BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P02_F_O15 (826 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g77530.1 68414.m09028 O-methyltransferase family 2 protein si... 34 0.13 At1g77520.1 68414.m09027 O-methyltransferase family 2 protein si... 33 0.23 At1g63140.2 68414.m07136 O-methyltransferase, putative similar t... 30 1.6 At1g63140.1 68414.m07135 O-methyltransferase, putative similar t... 30 1.6 At5g52280.1 68418.m06488 protein transport protein-related low s... 28 6.5 At3g53090.1 68416.m05851 HECT-domain-containing protein / ubiqui... 28 6.5 At5g37170.1 68418.m04462 O-methyltransferase family 2 protein si... 28 8.7 At5g03830.1 68418.m00352 expressed protein hypothetical protein ... 28 8.7 At2g46250.1 68415.m05751 myosin heavy chain-related contains wea... 28 8.7 >At1g77530.1 68414.m09028 O-methyltransferase family 2 protein similar to caffeic acid 3-O-methyltransferase GB:O23760 [Clarkia breweri], [SP|Q00763] [Populus tremuloides] Length = 381 Score = 33.9 bits (74), Expect = 0.13 Identities = 19/55 (34%), Positives = 28/55 (50%) Frame = -1 Query: 244 LNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLV 80 L +I+++ N TW S IA+ PNKPTN A P+ L +L + H + Sbjct: 52 LGVIDTIAAASN--GTWLSPSEIAVSLPNKPTNPEA---PVLLDRMLRLLVSHSI 101 >At1g77520.1 68414.m09027 O-methyltransferase family 2 protein similar to caffeic acid 3-O-methyltransferase GB:O23760 [Clarkia breweri], [SP|Q00763] [Populus tremuloides] Length = 381 Score = 33.1 bits (72), Expect = 0.23 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = -1 Query: 244 LNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLV 80 L +I+++ GN +TW S IA P KPTN A P+ L +L+ + H + Sbjct: 52 LGVIDTIAAAGN--DTWLSPCEIACSLPTKPTNPEA---PVLLDRMLSLLVSHSI 101 >At1g63140.2 68414.m07136 O-methyltransferase, putative similar to GI:2781394 Length = 381 Score = 30.3 bits (65), Expect = 1.6 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = -1 Query: 223 MVTGNIPETWKSQEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLV 80 M+T W S IA+ P KPTN A P+ L +L +A H + Sbjct: 57 MITSVDDGVWLSPSEIALGLPTKPTNPEA---PVLLDRMLVLLASHSI 101 >At1g63140.1 68414.m07135 O-methyltransferase, putative similar to GI:2781394 Length = 286 Score = 30.3 bits (65), Expect = 1.6 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = -1 Query: 223 MVTGNIPETWKSQEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEHLV 80 M+T W S IA+ P KPTN A P+ L +L +A H + Sbjct: 57 MITSVDDGVWLSPSEIALGLPTKPTNPEA---PVLLDRMLVLLASHSI 101 >At5g52280.1 68418.m06488 protein transport protein-related low similarity to SP|P25386 Intracellular protein transport protein USO1 {Saccharomyces cerevisiae} Length = 853 Score = 28.3 bits (60), Expect = 6.5 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +1 Query: 379 KSHLSKMILKESRSIHQLMEELICLK 456 K L K +KES+ I +L +E+ CLK Sbjct: 287 KQSLRKQAIKESKRIQELSKEVSCLK 312 >At3g53090.1 68416.m05851 HECT-domain-containing protein / ubiquitin-transferase family protein / IQ calmodulin-binding motif-containing protein contains Pfam profiles PF00632: HECT-domain (ubiquitin-transferase), PF00612: IQ calmodulin-binding motif Length = 1142 Score = 28.3 bits (60), Expect = 6.5 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +3 Query: 45 LLFSINHSKRFFTRCSATLVKTEDSAIGLYEATSLVGLLGFLIAITSCDF 194 LL SIN + + + CS + +EDS + +V L FL +T C++ Sbjct: 122 LLESINSNDQGYNFCSLAVGTSEDSKTWACQTRRMVSLCSFL--LTECNY 169 >At5g37170.1 68418.m04462 O-methyltransferase family 2 protein similar to caffeic acid 3-O-methyltransferase [Populus tremuloides][SP|Q00763] Length = 334 Score = 27.9 bits (59), Expect = 8.7 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Frame = -1 Query: 262 SALMYFLNLINSVMVTGNIPETWKSQEVIAIKKPNKPTNDVASYRPIALSSVLTKVAEH- 86 S M L + NS+ + W S IA P KPTN A P+ + +L + H Sbjct: 30 SMQMQALRITNSLAFPMGV---WLSPSEIAFGLPTKPTNPEA---PMLIDRMLRLLVSHS 83 Query: 85 LVKNRLEWFIENN 47 ++K RL ENN Sbjct: 84 ILKCRLVETGENN 96 >At5g03830.1 68418.m00352 expressed protein hypothetical protein F4I1.32, Arabidopsis thaliana, PIR:T02406 Length = 265 Score = 27.9 bits (59), Expect = 8.7 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +3 Query: 444 NLSKKAFVK---EGGSEEDDKDSLKADRNRLILRQTSVGHV 557 NLSKK K E EED + ++A LIL QT++G V Sbjct: 49 NLSKKGKEKSSLESSDEEDSQGDVQAGFVDLILNQTALGTV 89 >At2g46250.1 68415.m05751 myosin heavy chain-related contains weak similarity to Myosin heavy chain, muscle (Swiss-Prot:P05661) [Drosophila melanogaster] Length = 468 Score = 27.9 bits (59), Expect = 8.7 Identities = 11/36 (30%), Positives = 21/36 (58%) Frame = +1 Query: 367 SLKRKSHLSKMILKESRSIHQLMEELICLKRHLLKK 474 S+KR+ + + KES ++H+ + +C +H L K Sbjct: 229 SIKRELDDERKVRKESETLHRKLTRELCEAKHCLSK 264 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,134,673 Number of Sequences: 28952 Number of extensions: 307841 Number of successful extensions: 980 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 956 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 980 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1892353600 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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