I GH+E K + F P F+SL+NL +Q+T KF L+
Sbjct: 125 NDTDTCKSCGQQSIRCPGHFGHIELAKPL---FNPLLFMSLKNL--LQVTCFHCHKFRLN 179
>08_02_0132 +
12908995-12909437,12909727-12910211,12910417-12910988,
12911080-12911211,12912184-12912939
Length = 795
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -1
Query: 211 NIPETWKSQEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNN 44
+IPE W+S + K P++P + + A +L +A V+ R ++ NNN
Sbjct: 138 SIPEAWESLQEKGHKAPSRPWTHTSRVKSAASWVILGMIARKPVRRRT--YMGNNN 191
>11_08_0032 -
27807489-27807497,27807641-27807684,27808046-27808168,
27810770-27810983,27811382-27811530,27811719-27812618,
27812964-27814659
Length = 1044
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 286 SFLSHLGNSALMYFLNLINSVMVTGNIP 203
S HLGN + +Y LNL N+ +TG +P
Sbjct: 96 SITPHLGNLSFLYVLNLANT-SLTGTLP 122
>11_08_0026 + 27752519-27755441,27755538-27755923
Length = 1102
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -1
Query: 277 SHLGNSALMYFLNLINSVMVTGNIPE 200
SHLGN + + LNL N+ +TG++PE
Sbjct: 96 SHLGNLSFLSVLNLTNA-SLTGSVPE 120
>12_01_0991 -
10057736-10058249,10058412-10059241,10059266-10060633,
10061785-10062327,10066274-10066498,10066590-10066640
Length = 1176
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 614 EFTCNTNNFIENI*VFIGHVLSIDSLSYLSFTYSIHTFSIPP 739
+ +CN N+ + I VF+G S+ SL YL+ +Y S+PP
Sbjct: 405 DLSCNNFNWSQ-IPVFLG---SLPSLRYLNLSYGFFYGSVPP 442
>11_06_0075 - 19829016-19829399
Length = 127
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 364 PFSLHELKGVLSHV-KDSSPGQDGIMYSFLSHLGNSALMYFLNLINSVMVTGNI 206
PF+ E+ V++ + D SPG DG FL G+ F + + M+ ++
Sbjct: 63 PFAHEEINKVVASLPSDKSPGPDGFNGDFLKACGDIVKEDFTHFVKGFMMAQSV 116
>07_03_1436 - 26543846-26546806
Length = 986
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -1
Query: 205 PETWKSQEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLVKNRL-EWFIENNNFIANS 29
PE+W + +AI+ + +A+Y P+AL L + + W ++FIAN
Sbjct: 455 PESWLTVYGLAIRAVGGGSKAMANYLPVALVDSARSWLHGLPRGTIGSWAELRDHFIANF 514
Query: 28 QYGFGHRP 5
Q G RP
Sbjct: 515 Q-GTFERP 521
>05_01_0397 -
3129679-3130144,3130655-3131104,3132215-3132273,
3133136-3133305,3134655-3134771,3134980-3135166
Length = 482
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 658 FHWTCPQHRLSQLPFFYLQHPYILYPTMEDMESYXMDFV*Q 780
FHW CP RL+QLP F+ YI + D+ DF+ Q
Sbjct: 162 FHW-CPFGRLAQLPSFF---DYIEFEICLDIGHAVHDFMGQ 198
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,183,663
Number of Sequences: 37544
Number of extensions: 346182
Number of successful extensions: 947
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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