Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_O14
(417 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 130 9e-30
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 100 1e-20
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 100 1e-20
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 81 7e-15
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 78 6e-14
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 78 8e-14
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 74 1e-12
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 73 2e-12
UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, wh... 72 6e-12
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 60 2e-08
UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia intestina... 59 4e-08
UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza sativa... 48 8e-05
UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35... 46 3e-04
UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4; T... 46 4e-04
UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ sp|P6... 44 0.001
UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniper... 44 0.002
UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein ORF-c4... 38 0.083
UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, wh... 35 0.78
UniRef50_A7PQ24 Cluster: Chromosome chr18 scaffold_24, whole gen... 34 1.0
UniRef50_A5BMW0 Cluster: Putative uncharacterized protein; n=1; ... 33 2.4
UniRef50_A5FGD8 Cluster: Phage integrase family protein; n=1; Fl... 32 4.1
UniRef50_Q4Z2R9 Cluster: Putative uncharacterized protein; n=3; ... 32 4.1
UniRef50_Q06SJ3 Cluster: Chloroplast 30S ribosomal protein S4; n... 32 5.5
UniRef50_Q7Z7F7 Cluster: 39S ribosomal protein L55, mitochondria... 31 7.2
UniRef50_UPI0000F1D785 Cluster: PREDICTED: similar to LOC553316 ... 31 9.6
UniRef50_Q8B590 Cluster: Putative uncharacterized protein; n=1; ... 31 9.6
UniRef50_Q4Y885 Cluster: Putative uncharacterized protein; n=7; ... 31 9.6
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 130 bits (315), Expect = 9e-30
Identities = 65/96 (67%), Positives = 75/96 (78%)
Frame = +1
Query: 10 LTNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKK 189
L+ LRVAKVTGG ASKLSK+RVV K+IARV V +Q K NLR YK KKYKPLDLR KK
Sbjct: 28 LSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKK 87
Query: 190 TRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 297
TRAMR+ L KHE +KT+K+ RK+ L+P R YAVKA
Sbjct: 88 TRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 100 bits (240), Expect = 1e-20
Identities = 49/95 (51%), Positives = 64/95 (67%)
Frame = +1
Query: 10 LTNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKK 189
L+ LRV K+ G +SK ++ V K+IARV V + + LR YKNKKY PLDLR +
Sbjct: 91 LSQLRVQKIAAGASSKTQRIHDVRKSIARVLTVINANQRAQLRLFYKNKKYTPLDLRPRL 150
Query: 190 TRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 294
TRA+R+ LTKHEA +KT K+ +K+ FP R YAVK
Sbjct: 151 TRALRRRLTKHEATLKTEKQRKKEIHFPQRKYAVK 185
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 100 bits (240), Expect = 1e-20
Identities = 52/96 (54%), Positives = 65/96 (67%)
Frame = +1
Query: 10 LTNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKK 189
L LRV+KVTGG ASKLSK+RVV K IAR+ V +Q K LR Y + KYKP+DLR KK
Sbjct: 28 LATLRVSKVTGGAASKLSKIRVVRKNIARLLTVINQTQKQELRKFYADHKYKPIDLRLKK 87
Query: 190 TRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 297
TRA+R+ LT HE +++ K+ K R +AVKA
Sbjct: 88 TRAIRRRLTAHELSLRSAKQQAKSRNQAVRKFAVKA 123
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 81.4 bits (192), Expect = 7e-15
Identities = 44/96 (45%), Positives = 57/96 (59%)
Frame = +1
Query: 10 LTNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKK 189
L RV+KVT SKLSK+ +V KA+A+V VY+Q+ K R YK PL+LR K
Sbjct: 47 LATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYNQRKKEEARKKYKKLSKTPLNLRPKL 106
Query: 190 TRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 297
TRA RK LT + +KT KE ++ P R YA+ A
Sbjct: 107 TRAKRKGLTTKQLTMKTIKERKRAENLPKRKYALLA 142
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 78.2 bits (184), Expect = 6e-14
Identities = 42/96 (43%), Positives = 58/96 (60%)
Frame = +1
Query: 10 LTNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKK 189
L +LRV + TG +KLS++ VV K IAR+ + Q+ +LR + K+ PLDLR K
Sbjct: 31 LASLRVIQSTGTAPNKLSRINVVRKGIARILTILSQRNIKSLREKHAGSKFMPLDLRKKL 90
Query: 190 TRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 297
TRA R+ALT +AK T K +K FP R +A+ A
Sbjct: 91 TRAKRRALTPQQAKKMTVKASKKALNFPKRKFAIIA 126
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 77.8 bits (183), Expect = 8e-14
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = +1
Query: 10 LTNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKK 189
L NLRV KV GG +SK+ ++ + K IARV V +QK + NLR YK K PLDLRAKK
Sbjct: 101 LLNLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQKQRANLREFYKGKSQIPLDLRAKK 160
Query: 190 TRAMRKALTKHEAKIKTRK 246
TRA+R+ L + +++++
Sbjct: 161 TRAIRRKLNQQRFAMRSQR 179
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 74.1 bits (174), Expect = 1e-12
Identities = 41/94 (43%), Positives = 56/94 (59%)
Frame = +1
Query: 10 LTNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKK 189
L+ LR++K G A K SK+ V K +ARV VY+QK K+ LR YKNKK+KP +LR K
Sbjct: 28 LSGLRISKALGNSA-KNSKIHGVRKNVARVLTVYNQKRKMELRQLYKNKKFKPYNLRKKL 86
Query: 190 TRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAV 291
T+ R L+ + T ++ +K FP R Y V
Sbjct: 87 TKNKRLQLSPKQKAAMTLRQKKKVQNFPQRKYLV 120
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 73.3 bits (172), Expect = 2e-12
Identities = 39/98 (39%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Frame = +1
Query: 10 LTNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYK---PLDLR 180
L+ LRV + TGG ++L ++R + K+IAR+ V +Q + NL+ Y ++K + P LR
Sbjct: 29 LSQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQNERSNLKMFYADRKLRCKTPKVLR 88
Query: 181 AKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 294
K T R AL ++E KT +++R+ FP RVYAVK
Sbjct: 89 TKLTHRRRLALKENEKNRKTSRQMRQAHKFPKRVYAVK 126
>UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=9; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_44, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 125
Score = 71.7 bits (168), Expect = 6e-12
Identities = 36/95 (37%), Positives = 61/95 (64%)
Frame = +1
Query: 10 LTNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKK 189
L LR KV+ G A KL ++ +V K IA+ V +++ + +++N K+ P+DLR KK
Sbjct: 30 LIQLRTVKVSAGNAQKLGRIGLVRKRIAKFLTVINEQRRNSVKNAAKSSTKLPVDLRGKK 89
Query: 190 TRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 294
TRA+R+ LT+ E KT+++ ++ + FP R +A+K
Sbjct: 90 TRAIRQRLTRSERAQKTQRQWKRLNNFPLRKFALK 124
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 60.1 bits (139), Expect = 2e-08
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = +1
Query: 124 KVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 297
K NL YK KKYK L LR KKTRA+R+ L+KHE + +K+ + + L P R AVKA
Sbjct: 43 KENLGKFYKGKKYKHLHLRPKKTRAVRRPLSKHEENLTIKKQQQSEQLSPVRKCAVKA 100
>UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia
intestinalis|Rep: GLP_2_9191_9649 - Giardia lamblia ATCC
50803
Length = 152
Score = 58.8 bits (136), Expect = 4e-08
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = +1
Query: 10 LTNLRVAKVTGG-VASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAK 186
L +LR K T G V ++++ RV K +ARV V +QK + R ++ ++ P R +
Sbjct: 56 LLSLRTMKATAGPVPERIARFRVCKKDVARVLTVINQKARDEARAAFEGAEHIPKTFRPR 115
Query: 187 KTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 294
T AMR LT+ + ++ K +++K FP YAVK
Sbjct: 116 LTHAMRCQLTEKQKRLLPSKLMKRKLQFPKLKYAVK 151
>UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza
sativa|Rep: Os06g0732000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 48.0 bits (109), Expect = 8e-05
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Frame = +1
Query: 10 LTNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYK--PLDLRA 183
L+ LRVA+VTGG +KLS + K++ LR YK KK PLDLR
Sbjct: 135 LSVLRVARVTGGAPNKLSNI----------------KVRTALREAYKKKKKSLLPLDLRP 178
Query: 184 KKTRAMRKALTKHEAKI 234
KKT A+R+ LTKH+ +
Sbjct: 179 KKTCAIRRRLTKHQGML 195
>UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35;
n=2; Encephalitozoon cuniculi|Rep: Similarity to 60S
ribosomal protein L35 - Encephalitozoon cuniculi
Length = 122
Score = 46.0 bits (104), Expect = 3e-04
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = +1
Query: 10 LTNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYK--PLDLRA 183
L LR K +G V + + ++ K +AR V +K+ L Y+ P +LR
Sbjct: 27 LAALRQKKNSGDVGA--NDIKTAKKNLARALTVRREKILEELVEAYRGTPVSKLPKELRP 84
Query: 184 KKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 288
K R+ R+ALTK + + KTR++ + S FP ++A
Sbjct: 85 KLNRSKRRALTKTQLRRKTRRQRARMSKFPRVIFA 119
>UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L29,
putative - Trichomonas vaginalis G3
Length = 124
Score = 45.6 bits (103), Expect = 4e-04
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +1
Query: 10 LTNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKK 189
L L+ K A+KL++++ + +ARV + + L+ Y K P+DLR +
Sbjct: 28 LFELKGQKAASAAATKLTEIKNTRRDVARVKSILMVSQRKALQEKYAKAKLVPIDLRKHQ 87
Query: 190 TRAMRKALT-KHEAKIKTRKEIRKKSLFPPRVYAVKA 297
+++R L K+ K+ ++ R K LF R +A+KA
Sbjct: 88 EKSLRNKLAPKYANKLTAQESRRHKCLF-ERKFALKA 123
>UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ
sp|P63968|DNAJ_NEIMA Chaperone protein dnaJ
gb|AAF40528.1| dna; n=2; Ostreococcus|Rep: DNAJ_NEIMB
Chaperone protein dnaJ sp|P63968|DNAJ_NEIMA Chaperone
protein dnaJ gb|AAF40528.1| dna - Ostreococcus tauri
Length = 575
Score = 44.0 bits (99), Expect = 0.001
Identities = 36/92 (39%), Positives = 40/92 (43%)
Frame = -2
Query: 296 ALTA*TLGGKRDFFLISFLVLIFASCLVRALRIARVFLALKSKGXXXXXXXXXXXXXXXF 117
AL+A GK F V S LV+A R+ARVF KS G
Sbjct: 394 ALSAYLRCGKAASFFAWRAVFAPFSDLVKARRMARVFFLRKSSGWYFAPSYADRKDANCL 453
Query: 116 W*YTM*TRAIALLTTRSLDSLEATPPVTLATR 21
W T+ AIA T L SL PPVTLATR
Sbjct: 454 WRITVRVCAIANRTCLILLSLPGAPPVTLATR 485
>UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniperca
chuatsi|Rep: 60S ribosomal protein L35 - Siniperca
chuatsi (Chinese perch)
Length = 57
Score = 43.6 bits (98), Expect = 0.002
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 163 KPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKK-SLFPPRV 282
KPLDLR KKTR +R+ L KHE ++T+K ++ L P++
Sbjct: 1 KPLDLRPKKTRVLRRRLNKHEESLRTKKTAEERPPLLDPQI 41
>UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein
ORF-c40_015; n=1; Sulfolobus solfataricus|Rep: Putative
uncharacterized protein ORF-c40_015 - Sulfolobus
solfataricus
Length = 360
Score = 37.9 bits (84), Expect = 0.083
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +1
Query: 37 TGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKA-- 210
T G+ S L K ++ IV+ QK+K +L +Y+NK + K+R+ RKA
Sbjct: 183 TVGLNSMLHKFELIYTIDPDYIIVFDQKIKDSLPENYRNKAILLKSVNLHKSRSERKANR 242
Query: 211 LTKHEAKIKTRKEIRKKS 264
+ K+E K K I+ S
Sbjct: 243 IAKYERYFKEAKNIKTLS 260
>UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 485
Score = 34.7 bits (76), Expect = 0.78
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 94 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKE 249
R Y++ +Q + + L N YKN+K +R+ K +K K KIK RK+
Sbjct: 280 RNYLIQNQIIILQLSNSYKNRKLSKKKIRSLKKSKKKKFKLKSILKIKKRKK 331
>UniRef50_A7PQ24 Cluster: Chromosome chr18 scaffold_24, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_24, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1724
Score = 34.3 bits (75), Expect = 1.0
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +1
Query: 4 PALTNLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRA 183
P LT LR+ ++G SKL K + S + R+Y V+ + RN++ + YK LD +
Sbjct: 806 PKLTLLRILTLSG--CSKLGKFQQNSGNLDRLYAVFLSFRGEDTRNNFTSHLYKALDQKG 863
Query: 184 KKT 192
+T
Sbjct: 864 IET 866
>UniRef50_A5BMW0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 33.1 bits (72), Expect = 2.4
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 55 KLSKLRVVSKAIARVYIVYHQKMKVNLRNHYK-NKKYKPLDLRAKKTRAMRKALTKHEAK 231
+L K + K + Y+ QK ++ R K NK+ K L + +K + K K + +
Sbjct: 110 QLKKKKKKKKKQKKQYLEKKQKKQLKKRKKKKKNKQNKQLTKKLRKQKMKNKKXKKQKKQ 169
Query: 232 IKTRKEIRKK 261
K RK+++KK
Sbjct: 170 RKQRKQLKKK 179
>UniRef50_A5FGD8 Cluster: Phage integrase family protein; n=1;
Flavobacterium johnsoniae UW101|Rep: Phage integrase
family protein - Flavobacterium johnsoniae UW101
Length = 386
Score = 32.3 bits (70), Expect = 4.1
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Frame = +1
Query: 79 SKAIAR-VYIVYHQKMKVNLRNHYKNKKYKPLDLRA-----KKTRAMRKALTKHEAK 231
S IAR + YH K+K L+N YK +K + D+ A K+ + R LT EAK
Sbjct: 167 SSTIARNTALSYHNKLKTTLKNAYKEQKLR-TDINAGIDSIKEQESQRNFLTLKEAK 222
>UniRef50_Q4Z2R9 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 819
Score = 32.3 bits (70), Expect = 4.1
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +1
Query: 16 NLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 195
N+RV + V SK ++ +++K + Y ++ K+ +N Y+N+K K + KT+
Sbjct: 559 NVRVYVLIKNVVSK-KQIDIMNKLEGEQKLRYKERKKIREQNLYRNEKIKDRNGNHLKTK 617
Query: 196 AMRKALTKHEAK 231
L HE K
Sbjct: 618 NEEYYLLPHEKK 629
>UniRef50_Q06SJ3 Cluster: Chloroplast 30S ribosomal protein S4; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S4 - Stigeoclonium helveticum (Green alga)
Length = 2922
Score = 31.9 bits (69), Expect = 5.5
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 46 VASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKAL-TKH 222
V S+L +L+ R Y++ QK+K+ + + YK LDL+ K + + KAL K+
Sbjct: 2235 VFSRLYELKKAKTITERKYVLIKQKLKIF--SLFSALNYKLLDLKEKGSISSSKALELKN 2292
Query: 223 EAKIKTRKEIRKKSLFPPRVYAVKA 297
+ K ++++K F ++KA
Sbjct: 2293 QIIQKISQKMKKVKTFAKFKQSLKA 2317
>UniRef50_Q7Z7F7 Cluster: 39S ribosomal protein L55, mitochondrial
precursor; n=17; Eutheria|Rep: 39S ribosomal protein
L55, mitochondrial precursor - Homo sapiens (Human)
Length = 128
Score = 31.5 bits (68), Expect = 7.2
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +1
Query: 4 PALTNLRVAKVTGGVASKLSKLRVVSKAIARVY---IVYHQKMKVNLRNHYKNKKYK-PL 171
PAL L + +S+ S RV +A AR+Y +V +++R + P+
Sbjct: 21 PALRRLHTSSWRAD-SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPI 79
Query: 172 DLRAKKTRAMRKALTKHEAKIKTRKEIRKK 261
DL R L K EA++++RKE ++
Sbjct: 80 DLDTLSPEERRARLRKREAQLQSRKEYEQE 109
>UniRef50_UPI0000F1D785 Cluster: PREDICTED: similar to LOC553316
protein; n=2; Danio rerio|Rep: PREDICTED: similar to
LOC553316 protein - Danio rerio
Length = 284
Score = 31.1 bits (67), Expect = 9.6
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 61 SKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKH-EAKIK 237
SK K +A+++ + +K+N HY + + KP+ R +K + + K EA+I
Sbjct: 170 SKAECDLKHVAKLFKSIDEMVKMNRGQHY-SSEIKPISQRQEKNERVTQGEPKRLEAQIN 228
Query: 238 TRKEIRKKS 264
K+I+ K+
Sbjct: 229 IDKDIKTKT 237
>UniRef50_Q8B590 Cluster: Putative uncharacterized protein; n=1;
Choristoneura fumiferana granulovirus|Rep: Putative
uncharacterized protein - Choristoneura fumiferana
granulovirus (CfGV)
Length = 365
Score = 31.1 bits (67), Expect = 9.6
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +1
Query: 16 NLRVAKVTGGVASKLSKLRVVSKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 195
N ++ K + K +KL+ + I + + ++K K N+ NK+++ + R K +
Sbjct: 259 NTKLEKDLDDIKEKNTKLKKENTTIKKTFRKIYRK-KYNI-----NKRFRQIKKRKYKLK 312
Query: 196 AMRKALTKHEAKIKTRK-EIRK-KSLFPPRVYAVK 294
+ L KH+ KI+ K +IRK K R Y +K
Sbjct: 313 KRFRRLRKHKNKIRKHKNKIRKRKYKLKKRKYKLK 347
>UniRef50_Q4Y885 Cluster: Putative uncharacterized protein; n=7;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 1729
Score = 31.1 bits (67), Expect = 9.6
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +1
Query: 100 YIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRK 246
Y++ ++ +K+ +R K+ K L + KK + M+K K+ +K+KT+K
Sbjct: 288 YLMKNKILKMKIRRKEIEKEKKLLRDQKKKKKNMKKKNGKNSSKVKTKK 336
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 256,776,202
Number of Sequences: 1657284
Number of extensions: 3854715
Number of successful extensions: 15211
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 14659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15154
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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