Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_O12
(817 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical p... 359 1e-99
Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical p... 359 1e-99
U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein. 359 1e-99
AC091125-8|AAP46267.1| 353|Caenorhabditis elegans Hypothetical ... 57 1e-08
AC091125-7|AAK27890.1| 510|Caenorhabditis elegans Hypothetical ... 57 1e-08
AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical ... 30 1.7
AF024499-6|AAB70354.1| 560|Caenorhabditis elegans Hypothetical ... 29 4.0
U97007-7|AAB52292.1| 441|Caenorhabditis elegans Hypothetical pr... 29 5.3
>Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical
protein Y57G11C.10b protein.
Length = 459
Score = 359 bits (883), Expect = 1e-99
Identities = 171/251 (68%), Positives = 191/251 (76%), Gaps = 2/251 (0%)
Frame = +1
Query: 70 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 249
MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TPLE+L+ KF+ P
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTPLEQLYEKFHGPQ 60
Query: 250 --PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKV 423
P + GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKSIE S+V KGGKI KV
Sbjct: 61 AKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKSIEASFVVKGGKIYKV 120
Query: 424 PVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTANMQSLYDKFGLXR 603
P D+ EALA+ LMGMFEKRRF+ FL++VQ F E TW+ DP + MQ +Y+KFGL
Sbjct: 121 PADEMEALATSLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPHNSTMQQVYEKFGLDE 180
Query: 604 NTQDFTGHALALYLDDNYLQQPAIXTIRRIKLYSDXXXXXXXXXXXXXXXXXGELPQGXA 783
NT DFTGHALALY DD + QP + +I+LYSD GELPQG A
Sbjct: 181 NTADFTGHALALYRDDEHKNQPYAPAVEKIRLYSDSLARYGKSPYLYPLYGLGELPQGFA 240
Query: 784 RLSAIYGGTYM 816
RLSAIYGGTYM
Sbjct: 241 RLSAIYGGTYM 251
>Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical
protein Y57G11C.10a protein.
Length = 444
Score = 359 bits (883), Expect = 1e-99
Identities = 171/251 (68%), Positives = 191/251 (76%), Gaps = 2/251 (0%)
Frame = +1
Query: 70 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 249
MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TPLE+L+ KF+ P
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTPLEQLYEKFHGPQ 60
Query: 250 --PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKV 423
P + GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKSIE S+V KGGKI KV
Sbjct: 61 AKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKSIEASFVVKGGKIYKV 120
Query: 424 PVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTANMQSLYDKFGLXR 603
P D+ EALA+ LMGMFEKRRF+ FL++VQ F E TW+ DP + MQ +Y+KFGL
Sbjct: 121 PADEMEALATSLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPHNSTMQQVYEKFGLDE 180
Query: 604 NTQDFTGHALALYLDDNYLQQPAIXTIRRIKLYSDXXXXXXXXXXXXXXXXXGELPQGXA 783
NT DFTGHALALY DD + QP + +I+LYSD GELPQG A
Sbjct: 181 NTADFTGHALALYRDDEHKNQPYAPAVEKIRLYSDSLARYGKSPYLYPLYGLGELPQGFA 240
Query: 784 RLSAIYGGTYM 816
RLSAIYGGTYM
Sbjct: 241 RLSAIYGGTYM 251
>U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein.
Length = 444
Score = 359 bits (883), Expect = 1e-99
Identities = 171/251 (68%), Positives = 191/251 (76%), Gaps = 2/251 (0%)
Frame = +1
Query: 70 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA 249
MDEEYD IVLGTGLKECI+SGMLSVSGKKVLHIDRN YYGGESAS+TPLE+L+ KF+ P
Sbjct: 1 MDEEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTPLEQLYEKFHGPQ 60
Query: 250 --PDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYVYKGGKISKV 423
P + GRGRDWNVDLIPKFLMANG LVKLLIHTGVTRYLEFKSIE S+V KGGKI KV
Sbjct: 61 AKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKSIEASFVVKGGKIYKV 120
Query: 424 PVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTANMQSLYDKFGLXR 603
P D+ EALA+ LMGMFEKRRF+ FL++VQ F E TW+ DP + MQ +Y+KFGL
Sbjct: 121 PADEMEALATSLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPHNSTMQQVYEKFGLDE 180
Query: 604 NTQDFTGHALALYLDDNYLQQPAIXTIRRIKLYSDXXXXXXXXXXXXXXXXXGELPQGXA 783
NT DFTGHALALY DD + QP + +I+LYSD GELPQG A
Sbjct: 181 NTADFTGHALALYRDDEHKNQPYAPAVEKIRLYSDSLARYGKSPYLYPLYGLGELPQGFA 240
Query: 784 RLSAIYGGTYM 816
RLSAIYGGTYM
Sbjct: 241 RLSAIYGGTYM 251
>AC091125-8|AAP46267.1| 353|Caenorhabditis elegans Hypothetical
protein Y67D2.1b protein.
Length = 353
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +1
Query: 70 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT 210
+ E DV+VLGTGL E IL+ + +G VLH+DRN+YYGG+ +S T
Sbjct: 5 LPESVDVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGGDWSSFT 51
Score = 52.4 bits (120), Expect = 4e-07
Identities = 41/188 (21%), Positives = 78/188 (41%), Gaps = 8/188 (4%)
Frame = +1
Query: 274 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYV-----YKGGKISKVPVDQK 438
R +++DL+PK L++ G +V+ L + V+ Y EFK + G ++ VP +
Sbjct: 122 RRFSIDLVPKILLSKGAMVQTLCDSQVSHYAEFKLVNRQLCPTETPEAGITLNPVPCSKG 181
Query: 439 EALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTAN--MQSLYDKFGLXRNTQ 612
E S+ + + EKR F+ + + +D + + A+ ++ G+ + Q
Sbjct: 182 EIFQSNALSILEKRALMKFITFCTQWSTKDTEEGRKLLAEHADRPFSEFLEQMGVGKTLQ 241
Query: 613 DFTGHALALYLDDNYLQQPAIXT-IRRIKLYSDXXXXXXXXXXXXXXXXXGELPQGXARL 789
F + + + Q+P T + + D GEL Q RL
Sbjct: 242 SFIINTIGI-----LQQRPTAMTGMLASCQFMDSVGHFGPSPFLFPLYGCGELSQCFCRL 296
Query: 790 SAIYGGTY 813
+A++G Y
Sbjct: 297 AAVFGSLY 304
>AC091125-7|AAK27890.1| 510|Caenorhabditis elegans Hypothetical
protein Y67D2.1a protein.
Length = 510
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +1
Query: 70 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT 210
+ E DV+VLGTGL E IL+ + +G VLH+DRN+YYGG+ +S T
Sbjct: 5 LPESVDVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGGDWSSFT 51
Score = 52.4 bits (120), Expect = 4e-07
Identities = 41/188 (21%), Positives = 78/188 (41%), Gaps = 8/188 (4%)
Frame = +1
Query: 274 RDWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFKSIEGSYV-----YKGGKISKVPVDQK 438
R +++DL+PK L++ G +V+ L + V+ Y EFK + G ++ VP +
Sbjct: 122 RRFSIDLVPKILLSKGAMVQTLCDSQVSHYAEFKLVNRQLCPTETPEAGITLNPVPCSKG 181
Query: 439 EALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDPSTAN--MQSLYDKFGLXRNTQ 612
E S+ + + EKR F+ + + +D + + A+ ++ G+ + Q
Sbjct: 182 EIFQSNALSILEKRALMKFITFCTQWSTKDTEEGRKLLAEHADRPFSEFLEQMGVGKTLQ 241
Query: 613 DFTGHALALYLDDNYLQQPAIXT-IRRIKLYSDXXXXXXXXXXXXXXXXXGELPQGXARL 789
F + + + Q+P T + + D GEL Q RL
Sbjct: 242 SFIINTIGI-----LQQRPTAMTGMLASCQFMDSVGHFGPSPFLFPLYGCGELSQCFCRL 296
Query: 790 SAIYGGTY 813
+A++G Y
Sbjct: 297 AAVFGSLY 304
>AF036705-5|AAB95172.1| 544|Caenorhabditis elegans Hypothetical
protein F37C4.6 protein.
Length = 544
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 76 EEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 204
+ YD I++G G + L+ +GKKV ++R GG + +
Sbjct: 13 QSYDAIIIGGGHNGLTAAAYLTKAGKKVCVLERRHVVGGAAVT 55
>AF024499-6|AAB70354.1| 560|Caenorhabditis elegans Hypothetical
protein F42G2.2 protein.
Length = 560
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 659 K*LSSK*RARACPVKSWVFLXNPNLSYSD 573
K L++K R C + +W ++ +P+ SYSD
Sbjct: 269 KVLNNKRELRRCTMGNWFYIVHPDYSYSD 297
>U97007-7|AAB52292.1| 441|Caenorhabditis elegans Hypothetical
protein ZC196.3 protein.
Length = 441
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 430 DQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDP-STANMQSLYDKFGL 597
++KE +D + K+ + FL Y +DFQ A+ WK F + ++Q Y++ +
Sbjct: 253 EEKEEKVADWIQNCYKQPIKRFLEYFRDFQNV-AREWKYFKRLPSESLQDAYEEISI 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,063,851
Number of Sequences: 27780
Number of extensions: 413538
Number of successful extensions: 1050
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -