Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_O13
(741 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56| Best HMM Match : Actin (HMM E-Value=0) 456 e-128
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 456 e-128
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 455 e-128
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 452 e-127
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 352 2e-97
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 245 3e-65
SB_54| Best HMM Match : Actin (HMM E-Value=0) 214 7e-56
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 210 1e-54
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 200 1e-51
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 171 4e-43
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 105 3e-23
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 79 5e-15
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 66 3e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 3e-09
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 57 2e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 3e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.003
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5) 32 0.42
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.98
SB_32468| Best HMM Match : Drf_FH1 (HMM E-Value=2.6) 31 0.98
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.98
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 1.3
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 30 2.3
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 29 4.0
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 5.2
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6) 28 9.1
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 456 bits (1123), Expect = e-128
Identities = 213/217 (98%), Positives = 216/217 (99%)
Frame = +1
Query: 91 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 270
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 7 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 66
Query: 271 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 450
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 67 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126
Query: 451 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 630
FNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT
Sbjct: 127 FNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186
Query: 631 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALXF 741
DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL F
Sbjct: 187 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 223
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 456 bits (1123), Expect = e-128
Identities = 213/217 (98%), Positives = 216/217 (99%)
Frame = +1
Query: 91 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 270
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 271 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 450
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 451 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 630
FNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT
Sbjct: 128 FNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 631 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALXF 741
DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL F
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 224
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 455 bits (1122), Expect = e-128
Identities = 212/219 (96%), Positives = 217/219 (99%)
Frame = +1
Query: 85 LLALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 264
+ ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI
Sbjct: 6 IAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 265 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 444
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 445 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 624
ETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRD
Sbjct: 126 ETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRD 185
Query: 625 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALXF 741
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL F
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 224
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 452 bits (1114), Expect = e-127
Identities = 212/217 (97%), Positives = 215/217 (99%)
Frame = +1
Query: 91 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 270
ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 7 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 66
Query: 271 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 450
LKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 67 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126
Query: 451 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 630
FNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT
Sbjct: 127 FNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 186
Query: 631 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALXF 741
DYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL F
Sbjct: 187 DYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDF 223
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 352 bits (866), Expect = 2e-97
Identities = 177/219 (80%), Positives = 183/219 (83%)
Frame = +1
Query: 85 LLALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 264
+ ALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI
Sbjct: 6 IAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
Query: 265 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 444
LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 445 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 624
ETFNSPAMYVAIQAVLSLYASGRTTGIV+DS G + H +
Sbjct: 126 ETFNSPAMYVAIQAVLSLYASGRTTGIVMDS------------GDGVSHTV--------- 164
Query: 625 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALXF 741
I ERGYSFTTTAEREIVRDIKEKLCYVAL F
Sbjct: 165 ------PIYEERGYSFTTTAEREIVRDIKEKLCYVALDF 197
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 245 bits (599), Expect = 3e-65
Identities = 113/215 (52%), Positives = 153/215 (71%), Gaps = 3/215 (1%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 267
+V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R +L
Sbjct: 9 IVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRYML 68
Query: 268 TLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 444
+ YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++MF
Sbjct: 69 EVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEVMF 128
Query: 445 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 624
E + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD
Sbjct: 129 ENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRD 188
Query: 625 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 729
+T YL+K++ RGY+F TA+ E VR +KEKLCYV
Sbjct: 189 ITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYV 223
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 214 bits (522), Expect = 7e-56
Identities = 95/140 (67%), Positives = 118/140 (84%)
Frame = +1
Query: 322 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 501
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 502 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 681
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 682 AEREIVRDIKEKLCYVALXF 741
AE++I+RD+KE LCY A+ +
Sbjct: 2249 AEQQIIRDLKETLCYCAMDY 2268
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 195
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 210 bits (512), Expect = 1e-54
Identities = 100/109 (91%), Positives = 105/109 (96%)
Frame = +1
Query: 415 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 594
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 595 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALXF 741
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL F
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 186
Score = 175 bits (426), Expect = 3e-44
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = +1
Query: 91 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 270
ALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT
Sbjct: 7 ALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 66
Query: 271 LKYPIEHGIITNWDDMEKIWHHTF 342
LKYPIEHGI+TNWDDMEKI TF
Sbjct: 67 LKYPIEHGIVTNWDDMEKIMFETF 90
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 200 bits (487), Expect = 1e-51
Identities = 94/102 (92%), Positives = 98/102 (96%)
Frame = +1
Query: 436 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 615
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 616 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALXF 741
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVAL F
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDF 102
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 171 bits (417), Expect = 4e-43
Identities = 74/116 (63%), Positives = 101/116 (87%)
Frame = +1
Query: 370 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 549
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 550 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 717
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 105 bits (253), Expect = 3e-23
Identities = 48/126 (38%), Positives = 80/126 (63%)
Frame = +1
Query: 280 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 459
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 460 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 639
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 640 MKILTE 657
++ E
Sbjct: 123 RQMFEE 128
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 78.6 bits (185), Expect = 5e-15
Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +1
Query: 481 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 657
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 658 RGYSFTTTAEREIVRDIKEKLCYVA 732
RG++FT+++ +IV DIKEK+CY++
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLS 851
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Frame = +1
Query: 91 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYVGDEAQSKRG 261
A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD GD A +K G
Sbjct: 702 AIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKYGDAAVAKSG 761
Query: 262 ILTL 273
++ L
Sbjct: 762 VMHL 765
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 66.1 bits (154), Expect = 3e-11
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 8/93 (8%)
Frame = +1
Query: 475 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 630
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 631 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 729
++ ++L ER E + IKE+ Y+
Sbjct: 100 FFVQQLLREREMGIPPEQSMETAKTIKERWGYI 132
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 195
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 56.8 bits (131), Expect = 2e-08
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 8/181 (4%)
Frame = +1
Query: 85 LLALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 264
+ LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284
Query: 265 LTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 438
L Y P + G + NWD ++IW +TF E + M +I
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEI 324
Query: 439 MFETFNSPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 600
+FE +N A+ A LS Y S +V+D+G +H VP++ G + A+
Sbjct: 325 LFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAVR 384
Query: 601 R 603
R
Sbjct: 385 R 385
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +1
Query: 208 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 387
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.42
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 517 TGIVLDSGDGVSHTVPI 567
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = -1
Query: 192 VARATHDGREDGAGRVVAGETGLAHAGAIVD 100
+AR+ DG E+G+G +V+GETGLAH GAI+D
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIID 31
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 325 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 504
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 505 SGRTTGIV 528
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 101 STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 247
S P+ R TT+P P +PSWV + + W TW RP
Sbjct: 36 SPSKPSDTRIADTTTTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5)
Length = 257
Score = 32.3 bits (70), Expect = 0.42
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = -1
Query: 693 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGV----GDTISGVEH 526
F +SG + D H++ + +TS V+ + G + D + T S E
Sbjct: 134 FGISGTANTEEQIDVDKHQITNKASTSSVEKANTAGTTGGTQDQHATQGNKASTCSFEEA 193
Query: 525 DTGGTTGGVQ 496
+T GTTGG Q
Sbjct: 194 NTAGTTGGTQ 203
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 31.5 bits (68), Expect = 0.74
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 197 PWWRGRPTMDGKTARGASSPAKPALHMPEPLSTTSAS 87
P W + G T R PAKP+L++P P S T +S
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSPPSKTPSS 566
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.98
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 271 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 423
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_32468| Best HMM Match : Drf_FH1 (HMM E-Value=2.6)
Length = 416
Score = 31.1 bits (67), Expect = 0.98
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 35 SVPNTNTHKVQDVRRRCCLRL*STMAPACARPVSPATTRPAPSSRPSWV 181
SVP ++ V + CC+R S P C R + P R +P V
Sbjct: 354 SVPCPYVNRAVSVCQPCCVRTVSVCQPCCVRTICPYVNRAVSVCQPCCV 402
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.1 bits (67), Expect = 0.98
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 191 WRGRPTMDGKTARGASSPAKPALHMPEPLSTTSAS 87
W + G T R PAKPAL++P P S T +S
Sbjct: 72 WLQQVKDGGNTNRRTRIPAKPALNLPSPPSKTPSS 106
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 167 GKTARGASSPAKPALHMPEPLSTTSAS 87
G T R PAKPAL++P P S T +S
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKTPSS 106
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 412 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 528
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 657 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVEHDTGG 514
L E + +V Q + GV S G+G G TISG D+GG
Sbjct: 1474 LQEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGG 1521
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1
Query: 432 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSL 253
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D SL
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 252 AL 247
++
Sbjct: 214 SV 215
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -2
Query: 617 PAKSRRRMAWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNM 438
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 437 IWVIFSLLALGLR 399
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 29.1 bits (62), Expect = 4.0
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -2
Query: 557 VWE--TPSPESSTIPVVRPE-------AYSESTAWMATYMAGELKVSNMIWVIFSLLALG 405
VWE T P + T+P + + Y S +W+ L N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 404 LRGASVSSTGCSSGATRSSL*KVWCQIFSMSSQLVMIPCSMGYFRVRIPLLLWAS 240
L A + T C T +L ++ ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -1
Query: 600 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 502
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 415 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 564
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 400 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 528
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 191 WRGRPTMDGKTARGASSPAKPALHMPEPLSTTSAS 87
W + G T R AKPAL++P P S T +S
Sbjct: 32 WLQQVKDGGNTNRRTRIQAKPALNLPSPPSKTPSS 66
>SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6)
Length = 188
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -2
Query: 566 MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELK-VSNMIWVIFSLLALGLRGAS 390
M + + PSP P+A+ + A Y +G LK S V + L+ G G
Sbjct: 1 MAELADLPSPRMDWSSTDLPQAFKKFRATCELYFSGPLKEKSEPDKVSYLLIWTGDEGIE 60
Query: 389 VSSTGCSSGATRSSL*KVW 333
+SST S L W
Sbjct: 61 LSSTWALSADDSKKLDTYW 79
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,124,113
Number of Sequences: 59808
Number of extensions: 510990
Number of successful extensions: 1869
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1861
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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