Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_O11
(809 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 297 2e-79
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 289 6e-77
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 287 2e-76
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 285 1e-75
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 276 6e-73
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 266 4e-70
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 257 2e-67
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 252 8e-66
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 252 1e-65
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 249 6e-65
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 245 1e-63
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 243 4e-63
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 243 5e-63
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 233 5e-60
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 225 1e-57
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 222 1e-56
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 217 2e-55
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 214 3e-54
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 206 5e-52
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 205 9e-52
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 202 8e-51
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 201 1e-50
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 201 2e-50
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 193 5e-48
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 190 5e-47
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 185 1e-45
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 182 7e-45
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 182 1e-44
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 181 2e-44
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 180 3e-44
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 178 1e-43
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 175 8e-43
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 175 8e-43
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 174 2e-42
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 173 4e-42
UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 172 1e-41
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 171 1e-41
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 171 1e-41
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 171 1e-41
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 171 2e-41
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 170 3e-41
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 169 7e-41
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 166 5e-40
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 165 9e-40
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 165 1e-39
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 165 1e-39
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 163 4e-39
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 163 6e-39
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 162 8e-39
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 162 8e-39
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 161 2e-38
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 161 2e-38
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 161 2e-38
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 161 3e-38
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 160 3e-38
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 160 4e-38
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 159 6e-38
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 159 6e-38
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 159 8e-38
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 159 8e-38
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 159 1e-37
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 158 1e-37
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 158 1e-37
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 158 2e-37
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 158 2e-37
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 157 2e-37
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 157 2e-37
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 157 4e-37
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 157 4e-37
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 156 5e-37
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 156 7e-37
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 156 7e-37
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 156 7e-37
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 155 9e-37
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 155 9e-37
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 155 9e-37
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 155 9e-37
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 155 9e-37
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 155 9e-37
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 155 9e-37
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 155 1e-36
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 155 1e-36
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 155 1e-36
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 155 2e-36
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 155 2e-36
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 154 2e-36
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 154 3e-36
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 154 3e-36
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 153 4e-36
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 153 4e-36
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 153 5e-36
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 153 7e-36
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 153 7e-36
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 153 7e-36
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 152 9e-36
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 152 9e-36
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 152 1e-35
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 152 1e-35
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 152 1e-35
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 151 2e-35
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 151 2e-35
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 151 2e-35
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 151 2e-35
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 151 2e-35
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 151 2e-35
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 151 2e-35
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 151 2e-35
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 151 2e-35
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 151 2e-35
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 151 3e-35
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 151 3e-35
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 151 3e-35
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 150 5e-35
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 150 5e-35
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 150 5e-35
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 150 5e-35
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 150 5e-35
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 150 5e-35
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 150 5e-35
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 149 6e-35
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 149 8e-35
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 149 8e-35
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 149 8e-35
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 149 8e-35
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 149 8e-35
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 149 1e-34
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 148 1e-34
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 148 1e-34
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 148 1e-34
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 148 1e-34
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 148 1e-34
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 148 2e-34
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 148 2e-34
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 148 2e-34
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 148 2e-34
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 148 2e-34
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 148 2e-34
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 147 3e-34
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 147 3e-34
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 147 3e-34
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 147 3e-34
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 147 3e-34
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 146 4e-34
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 146 6e-34
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 146 6e-34
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 146 6e-34
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 146 6e-34
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 146 8e-34
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 146 8e-34
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 145 1e-33
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 145 1e-33
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 145 1e-33
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 144 2e-33
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 144 2e-33
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 144 2e-33
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 144 2e-33
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 144 2e-33
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 144 2e-33
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 144 2e-33
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 144 2e-33
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 144 2e-33
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 144 3e-33
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 144 3e-33
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 144 3e-33
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 143 4e-33
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 143 4e-33
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 143 4e-33
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 143 4e-33
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 143 4e-33
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 143 5e-33
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 143 5e-33
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 143 5e-33
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 142 7e-33
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 142 7e-33
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 142 7e-33
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 142 9e-33
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 142 9e-33
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 142 1e-32
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 142 1e-32
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 142 1e-32
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 141 2e-32
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 141 2e-32
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 141 2e-32
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 141 2e-32
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 141 2e-32
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 140 3e-32
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 140 4e-32
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 140 4e-32
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 140 4e-32
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 140 4e-32
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 140 4e-32
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 140 4e-32
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 140 4e-32
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 140 5e-32
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 140 5e-32
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 140 5e-32
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 140 5e-32
UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n... 140 5e-32
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 140 5e-32
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 140 5e-32
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 139 7e-32
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 139 7e-32
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 139 7e-32
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 139 7e-32
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 139 9e-32
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 139 9e-32
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 139 9e-32
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 138 1e-31
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 138 1e-31
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 138 2e-31
UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lambl... 138 2e-31
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 138 2e-31
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 138 2e-31
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 138 2e-31
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 138 2e-31
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 138 2e-31
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 138 2e-31
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 138 2e-31
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 138 2e-31
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 137 3e-31
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 137 3e-31
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 137 3e-31
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 137 3e-31
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 137 4e-31
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 137 4e-31
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 137 4e-31
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 137 4e-31
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 137 4e-31
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 137 4e-31
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 137 4e-31
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 137 4e-31
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 136 5e-31
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 136 5e-31
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 136 5e-31
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 136 5e-31
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 136 5e-31
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 136 5e-31
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 136 6e-31
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 136 6e-31
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 136 6e-31
UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA... 136 6e-31
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 136 6e-31
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 136 6e-31
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 136 8e-31
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 136 8e-31
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 136 8e-31
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 136 8e-31
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 136 8e-31
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 136 8e-31
UniRef50_A7U5X2 Cluster: DEAD-box helicase 15; n=2; Plasmodium f... 136 8e-31
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 136 8e-31
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 136 8e-31
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 135 1e-30
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 135 1e-30
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 135 1e-30
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 135 1e-30
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 135 1e-30
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 135 1e-30
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 135 1e-30
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 135 1e-30
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 135 1e-30
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 135 1e-30
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 135 1e-30
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 135 1e-30
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 134 2e-30
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 134 2e-30
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 134 2e-30
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 134 2e-30
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 134 2e-30
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 134 2e-30
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 134 2e-30
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 134 2e-30
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 134 3e-30
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 134 3e-30
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 134 3e-30
UniRef50_A5K917 Cluster: DEAD/DEAH box helicase, putative; n=4; ... 134 3e-30
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 134 3e-30
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 134 3e-30
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 134 3e-30
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 133 4e-30
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 133 4e-30
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 133 4e-30
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 133 6e-30
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 133 6e-30
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 133 6e-30
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 132 8e-30
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 132 8e-30
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 132 8e-30
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 132 8e-30
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 132 8e-30
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 132 8e-30
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 132 8e-30
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 132 8e-30
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 132 1e-29
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 132 1e-29
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 132 1e-29
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 132 1e-29
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 132 1e-29
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 132 1e-29
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 132 1e-29
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 132 1e-29
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 132 1e-29
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 132 1e-29
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 132 1e-29
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 132 1e-29
UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2... 132 1e-29
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 131 2e-29
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 131 2e-29
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 131 2e-29
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 131 2e-29
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 131 2e-29
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 131 2e-29
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 131 2e-29
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 131 2e-29
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 131 2e-29
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 131 2e-29
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 131 2e-29
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 131 2e-29
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 130 3e-29
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 130 3e-29
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 130 3e-29
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 130 3e-29
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 130 4e-29
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 130 4e-29
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 130 4e-29
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 130 4e-29
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 130 4e-29
UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 130 4e-29
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 130 5e-29
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 130 5e-29
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 130 5e-29
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 130 5e-29
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 130 5e-29
UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole geno... 130 5e-29
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 129 7e-29
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 129 7e-29
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 129 9e-29
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 129 9e-29
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 129 9e-29
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 129 9e-29
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 129 9e-29
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 128 1e-28
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 128 1e-28
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 128 1e-28
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 128 1e-28
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 128 1e-28
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 128 1e-28
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 128 1e-28
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 128 1e-28
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 128 1e-28
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 128 2e-28
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 128 2e-28
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 128 2e-28
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 128 2e-28
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 128 2e-28
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 128 2e-28
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 128 2e-28
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 128 2e-28
UniRef50_Q9FLB0 Cluster: DEAD-box ATP-dependent RNA helicase 18;... 128 2e-28
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 128 2e-28
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 128 2e-28
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 128 2e-28
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 128 2e-28
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 128 2e-28
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 128 2e-28
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 128 2e-28
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 128 2e-28
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 128 2e-28
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 128 2e-28
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 128 2e-28
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 127 3e-28
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 127 3e-28
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 127 3e-28
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 127 3e-28
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 127 3e-28
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 127 3e-28
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 127 3e-28
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 127 3e-28
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 127 4e-28
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 127 4e-28
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 127 4e-28
UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX... 127 4e-28
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 127 4e-28
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 127 4e-28
UniRef50_UPI000023DE12 Cluster: hypothetical protein FG05108.1; ... 126 5e-28
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 126 5e-28
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 126 5e-28
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 126 5e-28
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 126 5e-28
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 126 5e-28
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 126 7e-28
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 126 7e-28
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 126 7e-28
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 126 7e-28
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 126 7e-28
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 126 7e-28
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 126 7e-28
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 126 7e-28
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 126 7e-28
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 126 9e-28
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 126 9e-28
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 126 9e-28
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 126 9e-28
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 126 9e-28
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 126 9e-28
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 126 9e-28
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 126 9e-28
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 126 9e-28
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 125 1e-27
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 125 1e-27
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 125 1e-27
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 125 1e-27
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 125 1e-27
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 125 1e-27
UniRef50_Q9FVV4 Cluster: Putative DEAD-box ATP-dependent RNA hel... 125 1e-27
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 125 1e-27
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 125 1e-27
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 125 2e-27
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 125 2e-27
UniRef50_Q4QFH1 Cluster: ATP-dependent RNA helicase, putative; n... 125 2e-27
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 125 2e-27
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 125 2e-27
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 125 2e-27
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 125 2e-27
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 124 2e-27
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 124 2e-27
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 124 2e-27
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 124 2e-27
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 124 2e-27
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 124 2e-27
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 124 2e-27
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 124 3e-27
UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;... 124 3e-27
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 124 3e-27
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 124 3e-27
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 124 3e-27
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 124 3e-27
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 124 3e-27
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 124 4e-27
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 124 4e-27
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 124 4e-27
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 124 4e-27
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 124 4e-27
UniRef50_UPI0000ECBDA5 Cluster: ATP-dependent RNA helicase DDX24... 123 5e-27
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 123 5e-27
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 123 5e-27
UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole gen... 123 5e-27
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 123 5e-27
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 123 5e-27
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 123 5e-27
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 123 6e-27
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 123 6e-27
UniRef50_Q6CDS6 Cluster: ATP-dependent RNA helicase ROK1; n=1; Y... 123 6e-27
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 123 6e-27
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 123 6e-27
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 123 6e-27
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 123 6e-27
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 123 6e-27
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 122 8e-27
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 122 8e-27
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 122 1e-26
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 122 1e-26
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 122 1e-26
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 122 1e-26
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 122 1e-26
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 122 1e-26
UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein; ... 121 2e-26
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 121 2e-26
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 121 2e-26
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 121 2e-26
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 121 2e-26
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 121 2e-26
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 121 2e-26
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 121 2e-26
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 120 3e-26
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 120 4e-26
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 120 4e-26
UniRef50_Q4N4Z2 Cluster: ATP-dependent RNA helicase, putative; n... 120 4e-26
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 120 4e-26
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 120 4e-26
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 120 4e-26
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 120 4e-26
UniRef50_A6R918 Cluster: Putative uncharacterized protein; n=1; ... 73 5e-26
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 120 6e-26
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 120 6e-26
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 120 6e-26
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 119 8e-26
UniRef50_Q03AA2 Cluster: Superfamily II DNA and RNA helicase; n=... 119 8e-26
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 119 8e-26
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 119 8e-26
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 119 8e-26
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 119 8e-26
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 119 8e-26
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 119 8e-26
UniRef50_A5DUB2 Cluster: ATP-dependent RNA helicase MAK5; n=5; S... 119 8e-26
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 119 1e-25
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 119 1e-25
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 119 1e-25
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 119 1e-25
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 119 1e-25
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 297 bits (729), Expect = 2e-79
Identities = 144/205 (70%), Positives = 173/205 (84%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
SG FQSM LSFP+LKGI KRGYK PTPIQRKTIP+AL G+D+VAMARTGSGKTACF++P+
Sbjct: 35 SGGFQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPL 94
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
EKL + K RALILSPTRELALQTL+F++ELG+FTGL + ILGG+++E QF
Sbjct: 95 FEKLKIRQAKV----GARALILSPTRELALQTLKFIKELGRFTGLKATIILGGDNMENQF 150
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
+ + G+ PDI++ATPGRFLHICIEM L+L+NI+ VVFDEADRLFE+GFGEQ+ EI RLP
Sbjct: 151 SAIHGN-PDILIATPGRFLHICIEMDLQLNNIEYVVFDEADRLFEMGFGEQINEIINRLP 209
Query: 735 SSRQTLLFSATLPKMLVXFARAGLS 809
SRQTLLFSATLPK+LV FA+ GL+
Sbjct: 210 ESRQTLLFSATLPKLLVDFAKIGLN 234
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 289 bits (709), Expect = 6e-77
Identities = 144/240 (60%), Positives = 180/240 (75%), Gaps = 4/240 (1%)
Frame = +3
Query: 102 KELDDHLPGFDAPKADXXXXXXXXXXXXXXS----SGAFQSMGLSFPVLKGITKRGYKQP 269
K+ D +PGF + D S SG FQSMGL F ++KGITKRGYK P
Sbjct: 3 KKQADEIPGFPSLDNDAGTSDRGADILKSKSKKNKSGGFQSMGLGFELIKGITKRGYKVP 62
Query: 270 TPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPT 449
TPIQRKTIP+ L G+DVVAMA+TGSGKTACF++P+ EKL + P K RALILSPT
Sbjct: 63 TPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEKL----QRREPTKGARALILSPT 118
Query: 450 RELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHICIEM 629
RELA+QT +F++ELG+F L S +LGG+S++ QF+ + + PD++VATPGRFLH+C+EM
Sbjct: 119 RELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIH-TCPDVIVATPGRFLHLCVEM 177
Query: 630 CLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFSATLPKMLVXFARAGLS 809
LKL++I+ VVFDEADRLFE+GFGEQL E RLPSSRQT++FSATLPK+LV FARAGL+
Sbjct: 178 DLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMFSATLPKLLVEFARAGLN 237
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 287 bits (705), Expect = 2e-76
Identities = 142/204 (69%), Positives = 168/204 (82%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
SG FQSMGLS V++GI KRGYK PTPIQRKTIPIAL G+DVVAMARTGSGKTACF++P+
Sbjct: 37 SGGFQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPM 96
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
EKL K RALILSPTRELALQT RF++E+G+FTGL S+ ILGG+S++ QF
Sbjct: 97 FEKLKTRQAKT----GARALILSPTRELALQTQRFIKEIGRFTGLKSSVILGGDSMDNQF 152
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
+ + G+ PDI+VATPGRFLHICIEM + L +I+ V+FDEADRLFE+GFGEQ+ EI RLP
Sbjct: 153 SAIHGN-PDIIVATPGRFLHICIEMDMNLKSIEFVIFDEADRLFEMGFGEQIHEIANRLP 211
Query: 735 SSRQTLLFSATLPKMLVXFARAGL 806
+RQTLLFSATLPK+LV FA AGL
Sbjct: 212 KNRQTLLFSATLPKVLVEFATAGL 235
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 285 bits (698), Expect = 1e-75
Identities = 139/205 (67%), Positives = 166/205 (80%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
SG FQSMGLS+PV KGI K+GYK PTPIQRKTIP+ L GKDVVAMARTGSGKTACF+LP+
Sbjct: 95 SGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPM 154
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
E+L + + RALILSPTRELALQTL+F +ELGKFTGL +A ILGG+ +E QF
Sbjct: 155 FERLKTHSAQT----GARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMEDQF 210
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
+ +PDI++ATPGR +H+ +EM LKL +++ VVFDEADRLFE+GF EQLQEI ARLP
Sbjct: 211 AALH-ENPDIIIATPGRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQEIIARLP 269
Query: 735 SSRQTLLFSATLPKMLVXFARAGLS 809
QT+LFSATLPK+LV FARAGL+
Sbjct: 270 GGHQTVLFSATLPKLLVEFARAGLT 294
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 276 bits (676), Expect = 6e-73
Identities = 134/205 (65%), Positives = 163/205 (79%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
SG FQSMGLSFPV KG+ ++GYK PTPIQRKTIP+ L GKDVVAMARTGSGKTA F++P+
Sbjct: 36 SGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLIPM 95
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
E+L P + RALILSPTRELALQT++F +ELGKFT L +A ILGG+S++ QF
Sbjct: 96 FERLKAPQAQT----GARALILSPTRELALQTMKFTKELGKFTKLKTALILGGDSMDDQF 151
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
+ +PDI++ TPGR +H+ EM LKL N++ VVFDEADRLFE+GF EQLQEI R P
Sbjct: 152 AALH-ENPDIIIGTPGRLMHVIKEMNLKLQNVEYVVFDEADRLFEMGFAEQLQEIIRRFP 210
Query: 735 SSRQTLLFSATLPKMLVXFARAGLS 809
+RQTLLFSATLPK++V FARAGL+
Sbjct: 211 ETRQTLLFSATLPKVIVEFARAGLT 235
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 266 bits (652), Expect = 4e-70
Identities = 132/233 (56%), Positives = 166/233 (71%), Gaps = 3/233 (1%)
Frame = +3
Query: 120 LPGFDAPKADXXXXXXXXXXXXXXSS---GAFQSMGLSFPVLKGITKRGYKQPTPIQRKT 290
LPGF AD G FQ+MGLS P+LK I K GYK PTPIQRKT
Sbjct: 9 LPGFSIENADLDFDDDDDVSGKKGKKKKGGGFQAMGLSMPILKAILKMGYKVPTPIQRKT 68
Query: 291 IPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQT 470
IP+ L G+DVVAMA+TGSGKT CF++P+ EKL K RAL+L+PTRELA+QT
Sbjct: 69 IPLILEGRDVVAMAKTGSGKTGCFLIPLFEKLKQREIK----SGARALVLTPTRELAIQT 124
Query: 471 LRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNI 650
+F+++LGKFT L + +LGG+S++ QF + + PDI+VATPGRFLH+C+EM LKL ++
Sbjct: 125 FKFIKQLGKFTDLKTILVLGGDSMDSQFAAIH-TLPDIIVATPGRFLHLCVEMDLKLSSV 183
Query: 651 KIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFSATLPKMLVXFARAGLS 809
+ VFDEADRLFE+GFGEQL E RLP +RQ +LFSATLPK++V FA+AGLS
Sbjct: 184 QYCVFDEADRLFEMGFGEQLTETLRRLPEARQMVLFSATLPKLMVDFAKAGLS 236
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 257 bits (630), Expect = 2e-67
Identities = 130/205 (63%), Positives = 162/205 (79%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
SSG+F +GLS VLK I ++G+KQPTPIQRKTIP+ L GKDVV MARTGSGKTA FVLP
Sbjct: 100 SSGSFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLP 159
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 551
+LEKL V + K RA+ILSP+RELALQTL+ V++ T L A ++GG+S+E+Q
Sbjct: 160 MLEKLKVHSAKV----GARAVILSPSRELALQTLKVVKDFSAGTDLRLAMLVGGDSLEEQ 215
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
F +M S+PDI++ATPGRFLH+ +EM L L +++ + FDEADRLFELGFGEQ+ E+ A L
Sbjct: 216 FKMMM-SNPDIIIATPGRFLHLKVEMELSLASVEYICFDEADRLFELGFGEQMNELLASL 274
Query: 732 PSSRQTLLFSATLPKMLVXFARAGL 806
PS+RQTLLFSATLPK LV FA+AGL
Sbjct: 275 PSNRQTLLFSATLPKTLVEFAKAGL 299
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 252 bits (617), Expect = 8e-66
Identities = 124/205 (60%), Positives = 160/205 (78%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
+G +Q +GL V K I K+G+ QPTPIQRKTIP + GKDVVAM+RTGSGKTA FV+P+
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPM 82
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
L+KL + T G +RAL++SPTRELALQT + V+ELG+FTGL A ++GG+ IE+QF
Sbjct: 83 LQKL---KRRDTTG--IRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQF 137
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
+ + +PDI++ATPGR LH+ +EM L+L ++ VVFDEADRLFE+GF +QL E R+P
Sbjct: 138 STIH-ENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIP 196
Query: 735 SSRQTLLFSATLPKMLVXFARAGLS 809
SRQTLLFSATLPKMLV FA+AGL+
Sbjct: 197 ESRQTLLFSATLPKMLVDFAKAGLT 221
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 252 bits (616), Expect = 1e-65
Identities = 128/203 (63%), Positives = 158/203 (77%)
Frame = +3
Query: 198 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 377
G FQ+MGL+ +LK I ++G+ PTPIQRKTIP+ + +DVV MARTGSGKTA FV+P++
Sbjct: 91 GGFQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMI 150
Query: 378 EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
EKL + K R LILSP+RELALQTL+ V+ELGK T L S ++GG+S+E+QF
Sbjct: 151 EKLKSHSTK----FGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEEQFG 206
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+M+G+ PDIV+ATPGRFLH+ +EM L L +IK VVFDEADRLFE+GF QL EI LPS
Sbjct: 207 MMAGN-PDIVIATPGRFLHLKVEMNLDLSSIKYVVFDEADRLFEMGFAAQLTEILHGLPS 265
Query: 738 SRQTLLFSATLPKMLVXFARAGL 806
+RQTLLFSATLPK LV FARAGL
Sbjct: 266 TRQTLLFSATLPKSLVEFARAGL 288
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 249 bits (610), Expect = 6e-65
Identities = 127/201 (63%), Positives = 156/201 (77%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
FQSMGL+ +L+ I K+G+K PTPIQRKTIP+ L G+DVV MARTGSGKTA FV+P++E
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L N RALILSP RELALQT++ V++ K T L S AI+GG S+E+QF+++
Sbjct: 131 L----KSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLL 186
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
SG PDIVVATPGRFLH+ +EM L+L +I+ VVFDEADRLFE+GF QL EI LP+SR
Sbjct: 187 SGK-PDIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSR 245
Query: 744 QTLLFSATLPKMLVXFARAGL 806
QTLLFSATLP+ LV FA+AGL
Sbjct: 246 QTLLFSATLPRTLVDFAKAGL 266
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 245 bits (599), Expect = 1e-63
Identities = 120/204 (58%), Positives = 159/204 (77%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
SG FQ+MGL+ +L+ I+++G+ PTPIQRKTIP+ L +DVV MARTGSGKTA FV+P+
Sbjct: 85 SGGFQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPM 144
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
+E+L + + RA+I+SP+RELALQTL+ V+ELGK T L + ++GG+S+E+QF
Sbjct: 145 IERLKAHSARV----GARAIIMSPSRELALQTLKVVKELGKGTDLKTVLLVGGDSLEEQF 200
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
+M+ ++PDI++ATPGRFLH+ +EM L L +++ VVFDEADRLFE+GF QL EI LP
Sbjct: 201 GLMA-ANPDIIIATPGRFLHLKVEMSLNLSSVRYVVFDEADRLFEMGFAAQLTEILHALP 259
Query: 735 SSRQTLLFSATLPKMLVXFARAGL 806
SRQTLLFSATLP LV FARAGL
Sbjct: 260 PSRQTLLFSATLPSSLVEFARAGL 283
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 243 bits (595), Expect = 4e-63
Identities = 119/203 (58%), Positives = 157/203 (77%)
Frame = +3
Query: 198 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 377
G FQ+MGL+ +LK I ++G+K PTPIQRK +P+ L G DVV MARTGSGKTA FV+P++
Sbjct: 78 GGFQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMI 137
Query: 378 EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
E+L + K R +I+SP+RELALQTL+ V+E G+ T L + ++GG+S+E+QFN
Sbjct: 138 ERLKTHSAKV----GARGVIMSPSRELALQTLKVVKEFGRGTDLRTILLVGGDSLEEQFN 193
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
M+ ++PDI++ATPGRFLH+ +EM L L +++ +VFDEADRLFE+GF QL EI LP+
Sbjct: 194 SMT-TNPDIIIATPGRFLHLKVEMGLDLSSVQYIVFDEADRLFEMGFAAQLAEILYALPT 252
Query: 738 SRQTLLFSATLPKMLVXFARAGL 806
SRQTLLFSATLPK LV FARAGL
Sbjct: 253 SRQTLLFSATLPKSLVEFARAGL 275
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 243 bits (594), Expect = 5e-63
Identities = 122/204 (59%), Positives = 157/204 (76%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
SG FQ+MGL+ +L+ IT++G+ PTPIQRK+IP+ L +DVV MARTGSGKTA FV+P+
Sbjct: 89 SGGFQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAFVIPM 148
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
+E+L + + RALI+SP+RELALQTL+ V+E GK T L + ++GG+S+E QF
Sbjct: 149 IERLRAHSARV----GARALIMSPSRELALQTLKVVKEFGKGTDLKTVLLVGGDSLEDQF 204
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
M+ ++PDI++ATPGRFLH+ +EM L L +IK VVFDEADRLFE+GF QL EI LP
Sbjct: 205 GFMT-TNPDIIIATPGRFLHLKVEMSLDLSSIKYVVFDEADRLFEMGFATQLTEILHSLP 263
Query: 735 SSRQTLLFSATLPKMLVXFARAGL 806
SRQTLLFSATLP+ LV FARAGL
Sbjct: 264 PSRQTLLFSATLPRSLVEFARAGL 287
>UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Saccharomyces cerevisiae (Baker's yeast)
Length = 995
Score = 233 bits (569), Expect = 5e-60
Identities = 116/204 (56%), Positives = 153/204 (75%), Gaps = 1/204 (0%)
Frame = +3
Query: 198 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 377
G+F S GLS VL I ++G++QPTPIQRKTIP+ L +D+V MARTGSGKTA F+LP++
Sbjct: 137 GSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMV 196
Query: 378 EKLLVPNNKPTPGK-NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
EKL K GK RA+ILSP+RELA+QT ++ + T L S + GG+S+E+QF
Sbjct: 197 EKL-----KSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSLEEQF 251
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
+M ++PD+++ATPGRFLH+ +EM L L +++ VVFDEADRLFE+GF EQL E+ A LP
Sbjct: 252 GMMM-TNPDVIIATPGRFLHLKVEMNLDLKSVEYVVFDEADRLFEMGFQEQLNELLASLP 310
Query: 735 SSRQTLLFSATLPKMLVXFARAGL 806
++RQTLLFSATLP LV F +AGL
Sbjct: 311 TTRQTLLFSATLPNSLVDFVKAGL 334
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 225 bits (550), Expect = 1e-57
Identities = 114/205 (55%), Positives = 149/205 (72%), Gaps = 1/205 (0%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
SG F+S+ L V I K+GYK PTPIQRKT+P+ L+G DVVAMARTGSGKTA F++P+
Sbjct: 27 SGGFESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPM 86
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
LEKL + P +RALILSPTR+LA QTL+F +ELGKFT L + ++GG+S+E QF
Sbjct: 87 LEKL----KQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQF 142
Query: 555 NVMSGSSPDIVVATPGRFLHICIEM-CLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
++ PD+++ATPGR +H+ E+ + L ++ VVFDEAD LF +GF EQL +I +L
Sbjct: 143 EELT-KGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQL 201
Query: 732 PSSRQTLLFSATLPKMLVXFARAGL 806
+RQTLLFSATLP L FA+AGL
Sbjct: 202 SENRQTLLFSATLPSALAEFAKAGL 226
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 222 bits (542), Expect = 1e-56
Identities = 110/205 (53%), Positives = 152/205 (74%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
+G FQSM L+ +LK I K+G+ PTPIQRK+IP+ L G D+V MARTGSGKT FV+P+
Sbjct: 229 TGGFQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPM 288
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
++KL ++ T G +RA+ILSPTRELA+QT + V++ + T L + I+GG+S+E QF
Sbjct: 289 IQKL--GDHSTTVG--VRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQF 344
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
++ +PDI++ATPGR +H +E + L ++ +VFDEADRLFE+GF EQL EI ++L
Sbjct: 345 TDLA-RNPDIIIATPGRLMHHLLETGMSLSKVQYIVFDEADRLFEMGFNEQLTEILSKLS 403
Query: 735 SSRQTLLFSATLPKMLVXFARAGLS 809
+RQTLLFSATLP +LV F RAGL+
Sbjct: 404 ENRQTLLFSATLPSLLVDFVRAGLN 428
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 217 bits (531), Expect = 2e-55
Identities = 109/205 (53%), Positives = 148/205 (72%), Gaps = 1/205 (0%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
SG F+SMGL V +G+ +GY+ PTPIQRK +P+ L G D+ AMARTGSGKTA F++P+
Sbjct: 48 SGGFESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPM 107
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
+++L + G +RALILSPTR+LA QTL+F ++LGKFT L + I+GG+S+E QF
Sbjct: 108 IQRL----RRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQF 163
Query: 555 NVMSGSSPDIVVATPGRFLHICIEM-CLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
++ +PDI++ATPGR +H E+ L L ++ VVFDEAD LF LG +QL +I +L
Sbjct: 164 EELA-ENPDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHDILHKL 222
Query: 732 PSSRQTLLFSATLPKMLVXFARAGL 806
+RQTLLFSATLP+ L FA+AGL
Sbjct: 223 SDTRQTLLFSATLPQALADFAKAGL 247
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 214 bits (522), Expect = 3e-54
Identities = 106/170 (62%), Positives = 130/170 (76%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
SG FQSMGLS+PV KG+ K+GYK PTPIQRKTIP+ L GKDVVAMARTGSGKTACF++P+
Sbjct: 149 SGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLIPM 208
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
EKL + + RAL+LSPTRELALQT +F +ELGKFTGL A ILGG+ +E QF
Sbjct: 209 FEKLKAHSAQ----AGARALVLSPTRELALQTGKFTKELGKFTGLKMALILGGDRMEDQF 264
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGE 704
+ +PDI++ATPGR +H+ +EM LKL +++ VVFDEADR G GE
Sbjct: 265 AALH-ENPDIIIATPGRLMHVAVEMNLKLQSVEYVVFDEADRCAG-GLGE 312
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 206 bits (503), Expect = 5e-52
Identities = 105/202 (51%), Positives = 139/202 (68%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
SSG FQSMGL+ L G+ K+GY+ PTPIQRK IP L G D++AMARTGSGKTA +++P
Sbjct: 11 SSGGFQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVP 70
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 551
I+ +L T G +R+LI+ PTRELALQT++ ELGK T L ++ I+GG + Q
Sbjct: 71 IINRL---ETHSTEG--VRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKLSDQ 125
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
F+ +S S PDI+VATPGR I + L+ +++V FDEAD +FE GF EQ+ +I L
Sbjct: 126 FDNLS-SGPDIIVATPGRLTFILEGANISLNRVEMVCFDEADLMFESGFSEQVSDIMRML 184
Query: 732 PSSRQTLLFSATLPKMLVXFAR 797
P +RQ LLFSATLP+ L F +
Sbjct: 185 PPTRQILLFSATLPRNLAEFLK 206
>UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP10 -
Ustilago maydis (Smut fungus)
Length = 1154
Score = 205 bits (501), Expect = 9e-52
Identities = 108/218 (49%), Positives = 153/218 (70%), Gaps = 15/218 (6%)
Frame = +3
Query: 198 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTG--KDVVAMARTGSGKTACFVLP 371
G+FQSMGL +L+ + RG+ PTPIQR+ IP ++ +DVV MARTGSGKT +++P
Sbjct: 144 GSFQSMGLHPSLLRSLLIRGFTTPTPIQRQAIPAIMSQPPRDVVGMARTGSGKTLAYLIP 203
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-------------TGLT 512
++ +L N + +P +++LIL P+RELA+Q LR +E+ + +
Sbjct: 204 LINRL---NGRHSPTFGIKSLILCPSRELAVQILRVGKEIARGWKADAGEGQDSRGEAIR 260
Query: 513 SAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFEL 692
A I+GGES+++QF +MS ++PD+V+ATPGR LH+ +EM L L +++ VVFDEADRLFE+
Sbjct: 261 WAIIVGGESLDEQFGIMS-NNPDVVIATPGRMLHLTVEMNLDLKSVEYVVFDEADRLFEM 319
Query: 693 GFGEQLQEICARLPSSRQTLLFSATLPKMLVXFARAGL 806
GF EQL+E+ RLP +RQTLLFSATLPK LV F +AGL
Sbjct: 320 GFAEQLEEMLLRLPPTRQTLLFSATLPKKLVEFTKAGL 357
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 202 bits (493), Expect = 8e-51
Identities = 102/203 (50%), Positives = 138/203 (67%)
Frame = +3
Query: 198 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 377
G F+SM L +PV K I RG+ PTPIQRK IP+ L G+DVVA +RTGSGKTA F++P++
Sbjct: 299 GGFESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGKTAAFIIPLI 358
Query: 378 EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
KL N+ G RALI+ PTRELALQ ++ KFT LT I+GG +E QF
Sbjct: 359 NKL--QNHSRIVGA--RALIVVPTRELALQIASVLKTFIKFTDLTYTLIVGGHGLEGQFE 414
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
++ S+PDI++ATPGR + E L L+ ++ ++FDE D LFE+GF +Q++ I ++
Sbjct: 415 SLA-SNPDIIIATPGRLSQLIDETDLSLNKVEFLIFDECDYLFEMGFADQMKTILKKVSQ 473
Query: 738 SRQTLLFSATLPKMLVXFARAGL 806
RQTL+FSAT+P+ L FARAGL
Sbjct: 474 QRQTLMFSATIPEELSSFARAGL 496
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 201 bits (491), Expect = 1e-50
Identities = 109/203 (53%), Positives = 137/203 (67%)
Frame = +3
Query: 198 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 377
G FQS L P+L I K+G+ PTPIQRK IP L G DVVAMARTGSGKTA F++P+L
Sbjct: 22 GGFQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIPML 81
Query: 378 EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
L + G +R L+LSPTREL+LQ LR L KF L AA++GG+S++QQF
Sbjct: 82 NTLKA--HAKIVG--IRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQFE 137
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+++ S+PD+VVATPGR LHI E L L +++ +V DEADRLFELG Q+ I +LP
Sbjct: 138 LLA-SNPDVVVATPGRLLHIMEEASLHLTSVRCLVLDEADRLFELGLQPQIGAIMQKLPE 196
Query: 738 SRQTLLFSATLPKMLVXFARAGL 806
S Q LFSAT+P +L F AGL
Sbjct: 197 SCQRALFSATMPTVLAEFTSAGL 219
>UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 868
Score = 201 bits (490), Expect = 2e-50
Identities = 105/206 (50%), Positives = 139/206 (67%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
+ G FQS G S +L+ I GY PTPIQRK P L G+DVVAMARTGSGKTA FVLP
Sbjct: 2 AKGTFQSFGFSPKLLESIKIIGYSLPTPIQRKCFPSILAGRDVVAMARTGSGKTAGFVLP 61
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 551
++E+L +++ +R ++LSPTRELALQT R VR+L T L A+ GG S+++Q
Sbjct: 62 MIERLGCSHSQIV---GIRGVVLSPTRELALQTYRVVRKLACKTNLVVCALTGGSSLDRQ 118
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
F +SG+ PDIVVATPGR H IE L L +KI++ DEADRLFE+G Q+++I +
Sbjct: 119 FESLSGN-PDIVVATPGRLFHHIIEAGLSLIAVKIIILDEADRLFEMGLASQIEKILESI 177
Query: 732 PSSRQTLLFSATLPKMLVXFARAGLS 809
P +RQ +L SAT+P L F++ L+
Sbjct: 178 PKNRQCVLVSATMPTALASFSKVMLN 203
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 193 bits (470), Expect = 5e-48
Identities = 100/208 (48%), Positives = 136/208 (65%), Gaps = 2/208 (0%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
S+ +FQ+ LS P+L+G+T G+ PTPIQRKTIP+AL GKDVV A TGSGKT F++P
Sbjct: 303 SAKSFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIP 362
Query: 372 ILEKLLV-PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQ 548
ILE+LL P PT R IL PTRELA+Q +L FT +T ++GG S+ +
Sbjct: 363 ILERLLYRPRKVPTS----RVAILMPTRELAVQCYNVATKLATFTDITFCQLVGGFSLRE 418
Query: 549 QFNVMSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICA 725
Q N++ PD+++ATPGRF+ H+ +D ++I+V DEADR+ E GF ++L EI
Sbjct: 419 QENILK-KRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILT 477
Query: 726 RLPSSRQTLLFSATLPKMLVXFARAGLS 809
+P SRQT+LFSAT+ + R GLS
Sbjct: 478 TIPKSRQTMLFSATMTNNVDKLIRVGLS 505
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 190 bits (462), Expect = 5e-47
Identities = 96/204 (47%), Positives = 139/204 (68%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
SG F+SMGL + + I +G+ PTPIQRK IP L G+D+VA ++TGSGKTA F++P+
Sbjct: 9 SGGFESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPL 68
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
+ KL N+ G +R LIL PTRELALQ ++ L KF+ + + ++GG E QF
Sbjct: 69 INKL--QNHSTVVG--IRGLILLPTRELALQIASVLKALLKFSDIQYSIMVGGHGFEGQF 124
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
++ S+PDI++ TPGR L +E LKL +++V++DEAD LFE+G +QL++I + LP
Sbjct: 125 ESLA-SNPDILICTPGRVLQHLLEDRLKLSRVQMVIYDEADFLFEMGLADQLKQILSHLP 183
Query: 735 SSRQTLLFSATLPKMLVXFARAGL 806
S +Q+L+FSAT+P+ L FA GL
Sbjct: 184 SQKQSLMFSATIPEQLSMFASVGL 207
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 185 bits (451), Expect = 1e-45
Identities = 96/205 (46%), Positives = 132/205 (64%), Gaps = 2/205 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+FQ LS P+L+G+ + PTPIQ+KTIP+AL GKD+V A TGSGKTA FV+PILE
Sbjct: 791 SFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE 850
Query: 381 KLLV-PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
+LL P PT R IL PTRELA+Q +L +T +T ++GG S+ +Q N
Sbjct: 851 RLLFRPRKVPTS----RVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQEN 906
Query: 558 VMSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
V+ PD+++ATPGRF+ H+ +D ++I+V DEADR+ E GF ++L EI +P
Sbjct: 907 VLK-KRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIP 965
Query: 735 SSRQTLLFSATLPKMLVXFARAGLS 809
SRQT+LFSAT+ + R GL+
Sbjct: 966 KSRQTMLFSATMTDSVDKLIRVGLN 990
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 182 bits (444), Expect = 7e-45
Identities = 102/227 (44%), Positives = 142/227 (62%), Gaps = 2/227 (0%)
Frame = +3
Query: 96 KPKELDDHLPGFDAPKADXXXXXXXXXXXXXXSSGAFQSMGLSFPVLKGITKRGYKQPTP 275
K E+D+ +A KAD F S+ LS PVLKG+ GY +P+P
Sbjct: 198 KDDEIDEEDDSEEA-KADFYAPETEGDEAKKQMYENFNSLSLSRPVLKGLASLGYVKPSP 256
Query: 276 IQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRE 455
IQ TIPIAL GKD++A A TGSGKTA F++PI+E+LL KP + R ++L PTRE
Sbjct: 257 IQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY---KPAKIASTRVIVLLPTRE 313
Query: 456 LALQTLRFVRELGKF-TGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFL-HICIEM 629
LA+Q +++ +F +G+T +GG ++ QQ ++ S PDIV+ATPGRF+ HI
Sbjct: 314 LAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLK-SRPDIVIATPGRFIDHIRNSA 372
Query: 630 CLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFSATL 770
+D+++I+V DEADR+ E GF ++L EI LPS+RQ LLFSAT+
Sbjct: 373 SFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQNLLFSATM 419
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 182 bits (442), Expect = 1e-44
Identities = 101/205 (49%), Positives = 132/205 (64%), Gaps = 2/205 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+FQ M LS P+L+G+T G+ +PTPIQ KTIPI+L GKDVV A TGSGKTA FV+PILE
Sbjct: 294 SFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILE 353
Query: 381 KLLV-PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
+LL P PT R +IL+PTRELA+Q +L T + +GG S++ Q
Sbjct: 354 RLLYRPKKVPT----TRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQ-E 408
Query: 558 VMSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
PD+V+ATPGRF+ H+ +D I+I+V DEADR+ E GF ++L EI LP
Sbjct: 409 AELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADELNEILTTLP 468
Query: 735 SSRQTLLFSATLPKMLVXFARAGLS 809
SRQT+LFSAT+ + RAGL+
Sbjct: 469 KSRQTMLFSATMTSSVDRLIRAGLN 493
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 181 bits (441), Expect = 2e-44
Identities = 94/202 (46%), Positives = 137/202 (67%), Gaps = 1/202 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ + LS P+LK + K G+ QPTPIQ K IP+AL GKD++A A TGSGKTA F+LP+LE+
Sbjct: 192 FEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLER 251
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
LL +++ + +R LIL PTRELALQ + L +F+ +TS I+GG S + Q V
Sbjct: 252 LLFRDSEY---RAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQ-EVE 307
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
SPD+V+ATPGR + H+ + LD+++I++ DEADRL ++GF +++ +I P++
Sbjct: 308 LRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCPTN 367
Query: 741 RQTLLFSATLPKMLVXFARAGL 806
RQT+LFSATL + A+ L
Sbjct: 368 RQTMLFSATLNDEVKTLAKLSL 389
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 180 bits (439), Expect = 3e-44
Identities = 98/205 (47%), Positives = 132/205 (64%), Gaps = 2/205 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+FQ M LS P+L+G+T G+ +PTPIQ KTIPIAL GKDVV A TGSGKTA FV+PILE
Sbjct: 277 SFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPILE 336
Query: 381 KLLV-PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
+LL P PT R ++L+PTRELA+Q +L T + +GG S++ Q
Sbjct: 337 RLLYRPKKVPT----TRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKVQEG 392
Query: 558 VMSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
+ PD+V+ATPGRF+ H+ ++ ++I+V DEADR+ E GF ++L EI LP
Sbjct: 393 ELR-LRPDVVIATPGRFIDHMRNSASFAVETVEILVLDEADRMLEDGFADELNEILTTLP 451
Query: 735 SSRQTLLFSATLPKMLVXFARAGLS 809
SRQT+LFSAT+ + R GL+
Sbjct: 452 KSRQTMLFSATMTSTVDKLIRVGLN 476
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 178 bits (434), Expect = 1e-43
Identities = 98/205 (47%), Positives = 131/205 (63%), Gaps = 2/205 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+FQSM LS P+LKG++ G++ PT IQ KTIP+AL GKD+V A TGSGKTA F++PILE
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 381 KLLV-PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
+LL P PT R LIL PTRELA+Q ++ FT + +GG S++ Q
Sbjct: 320 RLLYRPKKVPT----TRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQ 375
Query: 558 VMSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
+ PDIV+ATPGRF+ H+ ++NI+I+V DEADR+ E GF ++L EI P
Sbjct: 376 ELR-KRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACP 434
Query: 735 SSRQTLLFSATLPKMLVXFARAGLS 809
SRQT+LFSAT+ + R L+
Sbjct: 435 KSRQTMLFSATMTDKVDDLIRLSLN 459
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 175 bits (427), Expect = 8e-43
Identities = 86/190 (45%), Positives = 123/190 (64%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +GL+ P+LK +T +GY PTPIQ + IP+ ++G+D++ +A+TG+GKTA F LPIL +
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L + KP P + R L+LSPTRELA Q R+ GK GLT A I GG Q +
Sbjct: 127 -LAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVKYGPQMKAL 185
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+ + D+VVATPGR + E L+ ++I V DEAD++ +LGF +++I ++LP R
Sbjct: 186 A-AGVDVVVATPGRLMDHLGEKSAHLNGVEIFVLDEADQMLDLGFVVPIRKIASQLPKER 244
Query: 744 QTLLFSATLP 773
Q L FSAT+P
Sbjct: 245 QNLFFSATMP 254
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 175 bits (427), Expect = 8e-43
Identities = 90/189 (47%), Positives = 126/189 (66%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F S+GLS P+ K +T++GY P+PIQ + IP LTGKDV+A A+TG+GKTA F LP+LE
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
LL NK G+ +RAL+L+PTRELA Q V GK+ L SA + GG I Q
Sbjct: 62 -LLSKGNKAKAGQ-IRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQK 119
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ D++VATPGR L + + +K + ++I+V DEADR+ ++GF +++I A LP+
Sbjct: 120 LR-HGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAK 178
Query: 741 RQTLLFSAT 767
RQ L+FSAT
Sbjct: 179 RQNLMFSAT 187
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 174 bits (424), Expect = 2e-42
Identities = 89/189 (47%), Positives = 126/189 (66%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F S+GLS P+ K +T++GY P+PIQ + IP LTGKDV+A A+TG+GKTA F LP+LE
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
LL NK G+ +RAL+L+PTRELA Q V GK+ L SA + GG I Q
Sbjct: 62 -LLSKGNKAKAGQ-IRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQK 119
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ D++VATPGR L + + +K + ++++V DEADR+ ++GF +++I A LP+
Sbjct: 120 LR-HGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAK 178
Query: 741 RQTLLFSAT 767
RQ L+FSAT
Sbjct: 179 RQNLMFSAT 187
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 173 bits (421), Expect = 4e-42
Identities = 91/199 (45%), Positives = 130/199 (65%), Gaps = 1/199 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+FQ GL+ P+ + +++ Y PTPIQ +TIP ALTG+DVV +A+TG+GKTA F LPIL
Sbjct: 17 SFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTASFALPILH 76
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF-N 557
+LL KP P K R L+LSPTREL+ Q L G+ L+S +GG + +Q +
Sbjct: 77 RLLEHRIKPQP-KTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPMGRQVRS 135
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+M G +++VATPGR L + LKL +++ +V DEADR+ ++GF +++I A+LP
Sbjct: 136 LMQG--VEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGFINDIRKIVAKLPI 193
Query: 738 SRQTLLFSATLPKMLVXFA 794
RQTL FSAT+PK + A
Sbjct: 194 KRQTLFFSATMPKDIAELA 212
>UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP10 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 802
Score = 172 bits (418), Expect = 1e-41
Identities = 100/228 (43%), Positives = 143/228 (62%), Gaps = 25/228 (10%)
Frame = +3
Query: 198 GAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTG--KDVVAMARTGSGKTACFVLP 371
G ++++ + +++ + R +K PTPIQR IP AL+ +D++ MARTGSGKT +++P
Sbjct: 27 GQWRALNVGPDLIRSLLIRKFKTPTPIQRAAIPPALSTPPRDILGMARTGSGKTLAYLIP 86
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT---------------- 503
+L++ G+ RALIL P+RELA+Q ++L +
Sbjct: 87 LLQR----TGSTHHGQGPRALILCPSRELAVQIYTVGKDLARGMNKGKGKGKNKNEDEED 142
Query: 504 -------GLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVV 662
GL A I+GGE ++ QF MS S+PDIV+ATPGRFLH+ +EM + L +++ V+
Sbjct: 143 EEGKGKEGLRWALIIGGEGMDAQFEKMS-SNPDIVIATPGRFLHLIVEMHMDLRHLQTVI 201
Query: 663 FDEADRLFELGFGEQLQEICARLPSSRQTLLFSATLPKMLVXFARAGL 806
+DEADRLFE+GF QLQEI RLPS+RQ LLFSATLP + FA+AGL
Sbjct: 202 YDEADRLFEMGFDVQLQEILHRLPSTRQNLLFSATLPSSVAEFAKAGL 249
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 171 bits (417), Expect = 1e-41
Identities = 87/197 (44%), Positives = 129/197 (65%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F ++GL+ P+L+ I+++ Y+ PTPIQ ++IP+ L G D+V +A+TG+GKTA FVLPIL +
Sbjct: 59 FTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAAFVLPILHR 118
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
+ +P P + RAL+L+PTRELA Q R GKFT + A ++GG Q M
Sbjct: 119 IAANRARPAP-RACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKPGPQARRM 177
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
S D++VATPGR L ++LD ++ VV DEAD++ +LGF +++I A+LP R
Sbjct: 178 E-SGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLGFIPAIRQIMAKLPRQR 236
Query: 744 QTLLFSATLPKMLVXFA 794
Q ++FSAT+PK + A
Sbjct: 237 QAVMFSATMPKPIRALA 253
>UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1;
Toxoplasma gondii|Rep: Dead-box helicase, putative -
Toxoplasma gondii
Length = 822
Score = 171 bits (417), Expect = 1e-41
Identities = 94/203 (46%), Positives = 132/203 (65%), Gaps = 1/203 (0%)
Frame = +3
Query: 201 AFQSMGLSFPV-LKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 377
AF+++GLS P L I G+ QPTPIQR+ IP+ L GKD + M+RTGSGKTACF+LP+L
Sbjct: 25 AFETLGLSTPTSLAAIKGLGFSQPTPIQRRAIPLLLKGKDCILMSRTGSGKTACFLLPLL 84
Query: 378 EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
+ L+ + G +RA++++PTREL Q R +L + L +LGGE+ +QF
Sbjct: 85 D--LLGEHSSVVG--VRAVLIAPTRELVAQIHRVCSKLLHSSSLRVCCLLGGENYSKQFL 140
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+S +PD+++ T GR + + L L + +V DEADR+FELG+ EQL + A LP+
Sbjct: 141 ALS-RNPDVLLTTVGRGSQLIHDKVLSLSAARFLVLDEADRIFELGWKEQLSMLFAALPA 199
Query: 738 SRQTLLFSATLPKMLVXFARAGL 806
S+Q +L SATLP LV FAR GL
Sbjct: 200 SKQVVLVSATLPGDLVNFARLGL 222
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 171 bits (417), Expect = 1e-41
Identities = 83/189 (43%), Positives = 126/189 (66%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F S+GLS +L+ + ++GY++PTPIQ++ IP L G+D++A A+TG+GKTA F LP+L+
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
L+ + +RALIL+PTRELA Q VR+ K+ + S + GG SI Q
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ G D++VATPGR L + + +KLD ++I+V DEADR+ ++GF ++ + +LP+
Sbjct: 122 LRG-GVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180
Query: 741 RQTLLFSAT 767
RQ LLFSAT
Sbjct: 181 RQNLLFSAT 189
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 171 bits (416), Expect = 2e-41
Identities = 91/203 (44%), Positives = 128/203 (63%), Gaps = 1/203 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + LS P+L+ GYK+PTPIQ IP+ALTG+D+ A A TGSGKTA F LP LE+
Sbjct: 169 FMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLER 228
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
LL +P R LIL+PTRELA+Q ++ L +FT + I+GG S+ +Q V+
Sbjct: 229 LLF---RPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQ-EVV 284
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
S PDIVVATPGR + H+ M + LD++ +++ DEADRL + GF ++ E+ P
Sbjct: 285 LRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKR 344
Query: 741 RQTLLFSATLPKMLVXFARAGLS 809
RQT+LFSAT+ + + + L+
Sbjct: 345 RQTMLFSATMTEEVKELVKLSLN 367
>UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 703
Score = 170 bits (414), Expect = 3e-41
Identities = 91/197 (46%), Positives = 125/197 (63%)
Frame = +3
Query: 219 LSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPN 398
L P LK T Y++PTPIQ++ IP+ L DVVAM++TGSGKTA F+LPI++KL
Sbjct: 8 LEGPALKVATTM-YRKPTPIQKEVIPVVLADHDVVAMSKTGSGKTASFLLPIVQKL---- 62
Query: 399 NKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSP 578
N+ + R LI++P+RELALQT + ++ T L A I+GGE++ QF ++ +P
Sbjct: 63 NEHSTITGCRCLIITPSRELALQTGHYFQKYASQTNLKCAQIIGGEALPPQFESLT-KNP 121
Query: 579 DIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 758
D+++ATPGR L I E L ++I+V DEAD LFE G Q+ I LP Q+LLF
Sbjct: 122 DVIIATPGRLLQIIAETQYSLSRVQIIVIDEADLLFEQGLEPQMTAILKLLPEKHQSLLF 181
Query: 759 SATLPKMLVXFARAGLS 809
SAT+P +L F R LS
Sbjct: 182 SATVPSVLAEFTRINLS 198
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 169 bits (411), Expect = 7e-41
Identities = 87/203 (42%), Positives = 130/203 (64%), Gaps = 2/203 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +GL ++K +T+ GY PTPIQ K IP L GK+V+A A+TG+GKTA FVLP+L +
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 384 LL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGG-ESIEQQFN 557
P +P K +RA+IL+PTRELALQ + + K+ LT+ A+ GG ++ Q+
Sbjct: 63 FADAPKIRP---KRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKR 119
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
++ G D++VATPGR L + + ++ D + ++V DEADR+ ++GF E + I +LP
Sbjct: 120 LIEGV--DLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINSIIEKLPE 177
Query: 738 SRQTLLFSATLPKMLVXFARAGL 806
RQ LLFSATL K + A++ +
Sbjct: 178 QRQNLLFSATLSKQVKALAKSAI 200
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 166 bits (404), Expect = 5e-40
Identities = 84/205 (40%), Positives = 124/205 (60%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
+ F+S+GL P+++ ++ GY++PTPIQR +P L GKD++ +A TG+GKTA F LP
Sbjct: 34 ADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLP 93
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 551
+L+++ + P AL+L PTRELA+Q + G+ G++ + GG+ I QQ
Sbjct: 94 LLQRITPGAHAPFTAS---ALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQ 150
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
V+ D+VVATPGR L LKL+ +++VV DEAD + ++GF E L+ I +
Sbjct: 151 LRVLK-RGVDVVVATPGRALDHLQRKTLKLEQVRVVVLDEADEMLDMGFAEDLEAILSST 209
Query: 732 PSSRQTLLFSATLPKMLVXFARAGL 806
P RQT LFSATLP + A L
Sbjct: 210 PEKRQTALFSATLPPRIASIAERHL 234
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 165 bits (402), Expect = 9e-40
Identities = 87/203 (42%), Positives = 125/203 (61%), Gaps = 1/203 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+FQ M LS P+LK IT G+KQPTPIQ+ IP+ L GKD+ A A TG+GKTA F LP+LE
Sbjct: 219 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 278
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+L+ KP R L+L PTREL +Q R+L +F +T+ +GG ++ Q
Sbjct: 279 RLIY---KPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAA 335
Query: 561 MSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+ ++PDI++ATPGR + H+ L +I++++ DEADR+ + F EQ++EI
Sbjct: 336 LR-AAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSH 394
Query: 738 SRQTLLFSATLPKMLVXFARAGL 806
RQT+LFSAT+ + A L
Sbjct: 395 HRQTMLFSATMTDEVKDLASVSL 417
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 165 bits (401), Expect = 1e-39
Identities = 80/193 (41%), Positives = 124/193 (64%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +GLS PVL+ + +GY PTPIQ + IP L G+D++ +A+TG+GKTA F+LP +++
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L +N+ P K+ R L+L+PTREL Q ++ G GL +I+GG S+ + N +
Sbjct: 64 LREADNR-IPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRNKL 122
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+ DI++ATPGR L + + L +++++V DEAD++ +LGF L+ I +P R
Sbjct: 123 HRGT-DILIATPGRLLDLIDQKAFNLGSVEVLVLDEADQMLDLGFVHALRRISQLVPKER 181
Query: 744 QTLLFSATLPKML 782
QTL FSAT+PK +
Sbjct: 182 QTLFFSATMPKAI 194
>UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 783
Score = 165 bits (401), Expect = 1e-39
Identities = 96/209 (45%), Positives = 129/209 (61%), Gaps = 5/209 (2%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGIT-KRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
+GAF +GL + + K YKQP+ IQR+TIP L G+DVV +ARTGSGKTA ++ P
Sbjct: 21 TGAFGLLGLDRTLCYALEHKLRYKQPSTIQRRTIPAVLQGRDVVCIARTGSGKTAAYLAP 80
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT----GLTSAAILGGES 539
+++ L+ + T G +R LIL PTRELALQ +++ FT L SA ++GGES
Sbjct: 81 VVQ--LLEGHSRTVG--VRCLILLPTRELALQVSSVLKKFIAFTKRDDALRSATLIGGES 136
Query: 540 IEQQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEI 719
+E QF ++ +PD+VVATPGR E + L + V DEAD+LFE+GF + I
Sbjct: 137 VEGQFGALT-FNPDLVVATPGRLSQHIAEKSIDLTLVTHFVIDEADKLFEMGFMPDVYRI 195
Query: 720 CARLPSSRQTLLFSATLPKMLVXFARAGL 806
+RLP RQT+L SATLP L F GL
Sbjct: 196 LSRLPEKRQTMLVSATLPSELTEFVNFGL 224
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 163 bits (397), Expect = 4e-39
Identities = 84/202 (41%), Positives = 127/202 (62%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+++ L P+LK + + GY PTPIQ ++IPI L GKD++ A+TG+GKTA F +PIL+K
Sbjct: 3 FENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQK 62
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L +++ K ++AL+L+PTRELA+Q G++TGL A I GG + Q + +
Sbjct: 63 LYKTDHR----KGIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDAL 118
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
S I+VATPGR L + + + L ++ V DEADR+ ++GF ++ I LP+ R
Sbjct: 119 R-SGIQILVATPGRLLDLISQGFISLSSLDFFVLDEADRMLDMGFIHDIKRILKLLPARR 177
Query: 744 QTLLFSATLPKMLVXFARAGLS 809
QTL FSAT+P + A + L+
Sbjct: 178 QTLFFSATMPPEIETLANSMLT 199
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 163 bits (395), Expect = 6e-39
Identities = 87/191 (45%), Positives = 120/191 (62%), Gaps = 1/191 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
AF + LS P+ + GYK+PTPIQ IPIA+TG+DV A TGSGKTA F+LP LE
Sbjct: 149 AFDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGRDVCGRAVTGSGKTAAFMLPQLE 208
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
++L + P P L+L PTRELA+Q + L +FT + + ++GG S Q
Sbjct: 209 RML--HRGPRPAAATHVLVLVPTRELAVQVHQMTESLAQFTTIRAVLVVGGLSANVQAAA 266
Query: 561 MSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+ + P+IVVATPGR + H+ L+++ ++ DEADRL E+GF E+++EI + P
Sbjct: 267 LR-TRPEIVVATPGRVIDHVRNTHSFGLEDLATLILDEADRLLEMGFLEEIKEIVRQCPK 325
Query: 738 SRQTLLFSATL 770
RQTLLFSATL
Sbjct: 326 KRQTLLFSATL 336
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 162 bits (394), Expect = 8e-39
Identities = 83/202 (41%), Positives = 125/202 (61%), Gaps = 1/202 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +M LS P+LK +T + PTPIQ TIP+AL G+D+ A TG+GKTA ++LP LE+
Sbjct: 156 FYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAATGTGKTAAYMLPTLER 215
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
LL +P G R L+L PTREL +Q + ++L +FT + +GG ++ Q +V+
Sbjct: 216 LLY---RPLDGAVTRVLVLVPTRELGVQVYQVTKQLSQFTSVEVGLSVGGLDVKVQESVL 272
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+PDIV+ATPGR + H+ LD I++++ DEADR+ + F EQ++ I + +
Sbjct: 273 R-KNPDIVIATPGRLIDHLANTPTFSLDTIEVLILDEADRMLDEYFAEQMKHIVRQCART 331
Query: 741 RQTLLFSATLPKMLVXFARAGL 806
RQT+LFSAT+ + + A L
Sbjct: 332 RQTILFSATMTEEVKDLAAVSL 353
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 162 bits (394), Expect = 8e-39
Identities = 83/187 (44%), Positives = 122/187 (65%)
Frame = +3
Query: 213 MGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLV 392
M +S + K + + +PT IQ K IP+ LTGKDV+ ++TGSGKTA ++LP+L +
Sbjct: 1 MDISENLKKSLGLMKFTEPTEIQEKAIPVVLTGKDVIIRSKTGSGKTAAYLLPVLNSV-- 58
Query: 393 PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGS 572
+ GK+++A+I+ PTRELALQT R LGK +G+ S + GG SI +Q + GS
Sbjct: 59 ---EKLKGKSVKAIIILPTRELALQTHRVASRLGKISGIKSTIVYGGASIIRQVEELPGS 115
Query: 573 SPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTL 752
DIV+ TPGR L + + LKLD++K +V DEAD + ++GF + +++I + P RQT+
Sbjct: 116 --DIVIGTPGRILDLYNQKYLKLDHVKYLVLDEADLMLDMGFIDDIKKIISFTPEGRQTI 173
Query: 753 LFSATLP 773
L SATLP
Sbjct: 174 LLSATLP 180
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 161 bits (391), Expect = 2e-38
Identities = 86/202 (42%), Positives = 124/202 (61%), Gaps = 1/202 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
FQ M LS P+LK I+ + QPTPIQ+ IP+ L GKD+ A A TG+GKTA F+LP+LE+
Sbjct: 183 FQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLER 242
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L+ KP R L+L PTREL +Q R+L +FT +T+ +GG ++ Q +
Sbjct: 243 LIY---KPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTEVTTCLAVGGLDVKTQEAAL 299
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
S PD+++ATPGR + H+ L+ I++++ DEADR+ + F EQ++EI
Sbjct: 300 R-SGPDVLIATPGRLIDHLHNCPSFSLNCIEVLILDEADRMLDEYFEEQMKEIIRLCSHQ 358
Query: 741 RQTLLFSATLPKMLVXFARAGL 806
RQTLLFSAT+ + + A L
Sbjct: 359 RQTLLFSATMSEEVKDLASVSL 380
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 161 bits (391), Expect = 2e-38
Identities = 80/192 (41%), Positives = 121/192 (63%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
+S +F +GLS P+LK I +GY +P+ IQ + IP L G+DV+A A+TG+GKTA F LP
Sbjct: 3 TSMSFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLP 62
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 551
+LE ++ + +RAL+L+PTRELA Q V+ G+ L S + GG I Q
Sbjct: 63 LLE--ILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQ 120
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
+ + DI++ATPGR + + + ++ D ++++V DEADR+ ++GF +++I A L
Sbjct: 121 MMALRRGA-DILIATPGRMMDLYNQKAVRFDKLEVLVLDEADRMLDMGFIHDIKKILAIL 179
Query: 732 PSSRQTLLFSAT 767
P RQ LLFSAT
Sbjct: 180 PKKRQNLLFSAT 191
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 161 bits (391), Expect = 2e-38
Identities = 89/208 (42%), Positives = 128/208 (61%), Gaps = 3/208 (1%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
+ +F + LS PVL+ ++ + +PTPIQ +TIPIAL GKD+VA A TGSGKTA F++P
Sbjct: 331 AESSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIP 390
Query: 372 ILEKLLVPNNKPTPGK-NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQ 548
+E+L TP + R LIL+PTRELA+Q + + KFT + +GG S++
Sbjct: 391 TIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVGGLSVKS 450
Query: 549 QFNVMSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICA 725
Q + P++V+ATPGR + H+ LD+I+I+V DEADR+ E GF ++L EI
Sbjct: 451 QEAELK-LRPEVVIATPGRLIDHVRNSASFTLDDIEILVMDEADRMLEDGFADELNEIVK 509
Query: 726 RLP-SSRQTLLFSATLPKMLVXFARAGL 806
P +RQT+LFSAT+ + R L
Sbjct: 510 SCPKGARQTMLFSATMTDDVEQLVRLSL 537
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 161 bits (390), Expect = 3e-38
Identities = 87/190 (45%), Positives = 118/190 (62%), Gaps = 2/190 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F GL+ +LK I ++GY PTPIQ K IP+ L+G+DV+ A+TG+GKTA F LPI+++
Sbjct: 13 FDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQR 72
Query: 384 LL-VPNNKPTPGKN-LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
LL N +P ++ +RALIL+PTRELA Q V K T L SA + GG + Q
Sbjct: 73 LLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMA 132
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+ +I++ATPGR L + L ++I+V DEADR+ ++GF LQ I LP
Sbjct: 133 ELR-RGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNLLPK 191
Query: 738 SRQTLLFSAT 767
RQTLLFSAT
Sbjct: 192 ERQTLLFSAT 201
>UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12217_14094 - Giardia lamblia
ATCC 50803
Length = 625
Score = 160 bits (389), Expect = 3e-38
Identities = 84/203 (41%), Positives = 127/203 (62%), Gaps = 1/203 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
++Q + LS + + + + G+K PT +Q K IPI L G+D + A TGSGKT F +P+LE
Sbjct: 2 SWQGLSLSRQLTRAVLRLGWKFPTTVQEKVIPIVLAGRDALVSAVTGSGKTGAFGIPLLE 61
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
++++ + T G ALILSPTRELA QT ++EL FT ++GG +Q
Sbjct: 62 RMIL-RGRDTYGTT--ALILSPTRELAAQTAAVLQELAYFTNFRVYLLIGGTDTAKQAAQ 118
Query: 561 MSGSSPDIVVATPGRFLHICIEMC-LKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+ + PDI+VATPGR + + LD I+++V DE D++ ++GF ++L+EICA P
Sbjct: 119 LR-TEPDIIVATPGRLIDLVRNTVNFSLDTIEVLVLDEGDKMLDIGFHDELKEICALCPV 177
Query: 738 SRQTLLFSATLPKMLVXFARAGL 806
+RQTLLFSAT+ K ++ F+ L
Sbjct: 178 ARQTLLFSATMEKEVLSFSLLAL 200
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 160 bits (388), Expect = 4e-38
Identities = 80/190 (42%), Positives = 123/190 (64%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
FQ +GLS V+K I + G+++ TPIQ KTIP++L KDV+ A+TG+GKTA F +PI+EK
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK 63
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
+ V N+ ++AL+++PTRELA+Q + ++G + I GG+ IE+Q +
Sbjct: 64 VNVKNSA------VQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRAL 117
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
P ++V TPGR + L+L+++ VV DEAD + +GF E ++ I + +P+ R
Sbjct: 118 K-KHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAER 176
Query: 744 QTLLFSATLP 773
QTLLFSAT+P
Sbjct: 177 QTLLFSATMP 186
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 159 bits (387), Expect = 6e-38
Identities = 87/201 (43%), Positives = 125/201 (62%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +GLS P+++ I + GY+ PTPIQ + IP L G DV+ +A+TG+GKTA F LP+L+K
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQK 352
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L + R+LIL PTRELALQ + GK+ LT A ++GGES+ +Q +V+
Sbjct: 353 LA---GSRARARMPRSLILEPTRELALQVAENFKLYGKYLRLTHALLIGGESMAEQRDVL 409
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+ D+++ATPGR L + L L +V DEADR+ ++GF +++I A LP+ R
Sbjct: 410 N-RGVDVLIATPGRLLDLFGRGGLLLTQTSTLVIDEADRMLDMGFIPDIEKIVALLPAHR 468
Query: 744 QTLLFSATLPKMLVXFARAGL 806
QTL FSAT+ + A A L
Sbjct: 469 QTLFFSATMAPEIRRLADAFL 489
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 159 bits (387), Expect = 6e-38
Identities = 93/194 (47%), Positives = 121/194 (62%), Gaps = 3/194 (1%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F S+GLS ++ GYK+PT IQ K IP L G D++A A TGSGKTA FVLP+LE
Sbjct: 2 SFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLLE 61
Query: 381 KLLVPNNKPTPGKNL-RALILSPTRELALQTLRFVRELGKFTG--LTSAAILGGESIEQQ 551
KL ++ P PG NL AL+L PTRELA+Q + V + + S AI GG +I Q
Sbjct: 62 KL---HSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQ 118
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
+S DIVVATPGR L + + L L +K +V DEADR+ +LGF ++L +I +
Sbjct: 119 MQSLSKGC-DIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLGFADELDDILDQT 177
Query: 732 PSSRQTLLFSATLP 773
P + QTLLFSAT P
Sbjct: 178 PGNVQTLLFSATFP 191
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 159 bits (386), Expect = 8e-38
Identities = 81/190 (42%), Positives = 123/190 (64%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ + LS VLK + G+++P+PIQ + IP L GKDV+ A+TG+GKTA F +PI+E+
Sbjct: 8 FRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVER 67
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
LVP + ++AL+L+PTRELA+Q + ++G+ + + AI GG+SIE+Q +
Sbjct: 68 -LVPGQRA-----VQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSL 121
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
D+V+ TPGR L L L +++VV DEAD + ++GF E +++I P+ R
Sbjct: 122 R-FGVDVVIGTPGRILDHLGRSTLDLSQVRMVVLDEADEMLDMGFIEDIEKILQNTPAER 180
Query: 744 QTLLFSATLP 773
QTLLFSAT+P
Sbjct: 181 QTLLFSATMP 190
>UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog;
n=39; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase srmB homolog - Haemophilus influenzae
Length = 439
Score = 159 bits (386), Expect = 8e-38
Identities = 88/199 (44%), Positives = 125/199 (62%), Gaps = 2/199 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ LS +LK + K+GY +PT IQ + IP A+ DV+ A TG+GKTA F+LP L+
Sbjct: 6 FEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPALQH 65
Query: 384 LL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
LL P KP P R L+L+PTRELA+Q EL +FT L A I GG + + +V
Sbjct: 66 LLDYPRRKPGPP---RILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHGDV 122
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ ++ D+VVATPGR L E ++++++FDEADR+ ++GFG+ ++I A
Sbjct: 123 FN-TNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRWR 181
Query: 741 RQTLLFSATLP-KMLVXFA 794
+QTLLFSATL ++LV FA
Sbjct: 182 KQTLLFSATLEGELLVDFA 200
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 159 bits (385), Expect = 1e-37
Identities = 85/201 (42%), Positives = 127/201 (63%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +GLS PV + IT+ GY PTPIQ + IP+ L G+DV+ A+TG+GKTA F LP+++
Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDI 284
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L +++ + R+LIL PTRELALQ + G++ L A ++GGES+ Q +V+
Sbjct: 285 L---SDRRARARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMNDQRDVL 341
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
S D+++ATPGR + + L L + +I+V DEADR+ ++GF ++ I + LP +R
Sbjct: 342 S-KGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLDMGFIPDVERIVSLLPHNR 400
Query: 744 QTLLFSATLPKMLVXFARAGL 806
QTL FSAT+ + A A L
Sbjct: 401 QTLFFSATMAPEIRRLADAFL 421
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 158 bits (384), Expect = 1e-37
Identities = 82/198 (41%), Positives = 124/198 (62%), Gaps = 1/198 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+S+ + P+L+ I + GY+ PTPIQ + IP+ L G D++ A+TG+GKTA F +P+L+
Sbjct: 84 FRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFAIPVLQL 143
Query: 384 L-LVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
L V N+ + +R+LI++PTRELA+Q + G+ TGLTS I GG + Q
Sbjct: 144 LNAVKTNEKK--RKIRSLIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNPQTAS 201
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ DI++ATPGR L + + L L NI+ V DEADR+ ++GF +++I A LP
Sbjct: 202 LQ-KGIDILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLDMGFIHDIRKILAELPKK 260
Query: 741 RQTLLFSATLPKMLVXFA 794
+Q+L FSAT+P + A
Sbjct: 261 KQSLFFSATMPPEITRLA 278
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 158 bits (384), Expect = 1e-37
Identities = 76/195 (38%), Positives = 120/195 (61%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
+S F GL+ P+ + + + PTPIQ + IP AL G+D++ +A+TG+GKTA F LP
Sbjct: 2 TSTTFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALP 61
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 551
+L L+ KPT + +ALILSPTRELA+Q + +L + T ++ + GG S+ Q
Sbjct: 62 LLHHLMTVGGKPTT-RTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQ 120
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
++ DI+VATPGR L + + + L + ++ DEADR+ ++GF + +I +
Sbjct: 121 IQALA-RGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRDVMKIVGKC 179
Query: 732 PSSRQTLLFSATLPK 776
P RQ+++FSAT+PK
Sbjct: 180 PDDRQSMMFSATMPK 194
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 158 bits (383), Expect = 2e-37
Identities = 89/205 (43%), Positives = 123/205 (60%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
S+ +F + LS L + + G++ PTPIQ + IP AL GKDV+ A TG+GKTA F+LP
Sbjct: 2 STTSFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLP 61
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 551
++++L KP RAL+L+PTRELALQ + G + A I+GG + QQ
Sbjct: 62 LIDRLA---GKP----GTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQ 114
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
+ +IV+ATPGR + + +LD I+ +V DEADR+ ++GF QL I RL
Sbjct: 115 AEALR-QKREIVIATPGRLVDHLEQGNARLDGIEALVLDEADRMLDMGFKPQLDRILRRL 173
Query: 732 PSSRQTLLFSATLPKMLVXFARAGL 806
P RQTLLFSAT+ + FARA L
Sbjct: 174 PKQRQTLLFSATMAGEVADFARAHL 198
>UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 732
Score = 158 bits (383), Expect = 2e-37
Identities = 85/189 (44%), Positives = 118/189 (62%), Gaps = 1/189 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ LS+ L+G+ Y +PT IQR TI +LTG DVV A+TGSGKT V+P+LE
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L K +P L ALI+SPTRELALQT + +G G + ++GG + + N +
Sbjct: 138 LW--RAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRI 195
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
SG +I+V TPGR L H+ + D+++++V DEADR+ ++GF +QL I LP+
Sbjct: 196 SGI--NIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAE 253
Query: 741 RQTLLFSAT 767
RQTLLFSAT
Sbjct: 254 RQTLLFSAT 262
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 157 bits (382), Expect = 2e-37
Identities = 82/190 (43%), Positives = 120/190 (63%), Gaps = 2/190 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +GLS +L + GY PTPIQ + IP L GKDV+A A+TG+GKTA F LP+L +
Sbjct: 7 FAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLYR 66
Query: 384 L-LVPNNKPTPGKN-LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
L N +P ++ +RALI++PTRELA+Q VR+ GK+ L +A + GG +IE Q
Sbjct: 67 LQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQIA 126
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+ + +I+VATPGR L + + + +I+V DEADR+ ++GF ++ + A L
Sbjct: 127 ALQ-AGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPDIKRVMALLSP 185
Query: 738 SRQTLLFSAT 767
RQ+L+FSAT
Sbjct: 186 QRQSLMFSAT 195
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 157 bits (382), Expect = 2e-37
Identities = 81/188 (43%), Positives = 120/188 (63%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ + L ++ I + GY PTPIQ TIP L GKD++A A+TG+GKTA F+LPI+E
Sbjct: 26 FEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPIIE- 84
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
LL +KP + + +L+L+PTRELA Q + K+ L S A+ GG SI Q +
Sbjct: 85 LLRAEDKPKRYQ-VHSLVLTPTRELAAQVEASAKAYTKYLALRSDAVFGGVSIRPQVKRL 143
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
G DI+VATPGR L + + ++ DN+K++V DEADR+ ++GF ++++ LP +R
Sbjct: 144 QGGV-DILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRDIKKVIEYLPKNR 202
Query: 744 QTLLFSAT 767
Q ++FSAT
Sbjct: 203 QNMMFSAT 210
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 157 bits (380), Expect = 4e-37
Identities = 84/207 (40%), Positives = 128/207 (61%), Gaps = 8/207 (3%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F + L ++ + + Y+QPTPIQ + IP+ L+GKDV+A A+TG+GKTA F LP+L
Sbjct: 2 SFADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLLH 61
Query: 381 KLLV--------PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGE 536
+LL P+ + + AL+L PTRELA Q + + + +TS + GG
Sbjct: 62 QLLTHQDNLAAQPDTQHINSTPITALVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGGV 121
Query: 537 SIEQQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQE 716
SI +Q ++ + I+VATPGR L + + L L + +VFDEADR+ ++GF +++ E
Sbjct: 122 SIGEQIRQLANGT-HILVATPGRLLDLLRKRALSLSQLTHLVFDEADRMLDMGFKDEIVE 180
Query: 717 ICARLPSSRQTLLFSATLPKMLVXFAR 797
+ RLPS+RQTLLFSATL ++ F+R
Sbjct: 181 VLKRLPSTRQTLLFSATLDDRMLSFSR 207
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 157 bits (380), Expect = 4e-37
Identities = 82/202 (40%), Positives = 122/202 (60%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +GLS ++ G+ + PTPIQ + IP L G+DV+ +A+TG+GKTA F LP+L+
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L+ KP P + R LIL+PTREL Q +R + + L I+GG +I Q
Sbjct: 133 LMKAGTKPAP-RTCRGLILAPTRELVSQICESLRAFTEGSHLKLQVIVGGVAIGPQIK-R 190
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+ D++VATPGR + + L+L + +V DEAD++ +LGF L++I LP+ R
Sbjct: 191 AERGADLIVATPGRLIDLLDRKALRLSETRFLVLDEADQMLDLGFIHALRKIAPLLPAER 250
Query: 744 QTLLFSATLPKMLVXFARAGLS 809
QT+LFSAT+PK + +RA L+
Sbjct: 251 QTMLFSATMPKQMEELSRAYLT 272
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 156 bits (379), Expect = 5e-37
Identities = 86/190 (45%), Positives = 114/190 (60%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F M LS P+ + +RGY PTP+Q + A+ GKD++ ++TG+GKTA F LP+LEK
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
+ P + +RALIL PTRELALQ ++ L K GL AAI GG S++QQ + +
Sbjct: 91 I------PADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMKQQEDAL 144
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+P I+V TPGR LKLD V DEAD + GF E++ I RLP +R
Sbjct: 145 EEGTP-IIVGTPGRVFDHINRGNLKLDACDHAVLDEADEMLNQGFYEEVTRILDRLPKTR 203
Query: 744 QTLLFSATLP 773
Q LLFSAT+P
Sbjct: 204 QVLLFSATVP 213
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 156 bits (378), Expect = 7e-37
Identities = 84/189 (44%), Positives = 115/189 (60%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F S+GL P+L+ + Y+ PTP+Q K IP L GKDV+A A+TG+GKTA F LP+L+
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQ 61
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+ LV + R L+L PTRELA Q L+ GK L A GG SI Q
Sbjct: 62 R-LVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMK 120
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ D++VATPGR L + + ++ D ++ +V DEADR+ +LGF +L + A LP+
Sbjct: 121 LR-KGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPAQ 179
Query: 741 RQTLLFSAT 767
RQTLLFSAT
Sbjct: 180 RQTLLFSAT 188
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 156 bits (378), Expect = 7e-37
Identities = 83/203 (40%), Positives = 125/203 (61%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F+++GL ++ I +GY T IQR+ IP+ L D++A+A+TG+GKTA F LP+L+
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQ 61
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+L + G +R+LI++PTRELA Q V + S A+ GG IE Q
Sbjct: 62 RLAAKQSTKVQG--VRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYGGVRIEPQIAQ 119
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ D+++ATPGR L + + L +N++I+VFDEADR+ +LGF + ++ I + LP
Sbjct: 120 LQ-EGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFIDDVKRIQSLLPVK 178
Query: 741 RQTLLFSATLPKMLVXFARAGLS 809
RQTLLFSAT K + FAR L+
Sbjct: 179 RQTLLFSATFSKQIKHFAREMLN 201
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 156 bits (378), Expect = 7e-37
Identities = 83/199 (41%), Positives = 123/199 (61%), Gaps = 1/199 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +S +L+ I G+++PTPIQ IP L GKDV A+TG+GKTA F +PI+E+
Sbjct: 7 FAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPIIER 66
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT-GLTSAAILGGESIEQQFNV 560
L P+NK N++AL+LSPTRELA+QT L K+ GL I GG+ IE+Q
Sbjct: 67 L-DPDNK-----NVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRA 120
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ G+ +V+ TPGR + L LD++ + + DEAD++ ++GF E +++I P
Sbjct: 121 LKGTV-QVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIEDIFRDTPKD 179
Query: 741 RQTLLFSATLPKMLVXFAR 797
RQT+LFSAT+P+ ++ R
Sbjct: 180 RQTILFSATMPQPILDITR 198
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 155 bits (377), Expect = 9e-37
Identities = 85/199 (42%), Positives = 121/199 (60%), Gaps = 1/199 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ +GLS V++ I GY + TPIQ KTIPI +TGKD+ A+TG+GKTA F +P +E
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQQFNV 560
+ + N+ ++LIL PTRELALQ +++L KF GL A+ GGESIE+Q
Sbjct: 63 VDISINQ------TQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRD 116
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ + IVV TPGR + L ++ ++ DEAD + +GF E ++ I RLP
Sbjct: 117 LKAGA-HIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFREDIELILTRLPEE 175
Query: 741 RQTLLFSATLPKMLVXFAR 797
RQT+LFSATL ++ A+
Sbjct: 176 RQTVLFSATLAPPILALAK 194
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 155 bits (377), Expect = 9e-37
Identities = 83/190 (43%), Positives = 120/190 (63%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F SMGL +L+ I ++G+++PTPIQ K+IPIA+ G D++ A+TG+GKTA F +PIL
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPIL-- 63
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
N+ G+ L+AL+L PTRELA+Q + L + + AI GG+SIE Q +
Sbjct: 64 -----NRVIKGEGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSL 118
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+P+I+V TPGR + + L +K VV DEAD + ++GF +Q+I ++ P R
Sbjct: 119 R-RNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPDIQKILSQCPRER 177
Query: 744 QTLLFSATLP 773
QT LFSATLP
Sbjct: 178 QTFLFSATLP 187
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 155 bits (377), Expect = 9e-37
Identities = 85/201 (42%), Positives = 118/201 (58%), Gaps = 2/201 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F L + K I +GY QPTPIQ K IP+ +TG DV+ A+TG+GKTA F LPIL +
Sbjct: 22 FADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPILNR 81
Query: 384 LL-VPNNKPTPGKN-LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
L+ + +P ++ +RALIL+PTRELA Q V KFT L S + GG I Q
Sbjct: 82 LMPLATENTSPARHPVRALILTPTRELADQVAANVHTYAKFTPLRSTVVYGGVDINPQIQ 141
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+ ++V+ATPGR L + + L ++++V DEADR+ ++GF LQ I LP
Sbjct: 142 TLR-RGVELVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLDMGFLPDLQRIINLLPK 200
Query: 738 SRQTLLFSATLPKMLVXFARA 800
+RQ LLFSAT + A++
Sbjct: 201 TRQNLLFSATFSPEIQKLAKS 221
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 155 bits (377), Expect = 9e-37
Identities = 86/202 (42%), Positives = 117/202 (57%), Gaps = 1/202 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F LS +L+ + + Y PT IQ+ IP + GKD++A ARTG+GKTA F LPILEK
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 384 LLVPN-NKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
L NK P R L+L PTRELA Q + ++ K + + GG S Q
Sbjct: 63 LSSKERNKKRP--QTRVLVLVPTRELANQVTQNIKSYAKKLPFKTLPVFGGVSSYPQIQA 120
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ S DIVVATPGR L + ++ L L++I +VFDEADR+F++GF +++I LP
Sbjct: 121 LK-SGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDMGFIHDIKQIVKMLPEK 179
Query: 741 RQTLLFSATLPKMLVXFARAGL 806
RQ LLFSAT P ++ + L
Sbjct: 180 RQNLLFSATYPSEVMSLCNSML 201
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 155 bits (377), Expect = 9e-37
Identities = 81/189 (42%), Positives = 123/189 (65%), Gaps = 1/189 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F ++GLS P+L I + GY Q T +Q++ IP+AL GKD++A A+TG+GKTA F LP+LE+
Sbjct: 24 FDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLEQ 83
Query: 384 L-LVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
L PN+KP LRAL+++PTRELA+Q +++ +F L + A+ GG ++ Q
Sbjct: 84 LSKQPNDKPL----LRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKG 139
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ DI+VATPGR I + L L ++ +V DEADR+ +LGF ++++ + +
Sbjct: 140 VE-QGVDILVATPGRLFDIIGQFHLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIATE 198
Query: 741 RQTLLFSAT 767
QT+LFSAT
Sbjct: 199 HQTMLFSAT 207
>UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p
- Drosophila melanogaster (Fruit fly)
Length = 782
Score = 155 bits (377), Expect = 9e-37
Identities = 85/204 (41%), Positives = 125/204 (61%), Gaps = 2/204 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F M LS P+++ I GY PTPIQ TIP+AL G+D+ A TG+GKTA ++LP LE
Sbjct: 158 SFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLE 217
Query: 381 KLLVPNNKPTPGKNL-RALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
+LL +P K + R L+L PTREL Q + ++L +FT + +GG ++ Q
Sbjct: 218 RLLY---RPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEA 274
Query: 558 VMSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
V+ +PDIV+ATPGR + HI LD+I++++ DEADR+ + F EQ++EI
Sbjct: 275 VLR-QNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSCC 333
Query: 735 SSRQTLLFSATLPKMLVXFARAGL 806
+RQT+LFSAT+ + + A L
Sbjct: 334 KTRQTMLFSATMSEQVKDLAAVSL 357
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 155 bits (377), Expect = 9e-37
Identities = 76/190 (40%), Positives = 122/190 (64%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
FQ LS ++K I + G+++ TPIQ +TIP+ L+ KDV+ A+TG+GKTA F +P++EK
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
+ N +P N++A++++PTRELA+Q + ++G+ I GG+ I +Q +
Sbjct: 65 I----NPESP--NIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRAL 118
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+P+I+V TPGR L ++L+N+ VV DEAD + +GF + ++ I + +PS
Sbjct: 119 K-KNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEH 177
Query: 744 QTLLFSATLP 773
QTLLFSAT+P
Sbjct: 178 QTLLFSATMP 187
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 155 bits (376), Expect = 1e-36
Identities = 80/201 (39%), Positives = 126/201 (62%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
++G F ++G++ +LKG+ G +P PIQ + IP L G+D++ +A+TGSGKTA F LP
Sbjct: 85 NTGGFAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLP 144
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 551
IL+K++ +K P K RALIL+PTRELA+Q + +R + K +++A +LGG S Q
Sbjct: 145 ILQKIIGLGDKRRP-KTARALILAPTRELAVQIEQTIRNVSKSAHISTALVLGGVSKLSQ 203
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
++ D+++ATPGR + + + L + +V DEADR+ ++GF ++ I
Sbjct: 204 IKRIA-PGIDVLIATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLDMGFINDVKRIAKAT 262
Query: 732 PSSRQTLLFSATLPKMLVXFA 794
+ RQT LFSAT+PK + A
Sbjct: 263 HAERQTALFSATMPKEIASLA 283
>UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n=2;
Theileria|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 839
Score = 155 bits (376), Expect = 1e-36
Identities = 90/209 (43%), Positives = 129/209 (61%), Gaps = 5/209 (2%)
Frame = +3
Query: 198 GAFQSMGLSFPVLKGITKR-GYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
G F ++GL P+ + KR Y QP+ IQRKTIP L G DV+ +ARTGSGKT ++ PI
Sbjct: 9 GPFGTLGLKKPICLTLQKRLRYDQPSAIQRKTIPHILAGSDVLCIARTGSGKTVAYIAPI 68
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG----LTSAAILGGESI 542
++ L+ + P G +R LIL PTRELALQ +++ F+ L + ++GG+S+
Sbjct: 69 VQ--LLDFHSPVVG--VRCLILLPTRELALQVEGVLKKFVNFSNQDDALRVSLLIGGKSV 124
Query: 543 EQQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEIC 722
E QF +S +PDIV+ATPGR ++ + L L + +V DEAD+LFE+GF + ++
Sbjct: 125 ESQFGSLS-FNPDIVIATPGRLVYHLEQKSLTLSLLTHLVIDEADKLFEMGFLPDVYKVF 183
Query: 723 ARLPSSRQTLLFSATLPKMLVXFARAGLS 809
A LP +Q +L SATLP L F GL+
Sbjct: 184 AYLPKIKQVILVSATLPTQLSEFVSFGLN 212
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 155 bits (376), Expect = 1e-36
Identities = 84/203 (41%), Positives = 127/203 (62%), Gaps = 1/203 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F+ +GLS +++ + K ++ PTP+Q KTIPIAL G+DV A A TGSGKTA F++P +E
Sbjct: 17 SFEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDVCASAVTGSGKTAAFLIPTVE 76
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+LL +K T + RA+ILSPTRELA QT + ++ +FT LT+ + GG S ++
Sbjct: 77 RLL--RSKSTEAQT-RAVILSPTRELAAQTYSVLSQIIQFTPLTALLLTGGSSNVKEEEE 133
Query: 561 MSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
PD +V TPGR + HI L+N+ ++V DE+DRL + GF Q++E+ LP
Sbjct: 134 RLLEYPDFLVCTPGRIIDHIKNCEGFTLENVLVLVLDESDRLLQEGFYSQIEEVHKSLPE 193
Query: 738 SRQTLLFSATLPKMLVXFARAGL 806
+ Q++L +AT+ + A L
Sbjct: 194 TTQSILVTATMNSSVSRLAEMSL 216
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 155 bits (375), Expect = 2e-36
Identities = 83/194 (42%), Positives = 119/194 (61%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
+ AF +GL ++K + GY PTPIQ + IP L KD+V +A+TG+GKTA F LP+
Sbjct: 102 ASAFSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAFALPL 161
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
+++LL+ N G++ RA+ILSPTRELALQ GK L +GG I +Q
Sbjct: 162 IQQLLM-NPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIRKQM 220
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
+S DI+VATPGR + + L+LD K +V DEAD++ ++GF ++ I +++
Sbjct: 221 RDLS-KGVDILVATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIGFLPAVKRIISKVN 279
Query: 735 SSRQTLLFSATLPK 776
RQTLLFSAT+ K
Sbjct: 280 KDRQTLLFSATMSK 293
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 155 bits (375), Expect = 2e-36
Identities = 88/205 (42%), Positives = 123/205 (60%), Gaps = 1/205 (0%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
+ +F LS L G+ + Y +PT IQR++I AL GKD++A A+TGSGKT F++P+
Sbjct: 61 TSSFSDFPLSKKTLGGLKQGQYHKPTAIQRESILPALQGKDILAAAKTGSGKTLAFLIPV 120
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
EKL N+ T L ALI++PTRELALQ V ++GK T+ I+GG++++ +
Sbjct: 121 FEKLY--TNQWTKLDGLGALIITPTRELALQIFETVAKIGKLHDFTTGLIIGGQNLKAEK 178
Query: 555 NVMSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
N + +I++ TPGR L H+ N+KI+V DEADR +LGF + I L
Sbjct: 179 NRL--HQLNIIICTPGRLLQHMDQNPLFDCTNLKILVLDEADRCLDLGFESAMNAIIENL 236
Query: 732 PSSRQTLLFSATLPKMLVXFARAGL 806
PS RQTLLFSAT K + AR L
Sbjct: 237 PSERQTLLFSATQTKSVKDLARLNL 261
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 154 bits (374), Expect = 2e-36
Identities = 83/206 (40%), Positives = 125/206 (60%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
+S +F+++GL +++ + GY +PTPIQ + IP L GKD+ +A+TG+GKTA F LP
Sbjct: 4 TSVSFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALP 63
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 551
+ L N + P + R LILSPTRELA Q R + + ++ A+ GG I +Q
Sbjct: 64 SIH-YLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQ 122
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
++ + DI+VATPGR L + + L L ++++ V DEAD++ +LGF L+ I L
Sbjct: 123 MRMLDRGT-DILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLDLGFIHALRRIDKLL 181
Query: 732 PSSRQTLLFSATLPKMLVXFARAGLS 809
P +RQTL FSAT+PK + + LS
Sbjct: 182 PKNRQTLFFSATMPKTIQELSSQFLS 207
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 154 bits (373), Expect = 3e-36
Identities = 82/197 (41%), Positives = 128/197 (64%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F GL VLKGI + G+ P+P+Q ++IPI L GKD++A A+TG+GKTA F +PIL
Sbjct: 47 FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNT 106
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L N+ K++ ALI++PTRELA+Q + +LG+F + + + GG+SI++Q +++
Sbjct: 107 L----NR---NKDIEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSIKRQCDLL 159
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
P ++ATPGR L + + +IVV DE+D + ++GF + ++EI LP++R
Sbjct: 160 E-KKPKAMIATPGRLLDHLQNGRIAHFSPQIVVLDESDEMLDMGFLDDIEEIFKFLPNTR 218
Query: 744 QTLLFSATLPKMLVXFA 794
QTLLFSAT+P+ + A
Sbjct: 219 QTLLFSATMPEPIKALA 235
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 154 bits (373), Expect = 3e-36
Identities = 81/190 (42%), Positives = 118/190 (62%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ +GL+ +LK + + GY++P+PIQ K IP AL G+DV+ A+TG+GKT F PIL++
Sbjct: 3 FRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQR 62
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L G+ +R+LIL+PTRELALQ GK L SA I GG + Q + +
Sbjct: 63 L---GGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKL 119
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
DI+VATPGR L + + + L ++I V DEADR+ ++GF ++ + LP+ +
Sbjct: 120 K-KGVDILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLDMGFLHDVRRVLKLLPAVK 178
Query: 744 QTLLFSATLP 773
QTL FSAT+P
Sbjct: 179 QTLFFSATMP 188
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 153 bits (372), Expect = 4e-36
Identities = 76/193 (39%), Positives = 117/193 (60%)
Frame = +3
Query: 219 LSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPN 398
LS + K + GYK+PTPIQR IP+AL G D++ A TG+GKT F +PI+EKL
Sbjct: 7 LSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKL--QK 64
Query: 399 NKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSP 578
KP +++AL+L+PTRELA+Q + L K+ L+S GG S++Q +++ +
Sbjct: 65 GKP----DVKALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNV 120
Query: 579 DIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLF 758
DI++ TPGR + L L ++ +V DE D++ ++GF E ++ I + LP R T +F
Sbjct: 121 DILIGTPGRIKDLIDRKALNLSKVEYLVLDEFDQMLDMGFIEDIEYIISFLPKERTTYMF 180
Query: 759 SATLPKMLVXFAR 797
SAT+P + A+
Sbjct: 181 SATVPSRIELLAK 193
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 153 bits (372), Expect = 4e-36
Identities = 81/197 (41%), Positives = 115/197 (58%), Gaps = 2/197 (1%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
S +F +G+ P+ +T+ Y PTPIQ TIP L+G+DV+A A TGSGKTA F +P
Sbjct: 7 SVASFAELGIIAPLCNRLTELTYAAPTPIQAATIPAVLSGRDVLAGANTGSGKTAAFAVP 66
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTL-RFVRELGKFTG-LTSAAILGGESIE 545
+L++L +R L+L PTRELA Q F+ F G L A GG S+
Sbjct: 67 LLQRLFEAKTAEKSAGQVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVN 126
Query: 546 QQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICA 725
Q + + D++VATPGR L + LKL+ + +V DEADR+ LGF ++L ++
Sbjct: 127 LQMQSLRAGA-DVLVATPGRLLDLLASNALKLNRVLALVLDEADRMLSLGFTDELNQVLE 185
Query: 726 RLPSSRQTLLFSATLPK 776
LP+ +QTLL+SAT P+
Sbjct: 186 ALPAKKQTLLYSATFPE 202
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 153 bits (371), Expect = 5e-36
Identities = 86/203 (42%), Positives = 124/203 (61%), Gaps = 1/203 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F + LS LKG+ + GY +PT IQR+TI + LTGKD++ A+TGSGKT F++PILE
Sbjct: 52 SFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPILE 111
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+L G L AL+++PTRELA Q +R +G+ ++ I+GG+ ++ + N
Sbjct: 112 RLYCKQWTRLDG--LGALVITPTRELAYQIFEELRRVGEHHEFSAGLIIGGKDLKFERNR 169
Query: 561 MSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
M +IV+ TPGR L H+ N++I+V DEADR ++GF + + I A LP+
Sbjct: 170 M--DQCNIVIGTPGRILQHMDENPLFDCVNMEILVLDEADRCLDMGFEQTMNAIVANLPA 227
Query: 738 SRQTLLFSATLPKMLVXFARAGL 806
RQTLLFSAT K + AR L
Sbjct: 228 KRQTLLFSATQTKSVRDLARLSL 250
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 153 bits (370), Expect = 7e-36
Identities = 93/208 (44%), Positives = 117/208 (56%), Gaps = 7/208 (3%)
Frame = +3
Query: 204 FQSMGLS---FPV-LKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
F S+G S P L+ I +GY+ PT IQ + IP L G+DVV A+TGSGKTA F LP
Sbjct: 3 FSSLGFSPALLPAFLRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALP 62
Query: 372 ILEKLL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG--LTSAAILGGESI 542
+L++L P P P R LIL PTRELA Q + K+ + A + GG SI
Sbjct: 63 MLQQLANAPTGTPRP---TRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSI 119
Query: 543 EQQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEIC 722
Q + G + DIVVATPGR L + LK+ + +V DEADRL +LGFGE+L I
Sbjct: 120 NPQMMNLRGGA-DIVVATPGRLLDLLEHNALKISEVSTLVLDEADRLLDLGFGEELGRIL 178
Query: 723 ARLPSSRQTLLFSATLPKMLVXFARAGL 806
LP RQ L FSAT P + A + L
Sbjct: 179 ELLPPRRQNLFFSATFPPAIEVLAESML 206
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 153 bits (370), Expect = 7e-36
Identities = 80/202 (39%), Positives = 119/202 (58%), Gaps = 4/202 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F G+ VL+ + GYK PTP+QR +IP L G+D++ ++TGSGKTA F+LP++ +
Sbjct: 123 FPGCGIRNEVLRNVAHNGYKVPTPVQRYSIPYILNGEDLIVTSQTGSGKTAAFMLPVITQ 182
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L+ + P P + L PTRELA+Q R+ K T L + + GG I +Q +
Sbjct: 183 LIGTCHSPNPS----CVALCPTRELAIQIFEETRKFCKGTDLKTTCVFGGAPITEQIRNL 238
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICA--RLP- 734
S DIV+ATPGR + I + C+ L ++ ++ DEADR+ ++GF Q+QE+ +P
Sbjct: 239 S-RGIDIVIATPGRLIDILKQHCITLSEVRFLILDEADRMLDMGFEPQMQEVINGWDMPP 297
Query: 735 -SSRQTLLFSATLPKMLVXFAR 797
RQT+LFSAT P + AR
Sbjct: 298 ADDRQTMLFSATFPDAVRNLAR 319
>UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP4 -
Ustilago maydis (Smut fungus)
Length = 869
Score = 153 bits (370), Expect = 7e-36
Identities = 79/202 (39%), Positives = 125/202 (61%), Gaps = 1/202 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + LS +G+ + GY T IQ K++ ++L GKDV+ ARTGSGKT F++P+LE
Sbjct: 60 FTQLPLSDRTCRGLKRAGYTDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIPVLE- 118
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
++ K P L AL++SPTRELA+Q +R++G + ++ ++GG+ ++Q+ + +
Sbjct: 119 -ILYRRKWGPSDGLGALVISPTRELAIQIFEVLRKIGSYHTFSAGLVIGGKDVKQEKDRL 177
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
S +I++ATPGR L H+ + N++++V DEADR+ ++GF L I LP +
Sbjct: 178 --SRINILIATPGRLLQHMDQTLGFDTSNVQVLVLDEADRILDMGFSRTLNAIVENLPRN 235
Query: 741 RQTLLFSATLPKMLVXFARAGL 806
RQT+LFSAT K + AR L
Sbjct: 236 RQTMLFSATQTKRVKDLARLSL 257
>UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Polynucleobacter sp. QLW-P1DMWA-1
Length = 500
Score = 152 bits (369), Expect = 9e-36
Identities = 80/198 (40%), Positives = 122/198 (61%), Gaps = 5/198 (2%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
FQ+ L+ +LK + + G+ Q T +Q + IP AL G D++ ++TGSGKTA F+LP++ +
Sbjct: 21 FQNFALAASLLKNVAELGFTQATSVQAQVIPAALAGGDLLVSSQTGSGKTAAFLLPLINQ 80
Query: 384 LLV--PNNKPTPGK-NLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQQ 551
L+ PNN P PG+ + L+L PTRELA Q L + G+ A ++GG +Q
Sbjct: 81 LIEDNPNNSPVPGRAQPKVLVLCPTRELAQQVAADAVNLVRGMKGIRIATVMGGMPYGKQ 140
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
+ G+ +VVATPGR L +C ++LD++K +V DEADR+ ++GF + L+ I R
Sbjct: 141 IQALKGAL--LVVATPGRLLDLCDSKAIRLDDVKQLVIDEADRMLDMGFADDLEAIDKRC 198
Query: 732 PSSRQTLLFSATL-PKML 782
QTL+FSAT PK++
Sbjct: 199 AGRNQTLMFSATFAPKIM 216
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 152 bits (369), Expect = 9e-36
Identities = 77/198 (38%), Positives = 122/198 (61%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + L+ +++ + + G+++ TPIQ + IP+A+ GKD++ ARTG+GKTA F +P++E
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
+ +PT K ++ L++ PTRELA+Q + +GK G+ S AI GG+ Q +
Sbjct: 64 I-----RPT-SKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKAL 117
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
P IVV TPGR L ++ +I+I V DEAD++ ++GF ++ ++I +LP R
Sbjct: 118 E-ELPHIVVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFIDEAEKILKKLPERR 176
Query: 744 QTLLFSATLPKMLVXFAR 797
QTLLFSATL + AR
Sbjct: 177 QTLLFSATLSPPVQMLAR 194
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 152 bits (368), Expect = 1e-35
Identities = 79/203 (38%), Positives = 127/203 (62%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F +GLS +L+ + + GY++PTP+Q IP L +D++A+A+TG+GKTA FVLP+++
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMID 61
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
L + + R+LIL PTRELA Q + GK+ L+ + ++GG + +Q
Sbjct: 62 ILAHGRCR---ARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAA 118
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ D+++ATPGR L + + L + +++V DEADR+ ++GF ++ IC +LP+S
Sbjct: 119 LE-KGVDVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLDMGFIPDIETICTKLPTS 177
Query: 741 RQTLLFSATLPKMLVXFARAGLS 809
RQTLLFSAT+P + A LS
Sbjct: 178 RQTLLFSATMPPAIKKLADRFLS 200
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 152 bits (368), Expect = 1e-35
Identities = 80/202 (39%), Positives = 121/202 (59%), Gaps = 1/202 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +GL +++G+ GY PTP+Q + IP+ L G+D+VA A+TG+GKTA F LP+L +
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVLAR 62
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQQFNV 560
L PG R L+L PTREL Q R+ G+FT + S I GG +Q+ ++
Sbjct: 63 L----GGHRPG-GPRVLVLEPTRELGAQVETAFRDFGRFTDVRSTIIHGGVGYGKQRSDL 117
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+G+ DIV+AT GR + E ++LD++++++ DE DR+ ++GF ++ I P
Sbjct: 118 RAGT--DIVIATVGRLMDFIKEKEIRLDSVEVLILDEVDRMLDMGFINDVKRIVGLCPKQ 175
Query: 741 RQTLLFSATLPKMLVXFARAGL 806
RQTL FSAT+P + AR L
Sbjct: 176 RQTLFFSATIPPEIEDVARFAL 197
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 152 bits (368), Expect = 1e-35
Identities = 83/193 (43%), Positives = 122/193 (63%), Gaps = 3/193 (1%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F +M LS P+L+ +T + PTPIQ + IP+AL G+D++ A TGSGKTA F++PILE
Sbjct: 223 SFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILE 282
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGL--TSAAILGGESIEQQF 554
+L ++ G R L+L PTRELA+Q + L + GL A ++GG S+ Q
Sbjct: 283 RLCY-RDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLDVRFALLVGGLSLNAQA 341
Query: 555 NVMSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
+ + + PDI++ATPGR + H+ L + ++V DEADR+ E GF ++L+EI
Sbjct: 342 HTLR-TLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDELEEIIKAC 400
Query: 732 PSSRQTLLFSATL 770
P SRQT+LFSAT+
Sbjct: 401 PRSRQTMLFSATM 413
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 151 bits (367), Expect = 2e-35
Identities = 84/202 (41%), Positives = 125/202 (61%), Gaps = 1/202 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
++S+ LS + K + + GY + T IQ ++IP+ L GKD++A ARTGSGKT F++PI+E
Sbjct: 83 YKSLNLSEEIQKALEEAGYTKMTTIQARSIPLLLMGKDIMAKARTGSGKTLAFLIPIVEI 142
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L + + G A+I+SPTRELA+QT + ++ + T I+GG S +++ +
Sbjct: 143 LNKIHFQTRNGTG--AIIISPTRELAIQTFDVLEKILAHSERTRTLIIGGSSKKKEEEAL 200
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
IVVATPGR L HI C N+K +V DEADR+ E+GF E++++I RLP +
Sbjct: 201 K-KGASIVVATPGRLLDHIINTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLPKN 259
Query: 741 RQTLLFSATLPKMLVXFARAGL 806
RQT+LFSAT + + A L
Sbjct: 260 RQTMLFSATQSEKVDDIANISL 281
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 151 bits (367), Expect = 2e-35
Identities = 81/202 (40%), Positives = 120/202 (59%), Gaps = 4/202 (1%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F S+GLS +++ I GY QPTP+Q++ IP L G+D++ A+TG+GKT F LPILE
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 381 KLLV---PNNKPTPG-KNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQ 548
+L P+ G + R L+L+PTRELA Q + + SA I GG +
Sbjct: 62 RLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLNFISACIFGGVGMNP 121
Query: 549 QFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR 728
Q M+ D++VA PGR L + + + L ++I+V DEADR+ ++GF ++++ AR
Sbjct: 122 QVQAMA-KGVDVLVACPGRLLDLAGQGSVDLSRVEILVLDEADRMLDMGFIHDVKKVLAR 180
Query: 729 LPSSRQTLLFSATLPKMLVXFA 794
LP+ RQ LLFSAT K + A
Sbjct: 181 LPAKRQNLLFSATFSKDITDLA 202
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 151 bits (367), Expect = 2e-35
Identities = 82/202 (40%), Positives = 119/202 (58%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F S + GI GY PTPIQ + IP AL G+DV+ +A+TG+GKTA FVLPIL+
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+L+ P +RA+I++PTRELA Q + LGK+TGL S + GG + Q
Sbjct: 62 RLM-----RGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQR 116
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ +I V PGR L L L+++ +++ DEAD++F++GF ++ I P+
Sbjct: 117 LR-RGVEIAVVCPGRLLDHLERGTLTLEHLDMLILDEADQMFDMGFLPDVRRILRLAPAQ 175
Query: 741 RQTLLFSATLPKMLVXFARAGL 806
RQT+LFSAT+P + AR L
Sbjct: 176 RQTMLFSATMPDAIRALAREAL 197
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 151 bits (367), Expect = 2e-35
Identities = 79/194 (40%), Positives = 113/194 (58%)
Frame = +3
Query: 216 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVP 395
GL P++ + RG+KQPT IQ + IP L+G+D++ A TGSGKT F++P L +L
Sbjct: 107 GLPAPLMSHLRLRGFKQPTSIQCQAIPCILSGRDIIGCAVTGSGKTLAFIIPCLLHVLA- 165
Query: 396 NNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSS 575
PT A+ILSPTRELA QT +++ SA ++GG IE Q + S
Sbjct: 166 -QPPTGQYEAAAVILSPTRELAYQTHIECQKIFSLMDKKSACLVGGNDIENQLRAIKNGS 224
Query: 576 PDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 755
++++ATPGRF+ + + + +V DEADR+F+LGF Q+ I R+ RQTL+
Sbjct: 225 -NVIIATPGRFIDLLSSSAFNIKKVSYLVIDEADRMFDLGFEPQVIRIAERMRKDRQTLM 283
Query: 756 FSATLPKMLVXFAR 797
FSAT P + AR
Sbjct: 284 FSATFPHTVERIAR 297
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 151 bits (367), Expect = 2e-35
Identities = 76/190 (40%), Positives = 119/190 (62%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ +GLS +L+ + G+++ TPIQ +TIP AL GKD++ A+TG+GKTA F LP+L+K
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
+ T ++++ ++++PTRELA+Q + ++GK + I GG+ I +Q +
Sbjct: 64 V------DTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRAL 117
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
P I+V TPGR L L+L N++ VV DEAD + +GF E ++ I +P +
Sbjct: 118 K-KHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176
Query: 744 QTLLFSATLP 773
QTLLFSAT+P
Sbjct: 177 QTLLFSATMP 186
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 151 bits (366), Expect = 2e-35
Identities = 82/198 (41%), Positives = 118/198 (59%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +GL +LK I G+++P+ IQ ++IP+AL G D++ A+TG+GKTA F I+
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
K +P +ALIL+PTRELA+Q + LGK L+ I GG+ I++Q +
Sbjct: 66 ADFSGKKKSP----KALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRAL 121
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+ DIVV TPGR L + L L++I +V DEAD + +GF + L+EI L + R
Sbjct: 122 K-NGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEADEMLNMGFIDDLEEIVKSLKTDR 180
Query: 744 QTLLFSATLPKMLVXFAR 797
QTLLFSAT+P + AR
Sbjct: 181 QTLLFSATMPPQIKKLAR 198
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 151 bits (366), Expect = 2e-35
Identities = 81/198 (40%), Positives = 115/198 (58%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
AF +GL+ + +T+ GY +PTPIQ + +P L G+DV A+TG+GKTA F LPIL
Sbjct: 134 AFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTAAFALPILH 193
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
KL + LR L+L PTRELALQ ++ K+T LT+ + GG +Q
Sbjct: 194 KL------GAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQRED 247
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ D+V ATPGR L + + L +++I+V DE DR+ ++GF ++ I + P +
Sbjct: 248 LQ-RGVDVVAATPGRLLDHIEQGTMTLADVEILVLDEVDRMLDMGFLPDVKRIVQQCPQA 306
Query: 741 RQTLLFSATLPKMLVXFA 794
RQTL FSATLP L A
Sbjct: 307 RQTLFFSATLPPELAQLA 324
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 151 bits (366), Expect = 2e-35
Identities = 86/202 (42%), Positives = 119/202 (58%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
FQ + L PV K + + YK PTPIQ +TIP AL G+DV+ A+TG+GKTA LPIL +
Sbjct: 4 FQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPILNQ 63
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L + K P L AL+L+PTRELA+Q G+ L S I GG Q +
Sbjct: 64 LGKNSRKSIPHHPL-ALVLAPTRELAIQIGDSFDAYGRHLKLRSVLIYGGVGQGNQVKAL 122
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+ I+VATPGR L + + +KL+ +++ V DEADR+ ++GF L+ I +LP+ R
Sbjct: 123 KRGA-HILVATPGRLLDLMNQGHIKLNQLEVFVLDEADRMLDMGFLPDLKRIITQLPTQR 181
Query: 744 QTLLFSATLPKMLVXFARAGLS 809
Q+L FSATL + A + LS
Sbjct: 182 QSLFFSATLAPKITELAHSLLS 203
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 151 bits (366), Expect = 2e-35
Identities = 86/200 (43%), Positives = 122/200 (61%), Gaps = 3/200 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + + V KGI + G+ Q TPIQ K +P+ALTGKDV A+TG+GKTA F++ I K
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
Query: 384 LLVPNNKPTPGK-NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
LL + T G+ + RALIL+PTREL +Q + + LGK+TG AI GG +Q +
Sbjct: 63 LL--SQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDA 120
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP-- 734
+ + DIV+ TPGR + + + +++ +V DEADR+F++GF L+ I RLP
Sbjct: 121 LKAGA-DIVIGTPGRLIDYLKQKVYSVKDVEALVIDEADRMFDMGFIADLRFILRRLPPY 179
Query: 735 SSRQTLLFSATLPKMLVXFA 794
RQ LLFSATL ++ A
Sbjct: 180 DKRQNLLFSATLNTRVMELA 199
>UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=14; Eutheria|Rep: Probable ATP-dependent RNA helicase
DDX10 - Mus musculus (Mouse)
Length = 875
Score = 151 bits (366), Expect = 2e-35
Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 1/202 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F LS LKG+ + Y+ T IQ++TI +AL GKDV+ A+TGSGKT F++P+LE
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEA 130
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L T G L LI+SPTRELA QT +R++GK ++ I+GG+ ++ + +
Sbjct: 131 LYRLQWTSTDG--LGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI 188
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
++ +I+V TPGR L H+ +C N++++V DEADR+ ++GF + + I LP
Sbjct: 189 --NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKK 246
Query: 741 RQTLLFSATLPKMLVXFARAGL 806
RQTLLFSAT K + AR L
Sbjct: 247 RQTLLFSATQTKSVKDLARLSL 268
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 151 bits (365), Expect = 3e-35
Identities = 77/190 (40%), Positives = 119/190 (62%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ +GL P+LK + G++ PTPIQ++ IP+ L G ++V A TG+GKTA ++LP+L++
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
+ GK + LI++PTRELALQ V +LGK+ + + A+ GG++IE+Q +
Sbjct: 64 I-------QRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGL 116
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+++V TPGR L IKIV+ DEAD + ++GF + ++ I L + +
Sbjct: 117 R-QGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQ 175
Query: 744 QTLLFSATLP 773
QTLLFSATLP
Sbjct: 176 QTLLFSATLP 185
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 151 bits (365), Expect = 3e-35
Identities = 82/199 (41%), Positives = 125/199 (62%), Gaps = 1/199 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIAL-TGKDVVAMARTGSGKTACFVLPILE 380
F+ GLS +L I K+GY++PT IQ+ +P AL T KD++A A+TG+GKTA F +P+LE
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLLE 79
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
++ NK ++A+I++PTRELALQ ++ L + + GG+S+E+QF
Sbjct: 80 RIDFKANK-----FVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKD 134
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ DIVV TPGR + L L +++ +V DEADR+ ++GF + + EI R +
Sbjct: 135 LE-KGVDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADRMLDMGFLDDVLEIIKRTGEN 193
Query: 741 RQTLLFSATLPKMLVXFAR 797
++T LFSAT+PK +V AR
Sbjct: 194 KRTFLFSATMPKEIVDIAR 212
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 151 bits (365), Expect = 3e-35
Identities = 81/191 (42%), Positives = 122/191 (63%), Gaps = 2/191 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
+Q +GL P+LK + + Y+ PT IQ IP AL GKD++A + TGSGKTA F++PIL+K
Sbjct: 192 WQDLGLIKPLLKAVEEMQYEFPTNIQSLAIPAALQGKDLLASSLTGSGKTAAFLIPILQK 251
Query: 384 LLVPNNKPTPGKNL-RALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+P N +ALI++PTRELA Q +L K+T L + ++G ++++Q
Sbjct: 252 FY-----RSPFTNYSKALIVTPTRELAFQIYEVFTKLNKYTKLRACLVIGQSAMQKQEAE 306
Query: 561 MSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+ G+ P++++ATPGR + H+ + LDN+++++FDEAD+L +LGF Q I
Sbjct: 307 LRGN-PEVIIATPGRLIDHLQNSRSIDLDNLEVLIFDEADKLLDLGFEAAAQNIVENCNR 365
Query: 738 SRQTLLFSATL 770
RQTLLFSATL
Sbjct: 366 ERQTLLFSATL 376
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 150 bits (363), Expect = 5e-35
Identities = 81/206 (39%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ +GL VLK + GYK+PT IQ +IP+AL KD++ +A+TGSGKTA F+LP+++
Sbjct: 11 FKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVALQKKDIIGIAQTGSGKTASFLLPMVQH 70
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQQFNV 560
LL N + +I+ PTRELA Q + + E+GK GLTS ++GG + +Q +V
Sbjct: 71 LL---NVKEKNRGFYCIIIEPTRELAAQVVEVIDEMGKALPGLTSCLLVGGMDVMKQ-SV 126
Query: 561 MSGSSPDIVVATPGRFL-HICIEMCLK--LDNIKIVVFDEADRLFELGFGEQLQEICARL 731
P ++V TPGR + HI ++ ++ +K +V DEAD+L E+ F ++ + +L
Sbjct: 127 QLAKRPQVIVGTPGRIVYHIKNTKGVEESIEKVKFLVIDEADKLLEMDFANEIDYLIEKL 186
Query: 732 PSSRQTLLFSATLPKMLVXFARAGLS 809
P R T+LFSAT+ + RA L+
Sbjct: 187 PKQRTTMLFSATMSTKVEKLQRASLT 212
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 150 bits (363), Expect = 5e-35
Identities = 80/197 (40%), Positives = 114/197 (57%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + L P+ + + GY+ PTPIQ IP+ L G D++ +A+TG+GKTA F LPIL+
Sbjct: 6 FTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQN 65
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L K P K+ R LIL+PTRELA+Q + K + A I GG Q +
Sbjct: 66 LSKHTRKIEP-KSPRCLILTPTRELAIQIHENIEAYSKHLNMKHAVIFGGVGQNPQVRAL 124
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
G DI++ATPGR + + + LKLD ++I V DEADR+ ++GF + +++I LP R
Sbjct: 125 QGGV-DILIATPGRLMDLHGQKHLKLDRVEIFVLDEADRMLDMGFMQDIKKILPLLPQKR 183
Query: 744 QTLLFSATLPKMLVXFA 794
L FSAT+P + A
Sbjct: 184 HNLFFSATMPHEIQTLA 200
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 150 bits (363), Expect = 5e-35
Identities = 84/203 (41%), Positives = 125/203 (61%), Gaps = 1/203 (0%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
S F ++ LS +L + + G++ TPIQ+++IP+ L GKD++ A+TGSGKTA F LP
Sbjct: 45 SQNEFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLP 104
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELG-KFTGLTSAAILGGESIEQ 548
IL K+ N P L+ALIL PTRELA Q + +R+LG + GL A+ GG+S +
Sbjct: 105 ILNKI----NLDQP--LLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGRE 158
Query: 549 QFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR 728
Q + + + IVV TPGR + L +K VV DEAD++ ++GF ++++ +
Sbjct: 159 QADALE-NGVQIVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKMLDMGFADEIKTVMRD 217
Query: 729 LPSSRQTLLFSATLPKMLVXFAR 797
LP SRQT+LFSAT P+ + +R
Sbjct: 218 LPGSRQTVLFSATFPESIEHLSR 240
>UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Saccharophagus degradans (strain 2-40 / ATCC
43961 / DSM 17024)
Length = 436
Score = 150 bits (363), Expect = 5e-35
Identities = 78/189 (41%), Positives = 115/189 (60%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +GL + K + K + +PT +Q +TIP L GKD++ A+TGSGKTA F+LP+L K
Sbjct: 3 FSELGLHQSLQKALDKLTFTKPTDVQVQTIPAVLAGKDIMVSAKTGSGKTAAFLLPMLHK 62
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L N P P + RALIL PTRELALQT++ + +T + I+GGE+ + Q +
Sbjct: 63 FL---NDPRPNTSTRALILLPTRELALQTVKAFEQFAGYTQIKVGLIMGGEAYKHQVATV 119
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+P+++VATPGR + + +++ +V DE+DR+ ++GF E + I A R
Sbjct: 120 R-KNPEVLVATPGRLVEHIKNGNVDFSDLEFLVLDESDRMLDMGFQENMLAIAAVCNEER 178
Query: 744 QTLLFSATL 770
Q LLFSATL
Sbjct: 179 QNLLFSATL 187
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 150 bits (363), Expect = 5e-35
Identities = 76/190 (40%), Positives = 123/190 (64%), Gaps = 1/190 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+S L+ + K + + G+ +PT IQ K+IP L G+DV+A+A+TG+GKTA FV+P+L
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNT 62
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L+ N K + ++ L+++PTRELA+Q +++G +T L + I GG +EQ+ +
Sbjct: 63 LI--NVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTRLRTVCITGG--VEQEAQIA 118
Query: 564 SGS-SPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ DI+VATPGR + + +K+ +KI+V DEAD + +LGF + +Q++ LP+
Sbjct: 119 AADYGIDILVATPGRMFDLIYQKHIKITRVKILVLDEADHMLDLGFIKDIQDVKKFLPAR 178
Query: 741 RQTLLFSATL 770
QTL FSAT+
Sbjct: 179 HQTLFFSATI 188
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 150 bits (363), Expect = 5e-35
Identities = 74/193 (38%), Positives = 120/193 (62%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + L+ + K I + + +PT +Q KTIP+ L K+V+ A+TG+GKTA F LPI+
Sbjct: 3 FSDIPLNKSIQKAIAEARFHKPTLVQEKTIPLVLDKKNVIVAAQTGTGKTAAFALPIINL 62
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L + K ++AL+++PTRELA+Q L + K++ L S A+ GG S+E Q ++
Sbjct: 63 LFDKQDAEKGEKKIKALVITPTRELAIQILENFKSYSKYSNLRSTAVFGGVSLEPQKEIL 122
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+ DI+VATPGR + + ++ + L ++I V DEAD + ++GF +++I P +
Sbjct: 123 A-KGVDILVATPGRLIDLQMQGNIDLSQLEIFVLDEADLMLDMGFINDIKKIEKLCPRKK 181
Query: 744 QTLLFSATLPKML 782
QTLLFSAT+P+ +
Sbjct: 182 QTLLFSATIPEKI 194
>UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 449
Score = 150 bits (363), Expect = 5e-35
Identities = 81/199 (40%), Positives = 121/199 (60%), Gaps = 1/199 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F + L+ P+++ + + + PT +Q +TIP L+G+D+ A A TGSGK+ F++PI++
Sbjct: 8 SFLDLKLAKPIIRALNENNFTNPTKVQAETIPKILSGQDICATAITGSGKSMAFLIPIVQ 67
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
KLL P P +ALI+SPTRELA Q L +TS ++GG S E+Q +
Sbjct: 68 KLLTFRGLPGP----KALIMSPTRELAQQLKAVCDMLAAHCAITSTLVIGGVSDEEQREL 123
Query: 561 MSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
++ +PDI++ TPGRF+ I LKL++++ V DEADRL GF QL I ++LP
Sbjct: 124 LT-PAPDIIIGTPGRFIDSIFNAKVLKLEHLQFFVLDEADRLLGKGFESQLNTIVSQLPE 182
Query: 738 SRQTLLFSATLPKMLVXFA 794
QTLLF+ATL + A
Sbjct: 183 KHQTLLFTATLNDQVAKLA 201
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 149 bits (362), Expect = 6e-35
Identities = 80/193 (41%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
S+ +F + L + + GY+QPTPIQ + IP+ L G D++A A+TG+GKTA F LP
Sbjct: 2 SASSFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALP 61
Query: 372 ILEKLLVPNNKPTPG-KNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQ 548
I+EKL + P G + +RAL+L+PTRELA+Q E G+ G+ ++ GG +E
Sbjct: 62 IIEKL---SKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVEN 118
Query: 549 QFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR 728
Q + + DI+VATPGR L + + + L+ ++ +V DEADR+ +LGF + +Q+I
Sbjct: 119 QIKRLKRGT-DILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLDLGFIDPIQKIMDY 177
Query: 729 LPSSRQTLLFSAT 767
RQTLLF+AT
Sbjct: 178 AADDRQTLLFTAT 190
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 149 bits (361), Expect = 8e-35
Identities = 80/202 (39%), Positives = 117/202 (57%), Gaps = 1/202 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +GLS V++ +TK GY+ P+PIQ TIP L G+DV+ A+TG+GKTA F LP+L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLR-FVRELGKFTGLTSAAILGGESIEQQFNV 560
++ KP + L+L+PTRELA+Q F R +G + GG+S QQ
Sbjct: 77 TVLNQVKP------QVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAA 130
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ ++V TPGR + L L +K +V DEAD + +GF E ++E+ +LP+S
Sbjct: 131 LK-RGVHVIVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLPAS 189
Query: 741 RQTLLFSATLPKMLVXFARAGL 806
RQ LFSAT+P + A+ L
Sbjct: 190 RQVALFSATMPPQIRRIAQTYL 211
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 149 bits (361), Expect = 8e-35
Identities = 82/198 (41%), Positives = 120/198 (60%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F S+ L +LK + + G+ +PTPIQ IP A++G+DV+A A TGSGKTA F+LPIL +
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L+ P RAL+++PTRELA Q L + +L T +++AA+ GG SI Q +
Sbjct: 63 LI-----DRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAF 117
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
D+++ TPGR L KL ++ +V DEADR+ ++GF ++ I +P+ R
Sbjct: 118 R-RGVDVLIGTPGRLLDHFRAPYAKLAGLEHLVLDEADRMLDMGFLPDIRRILKHIPARR 176
Query: 744 QTLLFSATLPKMLVXFAR 797
QTL FSAT+P + AR
Sbjct: 177 QTLFFSATMPAPIGVLAR 194
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 149 bits (361), Expect = 8e-35
Identities = 86/196 (43%), Positives = 120/196 (61%), Gaps = 4/196 (2%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F ++GLS +LK + K+ Y P PIQ + IP L GKD++ +A+TGSGKTA FVLPIL+
Sbjct: 10 SFATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQ 69
Query: 381 KLLVPNNKPTPGKN--LRALILSPTRELALQTLRFVRELGKF--TGLTSAAILGGESIEQ 548
L KP GKN + AL+L PTRELA+Q + + + S A+ GG SI
Sbjct: 70 ML---QTKPL-GKNRHINALVLVPTRELAVQVGQVFQAFSNALPNKIKSLAVYGGVSINP 125
Query: 549 QFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR 728
Q + G +I++ATPGR L + + L +++++V DEAD++ LGF E++ I
Sbjct: 126 QMIQLQG--VEILIATPGRLLDLVDSKAVYLSDVEVLVLDEADKMLNLGFKEEMANIFKL 183
Query: 729 LPSSRQTLLFSATLPK 776
LP RQ LLFSATL K
Sbjct: 184 LPQKRQNLLFSATLGK 199
>UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Pseudomonas putida W619
Length = 621
Score = 149 bits (361), Expect = 8e-35
Identities = 76/191 (39%), Positives = 115/191 (60%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
+ F L +LK + + + +PTP+Q IP+AL G+D+ A+TGSGKTA FVLP+
Sbjct: 181 TSVFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPL 240
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
L +L+ +RALIL PTRELA QTL+ V+ +FT + + + GGE ++Q
Sbjct: 241 LNRLVDLKGARV---EIRALILLPTRELAQQTLKQVQLFSQFTYIKAGLVTGGEDFKEQA 297
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
M PD+++ TPGR L L L ++++++ DEADR+ ++GF E ++ +C
Sbjct: 298 -AMLRKVPDVLIGTPGRLLEQLNAGNLDLSHVQVMILDEADRMLDMGFAEDMERLCKECE 356
Query: 735 SSRQTLLFSAT 767
+ QTLLFSAT
Sbjct: 357 NREQTLLFSAT 367
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 149 bits (361), Expect = 8e-35
Identities = 81/203 (39%), Positives = 126/203 (62%), Gaps = 1/203 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ + +S P LKG+ + + + T IQ +IP++L G DV+A A+TGSGKT F++P++EK
Sbjct: 43 FKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEK 102
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L K T L ALI+SPTRELA+Q + ++G T ++ ++GG+ + +F +
Sbjct: 103 LY--REKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIGGKDV--KFELE 158
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
S +I++ TPGR L H+ + L N++++V DEADR ++GF + L I + L S
Sbjct: 159 RISRINILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLSPS 218
Query: 741 RQTLLFSATLPKMLVXFARAGLS 809
RQTLLFSAT + + AR L+
Sbjct: 219 RQTLLFSATQSQSVADLARLSLT 241
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 149 bits (360), Expect = 1e-34
Identities = 79/202 (39%), Positives = 122/202 (60%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F++ L ++ + +GYKQPTPIQ++ IP + G D++ +A+TG+GKTA F LPI+ K
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
N K+ R+LIL+PTRELA Q ++ + + GL + + GG + Q + +
Sbjct: 64 F-GRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSI 122
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
DI+VATPGR L + + +++ V DEAD + ++GF + +Q I ++LP SR
Sbjct: 123 E-LGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSR 181
Query: 744 QTLLFSATLPKMLVXFARAGLS 809
QTLLFSAT+P + A A L+
Sbjct: 182 QTLLFSATMPAEIEILAEAILT 203
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 148 bits (359), Expect = 1e-34
Identities = 79/190 (41%), Positives = 116/190 (61%), Gaps = 1/190 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + LS + I + G+++ +PIQ + IP+ L GKD++ A+TG+GKTA F +P +E
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG-LTSAAILGGESIEQQFNV 560
L V + K+L+ALIL PTREL +Q R+L K+ G I GG+ IE+Q
Sbjct: 71 LEVES------KHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRA 124
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ +P IV+ATPGR + + LD IKIVV DEAD + ++GF E ++ I P+
Sbjct: 125 LR-KNPQIVIATPGRMMDHMRRGSIHLDEIKIVVLDEADEMLDMGFREDMEFILKDTPAD 183
Query: 741 RQTLLFSATL 770
RQT++FSAT+
Sbjct: 184 RQTIMFSATM 193
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 148 bits (359), Expect = 1e-34
Identities = 83/206 (40%), Positives = 118/206 (57%), Gaps = 1/206 (0%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
SS F S+GL F +L+ I ++GY+QP+PIQ ++IP L GKDV+ +A+TG+GKTA F LP
Sbjct: 4 SSTGFASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLP 63
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQ 548
+L + +P + L+L+PTRELA Q V K + + A+I GG
Sbjct: 64 LLARTQNEVREP------QVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGS 117
Query: 549 QFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR 728
QF + P VV TPGR + LKL+ I+ VV DEAD + +GF + + + +
Sbjct: 118 QFRALK-QGPQWVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQ 176
Query: 729 LPSSRQTLLFSATLPKMLVXFARAGL 806
+P RQ LFSAT+PK + A L
Sbjct: 177 VPEKRQIALFSATMPKQIKAVAEKHL 202
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 148 bits (359), Expect = 1e-34
Identities = 77/191 (40%), Positives = 115/191 (60%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F+S V+ G+ GYK+PTPIQ + IP + G DV+ +A+TG+GKTA + LPI++
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
K+L TP +R L+++PTRELA Q R LG+ + +I GG +++QQ
Sbjct: 62 KML-----STPRGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRR 116
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ S D+VVA PGR L + + ++ ++ DEADR+F++GF +Q I L
Sbjct: 117 LR-SGVDVVVACPGRLLDHIWRGTIDVCGVETLIIDEADRMFDMGFQPDIQSILKCLVQP 175
Query: 741 RQTLLFSATLP 773
QTLLFSAT+P
Sbjct: 176 HQTLLFSATMP 186
>UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05414 protein - Schistosoma
japonicum (Blood fluke)
Length = 325
Score = 148 bits (359), Expect = 1e-34
Identities = 92/246 (37%), Positives = 136/246 (55%), Gaps = 2/246 (0%)
Frame = +3
Query: 75 IKLIKMLKPKELDDHLPGFDAPKADXXXXXXXXXXXXXXSSGAFQSMGLSFPVLKGITKR 254
+K +K ++ K +D G D SG F+ + +S PV + I
Sbjct: 12 MKRLKKIRQKHTEDKKEGDDVASDSIKESQPGTSIIL---SGKFEDLPISEPVKRAIKDM 68
Query: 255 GYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRAL 434
G+ T IQ K IP L +D++A A+TGSGKT F++P++E +L +P G A+
Sbjct: 69 GFTHMTDIQNKCIPQLLEHRDIMACAKTGSGKTLAFLIPVVELMLSLGLQPRNGTG--AI 126
Query: 435 ILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF-NVMSGSSPDIVVATPGRFL 611
I+SPTREL+LQT + EL +FT L I+GG + + + N+ G + I+VATPGR L
Sbjct: 127 IISPTRELSLQTYGVLTELIQFTNLRIGLIMGGSNRQTEAQNLEKGVT--ILVATPGRLL 184
Query: 612 -HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFSATLPKMLVX 788
H+ N+K +V DEADRL ++GF ++++I LP+ RQT+LFSATL +
Sbjct: 185 DHLTNTKFFLRHNLKALVIDEADRLLDIGFEVEMRQIIKLLPTVRQTMLFSATLNEKTKN 244
Query: 789 FARAGL 806
A A L
Sbjct: 245 LANAAL 250
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 148 bits (359), Expect = 1e-34
Identities = 77/198 (38%), Positives = 116/198 (58%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ L +++ I GY +PT +Q IPIAL G D+V ++TGSGKTA +++PI+
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPII-- 61
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
N K +RALIL PTRELA+Q + LGK +G+ + + GG SI +Q ++
Sbjct: 62 -----NNTAKEKGIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELI 116
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+ +I+V TPGR L + L D + V DEAD + ++GF E +++I LP R
Sbjct: 117 LRGA-NIIVGTPGRTLDLIDRGILNFDKVSYFVLDEADEMLDMGFIEDIKKIINVLPVER 175
Query: 744 QTLLFSATLPKMLVXFAR 797
Q+ LFSAT+P ++ A+
Sbjct: 176 QSFLFSATIPSEIIELAK 193
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 148 bits (358), Expect = 2e-34
Identities = 77/191 (40%), Positives = 117/191 (61%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
+ F +GL + +++ G+ PTPIQ++ IP L G+DV+A A+TG+GKTA + LP+
Sbjct: 2 TNTFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPL 61
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
++ L + + T K+ RALIL+PTRELA Q +++ + T L + GG SI Q
Sbjct: 62 IQMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQQ 121
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
++ DI++ATPGR L L+ ++++V DEADR+ ++GF +Q I R+P
Sbjct: 122 EQLA-KGVDILIATPGRLLDHLFTKKTSLNQLQMLVLDEADRMLDMGFLPDIQRIMKRMP 180
Query: 735 SSRQTLLFSAT 767
RQTLLFSAT
Sbjct: 181 EERQTLLFSAT 191
>UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase;
n=1; Desulfotalea psychrophila|Rep: Related to
ATP-dependent RNA helicase - Desulfotalea psychrophila
Length = 498
Score = 148 bits (358), Expect = 2e-34
Identities = 71/191 (37%), Positives = 116/191 (60%), Gaps = 2/191 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + P++ GI ++ TPIQ +++ L GKD++ A TG+GKTA F++ ++ +
Sbjct: 96 FHDFAIPLPLMHGIADLKFEYCTPIQEQSLEAVLAGKDLIGKANTGTGKTAVFLVGVMAR 155
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
LL + RALIL+PTREL +Q ++ ++LG++TG+ + A+ GG E+Q ++
Sbjct: 156 LLADKKGGLGKRTPRALILAPTRELVMQIVKDAKKLGRYTGVNADAVYGGAEYEKQMELL 215
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS-- 737
DIVVATPGR + + + DN + +V DEADR+ ++GF ++ I + +P
Sbjct: 216 KRGKTDIVVATPGRLIDFHNKRLVNFDNCQTLVIDEADRMLDMGFIPDVRRIVSWMPKKR 275
Query: 738 SRQTLLFSATL 770
RQTL+FSAT+
Sbjct: 276 DRQTLMFSATI 286
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 148 bits (358), Expect = 2e-34
Identities = 74/203 (36%), Positives = 116/203 (57%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
S+ AF + L+ +L+ + + GY +PTPIQ ++IP+ L G+D++ +A+TG+GKTA F LP
Sbjct: 5 SAQAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALP 64
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 551
+L + L +P P R L+L+PTREL Q + + I GG S Q
Sbjct: 65 LLHR-LAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQVHQ 123
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
+ DI+VA PGR L + + L ++ +V DEAD++ ++GF + ++ I A L
Sbjct: 124 VKALE-EGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLDMGFAKPIERIVATL 182
Query: 732 PSSRQTLLFSATLPKMLVXFARA 800
P R T+LFSAT+PK + +
Sbjct: 183 PEDRHTVLFSATMPKSIAALVES 205
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 148 bits (358), Expect = 2e-34
Identities = 82/197 (41%), Positives = 119/197 (60%), Gaps = 3/197 (1%)
Frame = +3
Query: 216 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVP 395
GL+ V + K Y++PT IQ +TIP + G+D++ +ARTGSGKT F+LP+ +L
Sbjct: 515 GLTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILA- 573
Query: 396 NNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSS 575
K PG+ + ALI+SPTRELALQ ++ K GL +A + GG SI +Q + +
Sbjct: 574 QPKSAPGEGMIALIMSPTRELALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGA 633
Query: 576 PDIVVATPGRFLHICIEMCLKLDNIKIVVF---DEADRLFELGFGEQLQEICARLPSSRQ 746
DIVV TPGR + I ++ N++ V F DEADR+F++GFG Q+ I + RQ
Sbjct: 634 -DIVVCTPGRMIDILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSIRPDRQ 692
Query: 747 TLLFSATLPKMLVXFAR 797
T++FSAT P + A+
Sbjct: 693 TIMFSATFPPKVENVAK 709
>UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 564
Score = 148 bits (358), Expect = 2e-34
Identities = 80/190 (42%), Positives = 118/190 (62%), Gaps = 1/190 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + L+ ++K +GY PT +Q K IPI + GKDV+A + TGSGKTA F+LPI+++
Sbjct: 118 FHQLKLNKALVKACHDQGYTHPTNVQAKIIPIIMNGKDVLASSCTGSGKTAAFLLPIMQR 177
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
N + +ALI+ PTRELALQ +L K+ T+A ++G I+QQ +
Sbjct: 178 FGNLKNL----QYSKALIILPTRELALQCFEMFEKLNKYANCTAALVIGAVPIQQQETEL 233
Query: 564 SGSSPDIVVATPGRFLHICI-EMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
PDI++ATPGR + + L++ NI+I+VFDEADRL E+GF +++++I
Sbjct: 234 R-KYPDIIIATPGRTVDLLTNSSSLEIQNIEILVFDEADRLMEMGFEKEIRQILQATSKD 292
Query: 741 RQTLLFSATL 770
RQT+L SATL
Sbjct: 293 RQTVLISATL 302
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 148 bits (358), Expect = 2e-34
Identities = 79/200 (39%), Positives = 121/200 (60%), Gaps = 1/200 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGK-DVVAMARTGSGKTACFVLPIL 377
+F+++GLS +L+ + K+G+ PTPIQ + IPI + GK D+V A+TG+GKTA F +PIL
Sbjct: 3 SFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
Query: 378 EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
E + +N +ALIL+PTRELA+Q + + L + GG+SI++Q
Sbjct: 63 ETI------DESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIR 116
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+ IVV TPGR L +KL+N+ VV DEAD + +GF + ++EI + +
Sbjct: 117 ELR-RGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVST 175
Query: 738 SRQTLLFSATLPKMLVXFAR 797
++ LLFSATLP ++ A+
Sbjct: 176 EKRMLLFSATLPDSIMKLAK 195
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 147 bits (356), Expect = 3e-34
Identities = 86/199 (43%), Positives = 120/199 (60%), Gaps = 1/199 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ +GL P+L + + G+K+P+ IQ + IP L GKDV+ ++TGSGKTA FVLP+L+K
Sbjct: 22 FEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEGKDVLVGSQTGSGKTAAFVLPMLQK 81
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L P PG RALIL PTRELA QT R+LG+ L + I GG S EQQ +
Sbjct: 82 LTEAG--PAPGP--RALILEPTRELAAQTAAVCRQLGRRLSLKTRVICGGTSREQQVQSV 137
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS- 740
S DI+VAT GR L + ++ L L+++ +V DEADRL + F + + P
Sbjct: 138 S-DGVDIIVATHGRLLDLVMQADLVLEHLTYLVLDEADRLLDEDFSASMTALTPYFPDQP 196
Query: 741 RQTLLFSATLPKMLVXFAR 797
QT+ SATLP+ ++ A+
Sbjct: 197 PQTVFCSATLPEPVMDLAK 215
>UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 411
Score = 147 bits (356), Expect = 3e-34
Identities = 81/200 (40%), Positives = 117/200 (58%), Gaps = 3/200 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +GLS +L+ + + G+ +PTPIQ + IP+ L D++A A+TGSGK+A F+LPILE
Sbjct: 3 FSKLGLSQNILQALKQNGFTKPTPIQERVIPLVLERHDIMAKAQTGSGKSASFILPILE- 61
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTS--AAILGGESI-EQQF 554
L+ + ++ L+L+PTREL Q + G F ++GGE I EQ F
Sbjct: 62 -LLSRDSYEGKAKIKVLVLTPTRELTQQIVEAFNTFGAFMSKKPKVVGVIGGEGIGEQLF 120
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
N+ G DI+VAT GRFL I + + L ++ V DEAD++ + GF E+L+ I L
Sbjct: 121 NIQKGC--DILVATSGRFLDILSKKQMILSHVDFFVLDEADKMLDFGFAEELELILEALG 178
Query: 735 SSRQTLLFSATLPKMLVXFA 794
RQ LLFSAT P ++ A
Sbjct: 179 QKRQNLLFSATYPPKMLFIA 198
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 147 bits (356), Expect = 3e-34
Identities = 79/189 (41%), Positives = 116/189 (61%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ + L+ +L I + GY +PT IQ K IP L G D++ +A+TG+GKTA + LPIL K
Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALPILMK 66
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
+ K G N RA+I PTREL +Q +++L K+T L A+ GG + Q +
Sbjct: 67 I-----KYAQGHNPRAVIFGPTRELVMQIEIAMKQLAKYTDLRIVALYGGIGPKLQKEHL 121
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
DI+VATPGRFL + +E + L +K +V DEAD++ ++GF QL+++ +P R
Sbjct: 122 Q-KGVDIIVATPGRFLDLYLEEEIVLKEVKTMVLDEADKMMDMGFMPQLRKMLEVIPRKR 180
Query: 744 QTLLFSATL 770
Q LLFSAT+
Sbjct: 181 QNLLFSATM 189
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 147 bits (356), Expect = 3e-34
Identities = 79/198 (39%), Positives = 118/198 (59%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
+ M LS + + Y QP+PIQ IP+AL G+DV+ ARTG+GKTA F +PI+E+
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L + P +N +ALIL+PTRELA+Q + +L + A+ GG+ + Q +
Sbjct: 66 L---EHGPN-SRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKL 121
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+P IVV TPGR + + L+L+ ++ VV DEADR+ ++GF +++I R P R
Sbjct: 122 K-RAPHIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADRMLDIGFRPDIEKILRRCPEER 180
Query: 744 QTLLFSATLPKMLVXFAR 797
QTLL SAT+P + A+
Sbjct: 181 QTLLLSATVPPTIEKLAQ 198
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 147 bits (356), Expect = 3e-34
Identities = 82/203 (40%), Positives = 121/203 (59%), Gaps = 1/203 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ G S ++ I K+ Y++PT IQ + +PI L+G+DV+ +A+TGSGKTA FVLP++
Sbjct: 230 FEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVH 289
Query: 384 LL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
++ P + G +I +PTRELA Q ++ K GL +A+ GG S +QF
Sbjct: 290 IMDQPELQRDEGP--IGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKE 347
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ +IVVATPGR + + L + +V DEADR+F+LGF Q++ I ++
Sbjct: 348 LKAGC-EIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPD 406
Query: 741 RQTLLFSATLPKMLVXFARAGLS 809
RQTLLFSAT+P + AR LS
Sbjct: 407 RQTLLFSATMPWKVEKLAREILS 429
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 147 bits (355), Expect = 4e-34
Identities = 76/195 (38%), Positives = 120/195 (61%), Gaps = 2/195 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ +G+S ++ + G+K+PTPIQ+ +IP AL G D++ A+TG+GKT F +P++EK
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 384 LLVPNNKPTPGK-NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
++ GK +++LIL+PTRELA+Q +RE + G+ + GG IE+Q
Sbjct: 64 VV--------GKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKA 115
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS- 737
+ P IVV TPGR + LK D I ++ DEAD + +GF + ++ I ++P+
Sbjct: 116 LK-KGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAV 174
Query: 738 SRQTLLFSATLPKML 782
RQT+LFSAT+PK +
Sbjct: 175 QRQTMLFSATMPKAI 189
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 146 bits (354), Expect = 6e-34
Identities = 73/198 (36%), Positives = 120/198 (60%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + + + K I + G+++P+PIQ K IP L G DV+ A+TG+GKTA F +P++EK
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVEK 67
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
+ + G++++ALIL+PTRELA+Q +++L K + + I GG+SI Q +
Sbjct: 68 V-------STGRHVQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKAL 120
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+V+ TPGR + L LD++ V+ DEAD + ++GF + ++ I ++ + R
Sbjct: 121 K-QGVQVVIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLDMGFIDDIESILRQVKNER 179
Query: 744 QTLLFSATLPKMLVXFAR 797
QTLLFSAT+P + +R
Sbjct: 180 QTLLFSATMPPAIKKLSR 197
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 146 bits (354), Expect = 6e-34
Identities = 79/201 (39%), Positives = 113/201 (56%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + L +L+ + GY++PTPIQR+ +P + G+D++ A TG+GKTA F LP+L +
Sbjct: 59 FAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAAFALPLLHR 118
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L + T +AL+L PTRELA+Q + G+ G + GG I +Q +
Sbjct: 119 L---TDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGRQVRAL 175
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
D+VVATPGR L L+LD + VV DEAD + ++GF E + I + P R
Sbjct: 176 V-QGVDVVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLDMGFAEDIDAILEQAPQKR 234
Query: 744 QTLLFSATLPKMLVXFARAGL 806
QT+LFSATLP + AR L
Sbjct: 235 QTVLFSATLPPRMDQIARRHL 255
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 146 bits (354), Expect = 6e-34
Identities = 81/199 (40%), Positives = 119/199 (59%), Gaps = 1/199 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKD-VVAMARTGSGKTACFVLPILE 380
FQ MGLS +L I ++GY+ PTPIQ K IP+ L+GK+ V+ A+TG+GKTA F +P++E
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+L N +++AL+L+PTRELALQ + L L + GG SI Q
Sbjct: 64 RLDEKAN------DVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRA 117
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ D+VV TPGR + L + IK +V DEAD + ++GF E ++ I ++
Sbjct: 118 LK-RRVDLVVGTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIEDVEMILSKTNKE 176
Query: 741 RQTLLFSATLPKMLVXFAR 797
+Q L+FSAT+P+ +V AR
Sbjct: 177 KQILMFSATMPQRIVTLAR 195
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 146 bits (354), Expect = 6e-34
Identities = 84/203 (41%), Positives = 122/203 (60%), Gaps = 2/203 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +S L G+ K G+ PT IQ++ IP+AL+G+DV+ A+TGSGKT F++PI+E
Sbjct: 52 FSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPIIET 111
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIE-QQFNV 560
L K T L AL++SPTRELA QT + ++G L++ I+GG+ ++ +Q +
Sbjct: 112 LW--RQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRI 169
Query: 561 MSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
M +IVV TPGR L H+ +++I+V DEADR+ ++GF L I LPS
Sbjct: 170 M---KTNIVVCTPGRLLQHMDETPNFDCTSLQILVLDEADRILDMGFAPTLNAIIENLPS 226
Query: 738 SRQTLLFSATLPKMLVXFARAGL 806
RQTLL+SAT + + AR L
Sbjct: 227 ERQTLLYSATQTRSVKDLARLSL 249
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 146 bits (353), Expect = 8e-34
Identities = 81/199 (40%), Positives = 117/199 (58%), Gaps = 1/199 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F MGL + + + K + PTP+Q + IP+AL GKD++ A+TG+GKT F +P++
Sbjct: 3 SFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLIA 62
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELG-KFTGLTSAAILGGESIEQQFN 557
KLL N T AL++ PTRELA Q + +L K + L A ++GGE I +Q N
Sbjct: 63 KLLGEPNAST------ALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGGEPIFRQLN 116
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+ P IV+ TPGR + L +N+ +V DE DR+F++GFG Q++ I LP
Sbjct: 117 QLQ-RRPRIVIGTPGRIIDHIERKTLITNNVSTLVLDEVDRMFDMGFGIQIEGIMKYLPK 175
Query: 738 SRQTLLFSATLPKMLVXFA 794
RQ L+FSATLP +V A
Sbjct: 176 MRQNLMFSATLPGDIVKLA 194
>UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2;
Gammaproteobacteria|Rep: ATP-dependent rna helicase Rhl
- Dichelobacter nodosus (strain VCS1703A)
Length = 432
Score = 146 bits (353), Expect = 8e-34
Identities = 75/199 (37%), Positives = 122/199 (61%), Gaps = 2/199 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + +L+ + + + TPIQ +T+P+ L G DV+ +A+TG+GKTA F+L ++
Sbjct: 11 FTDFPIHSALLEALEDIHFTKTTPIQAQTLPLTLAGYDVMGIAQTGTGKTAAFLLSLMHY 70
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L+ P K A++L+PTRELA+Q + + LG +TGL S AI GG SIE Q +
Sbjct: 71 LMTNPVHPK-AKGPWAIVLAPTRELAIQIKKEMDLLGAYTGLVSLAIYGGTSIEHQKKLF 129
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS- 740
+ D+++ TPGR + + + +L NI++ V DEADR+F+LGF + ++ + ++P +
Sbjct: 130 QACNVDVIIGTPGRIIDLFKQKVFRLKNIEVCVLDEADRMFDLGFIDDVRYLLRQMPPAY 189
Query: 741 -RQTLLFSATLPKMLVXFA 794
R LLFSAT+P+ + A
Sbjct: 190 ERLNLLFSATMPQKVQELA 208
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 145 bits (352), Expect = 1e-33
Identities = 80/203 (39%), Positives = 119/203 (58%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+FQ+ L +LK I + GY QPTPIQ K+IP + K V+A A+TG+GKTA FVLPIL+
Sbjct: 2 SFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPILD 61
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
KL + G+ R LI+SPTRELA Q +++ ++ + S I GG S Q N
Sbjct: 62 KL---TKNRSEGRGPRVLIVSPTRELATQITDSIKKYSRYLRINSITITGGISYGLQ-NR 117
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
M DI+VATPGR L + + + +++++ DEADR+ ++GF +++I
Sbjct: 118 MFSKPIDILVATPGRLLDLYQQKKINFKGLEVMILDEADRMLDMGFVPDIRKIYNATSKK 177
Query: 741 RQTLLFSATLPKMLVXFARAGLS 809
+Q L+FSAT + A+ L+
Sbjct: 178 QQMLMFSATFDPPIQKIAQEFLT 200
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 145 bits (352), Expect = 1e-33
Identities = 80/199 (40%), Positives = 118/199 (59%), Gaps = 1/199 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +G+S + + G + TPIQ K IP+ L+GKD++ A+TG+GKT FVLPILEK
Sbjct: 7 FLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEK 66
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQ-TLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+ +++ALI++PTRELALQ T + L + + AI GG+ + QQ
Sbjct: 67 I------DPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRK 120
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ G++ IVVATPGR L + L N+ +V DEAD++ GF +++I P S
Sbjct: 121 LKGNT-HIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGS 179
Query: 741 RQTLLFSATLPKMLVXFAR 797
+QT+LFSAT+PK + A+
Sbjct: 180 KQTMLFSATIPKDIKKLAK 198
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 145 bits (352), Expect = 1e-33
Identities = 78/199 (39%), Positives = 116/199 (58%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F G ++ I K Y QPTPIQ + +P+AL+G+D++ +A+TGSGKTA F+ P+L
Sbjct: 254 SFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLI 313
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
++ + PG A+I+ PTREL Q + GK L S A+ GG S+ +Q
Sbjct: 314 HIM-DQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKA 372
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ + +IVV TPGR + + L + +VFDEADR+F++GF Q++ I + +
Sbjct: 373 LQEGA-EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPD 431
Query: 741 RQTLLFSATLPKMLVXFAR 797
RQTLLFSAT K + AR
Sbjct: 432 RQTLLFSATFRKKIEKLAR 450
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 144 bits (350), Expect = 2e-33
Identities = 82/233 (35%), Positives = 124/233 (53%), Gaps = 5/233 (2%)
Frame = +3
Query: 123 PGFDAPKADXXXXXXXXXXXXXXSSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIA 302
PG D P + S F +G+ + + + G P PIQ +IPIA
Sbjct: 31 PGLDGPTHEEAKTLTETTVSVPTS---FADLGVREDICQALEGVGIVSPFPIQAMSIPIA 87
Query: 303 LTGKDVVAMARTGSGKTACFVLPILEKLLVPNNK-----PTPGKNLRALILSPTRELALQ 467
+ G D++ ARTG+GKT F + IL ++ +P ++ T GK +AL++ PTRELALQ
Sbjct: 88 VEGTDLIGQARTGTGKTLAFGITILLRITLPGDEGWEELTTKGKP-QALVMCPTRELALQ 146
Query: 468 TLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDN 647
+ + G + GG E Q + + + D+VV TPGR L + L L +
Sbjct: 147 VSKDISTAASVRGARVLTVYGGVGYESQIDALK-AGVDVVVGTPGRLLDLSQRKDLDLSH 205
Query: 648 IKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFSATLPKMLVXFARAGL 806
++IVV DEAD + +LGF ++ + R P+SRQT+LFSAT+P ++ AR+ L
Sbjct: 206 VRIVVLDEADEMLDLGFLPDVENLIGRTPASRQTMLFSATMPAPIMALARSQL 258
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 144 bits (350), Expect = 2e-33
Identities = 76/194 (39%), Positives = 110/194 (56%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
S +F +GLS PV + I + GY++PTP+Q T GKDV+ ++TG+GKTA F +P
Sbjct: 18 SQASFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIP 77
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 551
ILE++ +P+ AL++ PTRELA+Q + L K L+ A+ GG S+ +Q
Sbjct: 78 ILERIADGRRRPS------ALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQ 131
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
+ + +I+V TPGR LKLD + DEAD + +GF E++ I L
Sbjct: 132 LQKLEAGA-EIIVGTPGRIYDHIRRRTLKLDETMVCCLDEADEMLNMGFFEEVTRILDNL 190
Query: 732 PSSRQTLLFSATLP 773
P Q LLFSAT+P
Sbjct: 191 PKDCQQLLFSATVP 204
>UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase;
n=3; Cryptosporidium|Rep: Drs1p, eIF4a-1-family RNA SFII
helicase - Cryptosporidium parvum Iowa II
Length = 573
Score = 144 bits (350), Expect = 2e-33
Identities = 83/214 (38%), Positives = 135/214 (63%), Gaps = 12/214 (5%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
+ S+ LS P+LK ++ + + T IQ++ IP+AL+G+D++A A TGSGKTA F+LP LE+
Sbjct: 32 WSSLELSRPLLKALSDLNFVEATLIQKEVIPLALSGRDIMAEAETGSGKTAAFLLPALER 91
Query: 384 LL----VPNNKPTP-GK-----NLRALILSPTRELALQTLRFVRELGKFTG-LTSAAILG 530
LL V N++ + G+ + L+L P+RELA+Q + L K+ +T A + G
Sbjct: 92 LLRSPYVRNSRVSSLGRVGGAVGTKVLVLLPSRELAMQCFGVLESLTKYCPVITRAVVTG 151
Query: 531 GESIEQQFNVMSGSSPDIVVATPGRFLHICIE-MCLKLDNIKIVVFDEADRLFELGFGEQ 707
G +I+QQ ++ P IV+ATPGR L + + + ++L+ ++I++ DEADRL ++GF ++
Sbjct: 152 GMNIQQQERILK-CQPHIVIATPGRILDMLLNTLSIQLELLEIIILDEADRLLDMGFRQE 210
Query: 708 LQEICARLPSSRQTLLFSATLPKMLVXFARAGLS 809
EI +RQT+LFSATL + + A L+
Sbjct: 211 CLEILKYSSRTRQTMLFSATLSRSVTDLALLALN 244
>UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX10 - Homo sapiens (Human)
Length = 875
Score = 144 bits (350), Expect = 2e-33
Identities = 81/202 (40%), Positives = 122/202 (60%), Gaps = 1/202 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F LS LKG+ + Y+ T IQ++TI +AL GKDV+ A+TGSGKT F++P+LE
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEA 130
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L T G L LI+SPTRELA QT +R++GK ++ I+GG+ ++ + +
Sbjct: 131 LYRLQWTSTDG--LGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI 188
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
++ +I+V TPGR L H+ + +++++V DEADR+ ++GF + + + LP
Sbjct: 189 --NNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKK 246
Query: 741 RQTLLFSATLPKMLVXFARAGL 806
RQTLLFSAT K + AR L
Sbjct: 247 RQTLLFSATQTKSVKDLARLSL 268
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 144 bits (349), Expect = 2e-33
Identities = 78/194 (40%), Positives = 120/194 (61%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F S G + V+K + + GY++ TPIQ+K IP+A G D+ A A+TG+GKTA F LP+++
Sbjct: 2 SFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQ 61
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+LL + K K RALI +PTRELA Q ++ K+T L+ AAI GG + Q +
Sbjct: 62 QLL-ESGKSASRKTARALIFAPTRELAEQIADNIKAYTKYTNLSVAAIFGGRKMSSQERM 120
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ + DI+VATPGR + + NI+ +VFDEADR+ ++GF +++I + ++
Sbjct: 121 LE-NGVDILVATPGRLEEHIESGNVSVANIEFLVFDEADRILDMGFINAVRKIMLDVETN 179
Query: 741 RQTLLFSATLPKML 782
Q ++FSAT L
Sbjct: 180 PQIMMFSATTSSQL 193
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 144 bits (349), Expect = 2e-33
Identities = 79/200 (39%), Positives = 119/200 (59%), Gaps = 1/200 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F +GL +LK + GY+ TP+Q++ IP AL+G D++ + TGSGKTA F+LP ++
Sbjct: 2 SFSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGKTAAFLLPSIQ 61
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQQFN 557
+LL + G R L+L+PTRELALQ + GK +A ++GG Q
Sbjct: 62 RLLAEPAVKSIGP--RVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGGAPYGLQLK 119
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+S D+VVATPGR + + ++++V DEADR+ ++GF + ++ I AR P+
Sbjct: 120 RLS-QPVDVVVATPGRLIDHLERGKIDFSRLEVLVLDEADRMLDMGFVDDIKAIAARCPA 178
Query: 738 SRQTLLFSATLPKMLVXFAR 797
RQTLLFSATL ++ AR
Sbjct: 179 ERQTLLFSATLDGVVGNLAR 198
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 144 bits (349), Expect = 2e-33
Identities = 79/198 (39%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+++GLS +L+ + G+ PTPIQ+++IP + G+D++ +A+TG+GKT F+LP+L K
Sbjct: 3 FEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLHK 62
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGG-ESIEQQFNV 560
+ G RAL+LSPTRELA Q + ++ K+ + ++GG + I Q+ N+
Sbjct: 63 IAEGRRH---GIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNL 119
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ DIVVATPGR L L L N +V+ DEADR+ ++GF + I +LP
Sbjct: 120 K--RNWDIVVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLDMGFLPDINTIVRQLPKG 177
Query: 741 RQTLLFSATLPKMLVXFA 794
RQ+LLFSAT P + A
Sbjct: 178 RQSLLFSATCPPRIQELA 195
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 144 bits (349), Expect = 2e-33
Identities = 87/234 (37%), Positives = 124/234 (52%), Gaps = 2/234 (0%)
Frame = +3
Query: 111 DDHLPGFDAPKADXXXXXXXXXXXXXXSSGA-FQSMGLSFPVLKGITKRGYKQPTPIQRK 287
DD D+P AD F +G+ +++ T G+K PTPIQ K
Sbjct: 74 DDPSADKDSPAADEEQDEKKVATIADDGKKVEFSDLGVIPQIVEACTNMGFKHPTPIQVK 133
Query: 288 TIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQ 467
IP AL +DV+ +A+TGSGKTA F +PIL+ L N KP A +L+PTRELA Q
Sbjct: 134 AIPEALQARDVIGLAQTGSGKTAAFTIPILQALW-DNPKP-----FFACVLAPTRELAYQ 187
Query: 468 TLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFL-HICIEMCLKLD 644
+ V LG G+ SA I+GG + Q ++ P ++VATPGR H+ L
Sbjct: 188 ISQQVEALGSTIGVRSATIVGGMDMMSQ-SIALSKRPHVIVATPGRLQDHLENTKGFSLR 246
Query: 645 NIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFSATLPKMLVXFARAGL 806
++ +V DEADRL ++ FG + ++ +P R+T+LFSAT+ + RA L
Sbjct: 247 GLQYLVMDEADRLLDMDFGPIIDKLLQSIPRERRTMLFSATMTTKVAKLQRASL 300
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 144 bits (349), Expect = 2e-33
Identities = 77/196 (39%), Positives = 118/196 (60%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ L +L GI + G+++P+PIQ + IP+A+TG+D++A A+ G+GKTA FV+P LEK
Sbjct: 48 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEK 107
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
+ KP K ++ALI+ PTRELALQT + VR LGK G++ GG ++ +
Sbjct: 108 V-----KPKLNK-IQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDI-LR 160
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+ I+V TPGR L + L + + + DEAD++ F +++I + LP +
Sbjct: 161 LNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTH 220
Query: 744 QTLLFSATLPKMLVXF 791
Q+LLFSAT P + F
Sbjct: 221 QSLLFSATFPLTVKEF 236
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 144 bits (348), Expect = 3e-33
Identities = 78/189 (41%), Positives = 115/189 (60%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ + L +L I ++ Y +PTPIQ + IP L KDV+A A TG+GKTA FVLP L+
Sbjct: 3 FEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPALQF 62
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
LL + P P + R LIL+PTRELA Q + V++LG S + GG + ++Q ++
Sbjct: 63 LL---DDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAHCPFESNVVTGGFASDKQLEIL 119
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
S DI+VATPGR L+I + + L +I++++ DEADR+ ++G G + + +P
Sbjct: 120 Q-SKIDILVATPGRLLNIMSKEFIDLSDIELLIIDEADRMLDMGQGPDVLALIEAIPGDF 178
Query: 744 QTLLFSATL 770
Q FSATL
Sbjct: 179 QAACFSATL 187
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 144 bits (348), Expect = 3e-33
Identities = 76/189 (40%), Positives = 115/189 (60%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + LS + + K + +PTPIQ I AL GKD+VA A+TG+GKT F+LP ++
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L +P +RALIL+PTRELALQ + ++ + TG+ +A +GG + Q +
Sbjct: 64 LSTEPRQP----GVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDI 119
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
G + +IVVATPGR + L +++++ DE+DR+ ++GF ++ I A +P+ R
Sbjct: 120 RGGA-NIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLDMGFLPTIKRIIAAMPAER 178
Query: 744 QTLLFSATL 770
QTLLFSATL
Sbjct: 179 QTLLFSATL 187
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 144 bits (348), Expect = 3e-33
Identities = 78/198 (39%), Positives = 117/198 (59%), Gaps = 4/198 (2%)
Frame = +3
Query: 216 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVP 395
GL L I + GY PTPIQ + +P ++G+D++ +A+TGSGKT F+LP+ +
Sbjct: 482 GLPASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRH--IK 539
Query: 396 NNKPT-PGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGS 572
+ +P P + +I++PTRELA+Q R +R K GL +A + GG I +Q M
Sbjct: 540 DQRPVEPSEGPVGIIMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPISEQIAEMK-K 598
Query: 573 SPDIVVATPGRFLHICIEMCLKLDN---IKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+ DIVVATPGR + + ++ N + +V DEADR+F++GF Q+ +I + R
Sbjct: 599 TADIVVATPGRLIDLLTANSGRVTNLYRVTYLVLDEADRMFDMGFEPQVMKILNNIRPDR 658
Query: 744 QTLLFSATLPKMLVXFAR 797
QT+LFSAT PK + AR
Sbjct: 659 QTVLFSATFPKQMESLAR 676
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 143 bits (347), Expect = 4e-33
Identities = 80/202 (39%), Positives = 119/202 (58%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
S +F + LS V + +T GY+ PT +Q + IP+AL KD+V ++TGSGKTA F +P
Sbjct: 2 SKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIP 61
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 551
+ E + NKP +AL+L+PTRELA+Q + +G+F + +AAI G +Q
Sbjct: 62 LCEMVEWEENKP------QALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQ 115
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
+ IVV TPGR L + L L+ +K +V DEAD + +GF +Q++ I L
Sbjct: 116 -KLELKQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDEL 174
Query: 732 PSSRQTLLFSATLPKMLVXFAR 797
P+ R T+LFSATLP+ + +R
Sbjct: 175 PTKRMTMLFSATLPEDVERLSR 196
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 143 bits (347), Expect = 4e-33
Identities = 75/201 (37%), Positives = 114/201 (56%), Gaps = 2/201 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F L +++ I G+ +PIQ + +P L G+D++ A+TG+GKTA F++ +L+K
Sbjct: 100 FHDFNLDARIMRSIQDLGFSYASPIQAEALPYTLAGRDIIGKAQTGTGKTAAFLITVLQK 159
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
LL + RALIL+PTRELA+Q + L K+ L +LGG ++Q +
Sbjct: 160 LLTVKPEERFASEPRALILAPTRELAMQIAKDADGLSKYADLNIVTVLGGVDYDKQKEQL 219
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP--S 737
D+VVATPGR L + + LD ++++V DEADR+ ++GF L+ I P S
Sbjct: 220 ENEVVDVVVATPGRLLDYLQQGIVYLDQVEMLVIDEADRMLDMGFIPDLKRIIRGTPEKS 279
Query: 738 SRQTLLFSATLPKMLVXFARA 800
RQT LFSAT P +V + +
Sbjct: 280 IRQTQLFSATYPYDVVALSES 300
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 143 bits (347), Expect = 4e-33
Identities = 81/191 (42%), Positives = 116/191 (60%), Gaps = 2/191 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
FQS L +LKGI G+ + T +Q++TIP AL +D++ ARTGSGKTA FV+P+L+
Sbjct: 2 FQSFSLDQRILKGIEALGFTKATDVQQQTIPEALKQQDLMVCARTGSGKTAAFVVPMLQH 61
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
LL P RALIL PTRELA Q L+ + L KFTG+ S I GG+ + Q +
Sbjct: 62 LL---THKAPNSGTRALILVPTRELAKQLLKQCQALAKFTGIQSGMITGGQEFKFQ-AAL 117
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL--PS 737
+P+I++ATPGR + + +++++ + DEADR+ ++GF E + I +
Sbjct: 118 FRKNPEIIIATPGRLIDHLKQKKDLMEDVEYFILDEADRMLDMGFEEDVLTIANACSGKA 177
Query: 738 SRQTLLFSATL 770
QTLLFSATL
Sbjct: 178 KPQTLLFSATL 188
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 143 bits (347), Expect = 4e-33
Identities = 74/197 (37%), Positives = 116/197 (58%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +G+S + + K +PTP+Q + IP L +DV+A A+TG+GKT F+LPILE+
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
+ V KPT ++ALI++PTRELA+Q ++L + G+ A GG+ +EQQ +
Sbjct: 65 VNV--EKPT----IQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKL 118
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
GS I++ TPGR L + L + ++V DEAD++ +GF +++I +P R
Sbjct: 119 KGSI-HIIIGTPGRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRDVEDIMTHIPKRR 177
Query: 744 QTLLFSATLPKMLVXFA 794
Q + FSAT+P + A
Sbjct: 178 QNMFFSATMPNQVRTLA 194
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 143 bits (347), Expect = 4e-33
Identities = 79/198 (39%), Positives = 117/198 (59%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F++ +S +L+ + GY +PT +Q+ IP AL KD+V ++TGSGKTA F +P+ E
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCEL 63
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
NKP +ALIL+PTRELA+Q + +G+F + + A+ G S ++Q +
Sbjct: 64 ANWDENKP------QALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAEL 117
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
S IVV TPGR L + L LD + +V DEAD + +GF EQ++ I LP+ R
Sbjct: 118 KQKS-HIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTER 176
Query: 744 QTLLFSATLPKMLVXFAR 797
T+LFSATLP+ + +R
Sbjct: 177 TTMLFSATLPQDIEKLSR 194
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 143 bits (346), Expect = 5e-33
Identities = 91/227 (40%), Positives = 125/227 (55%), Gaps = 25/227 (11%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F+ M LS +LK + GY PTPIQ+ IP+ALTGKD+ A A TG+GKTA FVLPILE
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILE 208
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+++ +P R L+L PTRELA+Q + R+L F L GG ++ Q
Sbjct: 209 RMIY---RPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAA 265
Query: 561 MSGSSPDIVVATPGRFL-HI---------CIEMCLKLDNI---------------KIVVF 665
+ S PD+VVATPGR + H+ IE+ K NI +++V
Sbjct: 266 LR-SGPDVVVATPGRLIDHLHNSPSFNLSNIEVFFKTPNIPPKKNSRKICKIPNFQVLVL 324
Query: 666 DEADRLFELGFGEQLQEICARLPSSRQTLLFSATLPKMLVXFARAGL 806
DEADR+ E F +Q+ E+ +RQTLLFSAT+ + + A L
Sbjct: 325 DEADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEIDELASMSL 371
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 143 bits (346), Expect = 5e-33
Identities = 75/200 (37%), Positives = 120/200 (60%), Gaps = 1/200 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F + LS ++K I GY++PTPIQ++ IP+ L G DV A TG+GKTA F +P +E
Sbjct: 5 SFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPAIE 64
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT-GLTSAAILGGESIEQQFN 557
L P N+ N++ ++L P+RELA+Q + +L G++ + GG+ IE+Q
Sbjct: 65 -LCQPANR-----NVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIK 118
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+S I++ TPGR + L LD + +VV DEAD++ ++GF E ++EI + +P
Sbjct: 119 ALS-RGVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFREDIEEILSHIPK 177
Query: 738 SRQTLLFSATLPKMLVXFAR 797
RQT++ SAT P ++ +R
Sbjct: 178 ERQTVILSATFPPEILDISR 197
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 143 bits (346), Expect = 5e-33
Identities = 78/199 (39%), Positives = 113/199 (56%), Gaps = 1/199 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +GL P+L+ + GY++P+PIQ + IP L G+DV+ MA+TGSGKTA F LP+L+
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQQFNV 560
L P + L+L+PTRELA+Q + + K G+ A+ GG+ + Q
Sbjct: 68 LDPELKAP------QILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRA 121
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ P IVV TPGR L L L + +V DEAD + +GF E ++ I A++P
Sbjct: 122 LR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG 180
Query: 741 RQTLLFSATLPKMLVXFAR 797
QT LFSAT+P+ + R
Sbjct: 181 HQTALFSATMPEAIRRITR 199
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 142 bits (345), Expect = 7e-33
Identities = 75/189 (39%), Positives = 119/189 (62%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F+ +G+ P+L I GY++PT IQ + IP+ L DV A A+TG+GKTA F L +L+
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQ 61
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+L ++ + LR L+++PTREL++Q ++ K G+ A ++GG+ +E Q +
Sbjct: 62 RLRKTSDDKQ--RALRGLVIAPTRELSIQIYEDLQSYAKNMGINIAVLVGGKDLESQQKI 119
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ DIV+ATPGR L ++ L L +++I V DEADR+ ++GF ++++ I LP
Sbjct: 120 LK-EGVDIVIATPGRVLE-HVDKGLSLSHVEIFVLDEADRMLDMGFMKEIRRIHPILPKR 177
Query: 741 RQTLLFSAT 767
QTLLFSAT
Sbjct: 178 HQTLLFSAT 186
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 142 bits (345), Expect = 7e-33
Identities = 81/193 (41%), Positives = 119/193 (61%), Gaps = 2/193 (1%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
S F S+GL ++ +T +GY+ PTPIQ IP AL G D++A A+TG+GKTA F+LP
Sbjct: 28 SNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPS 87
Query: 375 LEKL-LVPNNKPTPGKN-LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQ 548
LE+L +P + +R L+L+PTRELA Q + V+ K L + GG ++++
Sbjct: 88 LERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPLRHTVLFGGMNMDK 147
Query: 549 QFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR 728
Q + +IVVAT GR L + + L+ ++IVV DEADR+ ++GF + +++I
Sbjct: 148 QTADLRAGC-EIVVATVGRLLDHVKQKNISLNKVEIVVLDEADRMLDMGFIDDIRKIMQM 206
Query: 729 LPSSRQTLLFSAT 767
LP RQTLLFSAT
Sbjct: 207 LPKQRQTLLFSAT 219
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 142 bits (345), Expect = 7e-33
Identities = 78/203 (38%), Positives = 117/203 (57%), Gaps = 4/203 (1%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F GL P+LK + KR Y++P PIQ + IP + G+DV+ +A TGSGKT F+LP +
Sbjct: 369 SFSQCGLPDPILKILEKREYERPFPIQMQCIPALMCGRDVIGIAETGSGKTLAFLLPAIR 428
Query: 381 KLL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
L P+ + G + L+++PTREL +Q + + GL + AI GG I +Q N
Sbjct: 429 HALDQPSLRENDG--MIVLVIAPTRELVIQISNESSKFSRAVGLKTLAIYGGAGIGEQLN 486
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVF---DEADRLFELGFGEQLQEICAR 728
+ + +IV+ TPGR + + K+ N++ V F DEADR+F++GF Q+ I
Sbjct: 487 ALKRGA-EIVIGTPGRLIDVLTLSKGKVTNLRRVTFLVLDEADRMFDMGFAPQISAIVGN 545
Query: 729 LPSSRQTLLFSATLPKMLVXFAR 797
+ RQT LFSAT P M+ A+
Sbjct: 546 IRPDRQTALFSATFPIMIENLAK 568
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 142 bits (344), Expect = 9e-33
Identities = 77/196 (39%), Positives = 120/196 (61%), Gaps = 1/196 (0%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
S+ +F S+ L L + + GY + TP+Q T+P L+G DV A A+TGSGKTA F +
Sbjct: 2 STTSFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIG 61
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT-GLTSAAILGGESIEQ 548
+L++++V + +AL+L PTRELA Q + +R L +F + + GG+ + Q
Sbjct: 62 LLDRIVVSDF------TTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQ 115
Query: 549 QFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR 728
Q + + +P IVV TPGR + L LD++K++V DEADR+ ++GF + + ++ +
Sbjct: 116 QLDSLV-HAPHIVVGTPGRIQDHLRKQSLALDSLKVLVLDEADRMLDMGFTDAIDDVISY 174
Query: 729 LPSSRQTLLFSATLPK 776
PS RQTLLFSAT P+
Sbjct: 175 TPSDRQTLLFSATYPQ 190
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 142 bits (344), Expect = 9e-33
Identities = 77/190 (40%), Positives = 112/190 (58%), Gaps = 2/190 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+S + +L+ I + GY+ TP+Q++ IP G+DV+A A+TG+GKTA F LPIL+K
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 384 LLVPNNKP--TPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
+ + +P N RALIL+PTRELA Q + K ++ I GG + Q
Sbjct: 63 M---HERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQ 119
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+ + DI+VATPGR L + L L N++ +V DEADR+ ++GF +Q+I +
Sbjct: 120 KLKQGA-DIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLDMGFSTDIQKILQAVNK 178
Query: 738 SRQTLLFSAT 767
RQ LLFSAT
Sbjct: 179 KRQNLLFSAT 188
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 142 bits (343), Expect = 1e-32
Identities = 85/206 (41%), Positives = 119/206 (57%), Gaps = 2/206 (0%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
+G F ++G+ VL IT GY++P+PIQ + IP+ L G D++ A+TG+GKTA F LP+
Sbjct: 22 TGGFAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPM 81
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQ-TLRFVRELGKFTGLTSAAILGGESIEQQ 551
L ++ +P + LIL+PTRELALQ F + G+ A+ GG + Q
Sbjct: 82 LSRIDPARREP------QLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQ 135
Query: 552 FNVMSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR 728
+ I+VATPGR H+ + L L +K +V DEAD + +LGF E L+ I A
Sbjct: 136 LKALR-QGAQILVATPGRLCDHLRRDEQL-LSTVKHLVLDEADEMLKLGFMEDLEVIFAA 193
Query: 729 LPSSRQTLLFSATLPKMLVXFARAGL 806
LP SRQT+LFSATLP + A L
Sbjct: 194 LPESRQTVLFSATLPHSIREIAEKHL 219
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 142 bits (343), Expect = 1e-32
Identities = 79/190 (41%), Positives = 110/190 (57%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ L +L+ + RG PTPIQ +P+AL GKD++ ARTG+GKT F LPI E+
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAER 62
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L + G+ RAL+L+PTRELALQ + + L A+ GG +Q +
Sbjct: 63 LAPSQER---GRKPRALVLTPTRELALQVASELTAVAPH--LKVVAVYGGTGYGKQKEAL 117
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+ D VVATPGR L + L L +++ V DEAD + +GF E+++ + + P SR
Sbjct: 118 LRGA-DAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATPPSR 176
Query: 744 QTLLFSATLP 773
QTLLFSATLP
Sbjct: 177 QTLLFSATLP 186
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 142 bits (343), Expect = 1e-32
Identities = 75/192 (39%), Positives = 116/192 (60%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F+ +G+ +L+ I + +++PT IQ+ IP+ L GKD++ A TGSGKT F I++
Sbjct: 3 SFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQ 62
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
K+ G +RAL+L+PTRELA Q ++E + L A I GG +I Q
Sbjct: 63 KI-------EKGNGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQ 115
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ + D+VVATPGR L + L +++I+V DEADR+ ++GF + ++EI PS
Sbjct: 116 LERA--DVVVATPGRLLDHIERGTIDLGDVEILVLDEADRMLDMGFIDDVEEIIDECPSD 173
Query: 741 RQTLLFSATLPK 776
RQT++FSAT+ K
Sbjct: 174 RQTMMFSATVSK 185
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 141 bits (342), Expect = 2e-32
Identities = 79/191 (41%), Positives = 119/191 (62%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F +G+S ++ + K G+ PT IQ + IP L+G+DVV ++TG+GKTA F LPILE
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILE 63
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+L P K ++A++L+PTRELA+Q + + +GL + AI GG+SI++Q
Sbjct: 64 RL-DPQQKA-----VQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQ 117
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ IVV TPGR + + LKLD +K V DEAD + +GF + +++I ++ P
Sbjct: 118 LK-RGVHIVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDDVEKILSQAPQD 176
Query: 741 RQTLLFSATLP 773
RQT LFSAT+P
Sbjct: 177 RQTALFSATMP 187
>UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3;
Deltaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Desulfovibrio desulfuricans (strain G20)
Length = 530
Score = 141 bits (341), Expect = 2e-32
Identities = 77/194 (39%), Positives = 115/194 (59%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F L +++ ++ RG+ PTPIQ K +P AL G+D++ +A TG+GKTA FVLP+L
Sbjct: 57 SFARFSLHPALIEAVSARGFVNPTPIQEKALPPALAGQDILGLAATGTGKTAAFVLPLLH 116
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+LL+ + LRAL+++PTREL Q V+ L +F L SA + GG + Q V
Sbjct: 117 RLLLQGE--SARGTLRALVVAPTRELVAQIHEEVKTLARFCRLRSATVYGGVGMHAQ-TV 173
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ DIV+A PGR L L ++ ++V DEAD +F++GF ++EI
Sbjct: 174 QLRTGVDIVLACPGRLLDHVRRGHADLSHVDMLVLDEADMMFDMGFLSDVREILHCTRVR 233
Query: 741 RQTLLFSATLPKML 782
+QT+LFSAT+P L
Sbjct: 234 KQTMLFSATMPAPL 247
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 141 bits (341), Expect = 2e-32
Identities = 81/194 (41%), Positives = 113/194 (58%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F ++GLS V+K + GY PTPIQ +TIP L KDV+ +A+TG+GKTA FVLP+L
Sbjct: 8 FDNLGLSAKVIKAVQLAGYTAPTPIQSETIPHVLQHKDVLGIAQTGTGKTASFVLPMLTL 67
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L K + R LIL PTRELA Q + G L A ++GG S + Q +
Sbjct: 68 LEKGRAK---ARMPRTLILEPTRELAAQVKENFDKYGINHRLNVALLIGGVSFDHQDRKL 124
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+ D+++ATPGR L L L ++I+V DEADR+ ++GF ++ IC P +R
Sbjct: 125 ERGA-DVLIATPGRLLDHFERGTLLLMGVEILVIDEADRMLDMGFIPDIERICKLTPFTR 183
Query: 744 QTLLFSATLPKMLV 785
QTL FSAT+ ++
Sbjct: 184 QTLFFSATMAPEII 197
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 141 bits (341), Expect = 2e-32
Identities = 81/204 (39%), Positives = 120/204 (58%), Gaps = 1/204 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F M L ++K I Y +P+ IQ + +PIAL+G+D++ A TGSGKTA F +P+L+
Sbjct: 119 SFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMLQ 178
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQQFN 557
LV G AL+L+PTRELA Q + V+ + L + ++GG +IE+Q +
Sbjct: 179 HCLV-QPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIEKQRS 237
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+ + +I VATPGRF+ + L I VV DEADR+ ++GF Q++EI LP
Sbjct: 238 ELR-AGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLDMGFEPQIREIMRSLPE 296
Query: 738 SRQTLLFSATLPKMLVXFARAGLS 809
QTLLFSAT+P + A+ L+
Sbjct: 297 KHQTLLFSATMPVEIEALAKEYLA 320
>UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase DBP4 -
Chaetomium globosum (Soil fungus)
Length = 825
Score = 141 bits (341), Expect = 2e-32
Identities = 77/202 (38%), Positives = 123/202 (60%), Gaps = 1/202 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + L G+ ++ T +QR IP+AL G+D++ A+TGSGKT F++P+LEK
Sbjct: 55 FTDLPLCEATASGLRASHFEVLTDVQRAAIPLALKGRDILGAAKTGSGKTLAFLVPVLEK 114
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L + K T L ALI+SPTRELA+Q +R++G+ ++ ++GG+S++++ +
Sbjct: 115 LY--HAKWTEYDGLGALIISPTRELAVQIFEVLRKIGRNHFFSAGLVIGGKSLKEEAERL 172
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+I+V TPGR L H+ ++N++I+V DEADR+ ++GF + + LP++
Sbjct: 173 --GRMNILVCTPGRMLQHLDQTANFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLPTT 230
Query: 741 RQTLLFSATLPKMLVXFARAGL 806
RQTLLFSAT K + AR L
Sbjct: 231 RQTLLFSATQSKRVSDLARLSL 252
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 140 bits (340), Expect = 3e-32
Identities = 75/200 (37%), Positives = 119/200 (59%), Gaps = 1/200 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALT-GKDVVAMARTGSGKTACFVLPILE 380
F ++GL + + + +G+K+P+PIQ + IP+ L+ D++ A+TG+GKTA F LPI++
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQ 63
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
K+ KP +ALIL PTRELA+Q ++ K G+T+ + GG I Q
Sbjct: 64 KIEPGLKKP------QALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRA 117
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ D+VVATPGR +H + L+LD+++ +V DEAD + +GF E ++++ P
Sbjct: 118 LK-KGVDLVVATPGRCIHFIEDGKLELDSLEYLVLDEADEMLNMGFVEDVEKVLKASPDD 176
Query: 741 RQTLLFSATLPKMLVXFARA 800
R L+FSAT+P L A +
Sbjct: 177 RTVLMFSATMPPRLKKIAES 196
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 140 bits (339), Expect = 4e-32
Identities = 83/191 (43%), Positives = 116/191 (60%), Gaps = 2/191 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + +L GI +GY+ TPIQ K IP L G+DVV +A+TG+GKTA + LP+L++
Sbjct: 15 FTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYALPLLQQ 74
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGE-SIEQQFNV 560
L + PG+ LRALILSPTR+LA Q + G+ T L A I GG+ + +Q+ +
Sbjct: 75 L----TEGPPGQ-LRALILSPTRDLADQICVAMNHFGRQTHLRCATIYGGKINYTRQYQL 129
Query: 561 MSGSSPDIVVATPGRFLHICI-EMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
++G DI+VA PGR L + + L +K +V DEAD LF+ GF + + I LP
Sbjct: 130 LTG-GVDIIVACPGRLLDLLQGKKNNFLQQVKHLVLDEADHLFDHGFRDAIYHILKHLPP 188
Query: 738 SRQTLLFSATL 770
RQ LLFSAT+
Sbjct: 189 RRQNLLFSATM 199
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 140 bits (339), Expect = 4e-32
Identities = 74/201 (36%), Positives = 121/201 (60%)
Frame = +3
Query: 207 QSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKL 386
++ LS ++ + +PT IQ+++IP+A+ G D++A ++TGSGKT ++LP+++
Sbjct: 6 KNFNLSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLIDSF 65
Query: 387 LVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMS 566
+ NK T ALIL PTRELA Q + ++ + SA ++GGE + +QF +
Sbjct: 66 I--KNKTT------ALILVPTRELATQIHSTLNKVTTSYKINSAVLIGGEPMPKQF-IQL 116
Query: 567 GSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQ 746
+P +++ TPGR + LK+D I I V DE DR+ ++G EQL+EI LP RQ
Sbjct: 117 KKNPKVIIGTPGRIIDHLNRGSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQ 176
Query: 747 TLLFSATLPKMLVXFARAGLS 809
L+FSAT+PK ++ ++ L+
Sbjct: 177 VLMFSATMPKHIIAVSQKYLN 197
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 140 bits (339), Expect = 4e-32
Identities = 84/203 (41%), Positives = 110/203 (54%), Gaps = 1/203 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F S+GL + + + GY+ TPIQ TIP+ L G+DVV +A+TG+GKTA F LPIL
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQQFNV 560
+ V P +AL+L PTRELA Q R G+ GL +I GG + QQ
Sbjct: 71 IDVKVRSP------QALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKS 124
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ IVVATPGR L + L I VV DEAD + +GF + + I A+ P
Sbjct: 125 LR-EGTHIVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDDVDTILAKTPKE 183
Query: 741 RQTLLFSATLPKMLVXFARAGLS 809
R+ LFSAT+PK + A LS
Sbjct: 184 RKVALFSATMPKRVRDIANKHLS 206
>UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FAL1,
involved in rRNA maturation, DEAD-box superfamily; n=2;
Ostreococcus|Rep: Predicted ATP-dependent RNA helicase
FAL1, involved in rRNA maturation, DEAD-box superfamily
- Ostreococcus tauri
Length = 1222
Score = 140 bits (339), Expect = 4e-32
Identities = 92/206 (44%), Positives = 120/206 (58%), Gaps = 1/206 (0%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
SSG F+SM + V + + ++GY+ PTPIQRK IP AL G+DVVAMARTGSGKTA F++P
Sbjct: 464 SSGGFESMEILPEVFRAVKRKGYRVPTPIQRKAIPPALEGRDVVAMARTGSGKTAAFLIP 523
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 551
+L KL + + G +R T F +EL KFT L AA++GG+S+E Q
Sbjct: 524 VLSKLRTHSFE--SGCTVRG------------TFAFAKELSKFTNLRVAALVGGDSMEAQ 569
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEM-CLKLDNIKIVVFDEADRLFELGFGEQLQEICAR 728
F +S ++PDI+VATPGR LH E+ L + VV DE +G+ +
Sbjct: 570 FADLS-NNPDIIVATPGRLLHHVEEVKAFTLRTVCHVVLDE-----RIGYWRWV------ 617
Query: 729 LPSSRQTLLFSATLPKMLVXFARAGL 806
S TLLFSATLP L F R GL
Sbjct: 618 ---SGSTLLFSATLPSALAEFVRVGL 640
>UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase; n=3;
Cryptosporidium|Rep: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase - Cryptosporidium
parvum Iowa II
Length = 770
Score = 140 bits (339), Expect = 4e-32
Identities = 82/198 (41%), Positives = 124/198 (62%), Gaps = 5/198 (2%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
S F + +S L+G+ GY Q T IQR T+P +L G+D++ ARTGSGKT +V+P
Sbjct: 69 SPDLFSDLPISRRTLEGLRAEGYYQMTLIQRDTLPHSLQGRDIIGQARTGSGKTLAYVIP 128
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQ 548
ILE + N G L +LIL+PTRELA Q ++E+GKF + L++ I+GG+ I+
Sbjct: 129 ILENIYRDNYCSIDG--LLSLILTPTRELASQVFDVIKEIGKFHSTLSAGCIVGGKDIKS 186
Query: 549 QFNVMSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICA 725
+ + + + +I+VATPGR + H+ +N+KI+V DE DR+ ++GF ++ I
Sbjct: 187 ESSRI--NMLNILVATPGRLIQHMDESPLWDANNLKILVIDEVDRMLDMGFLNDIKIILD 244
Query: 726 RLPSS---RQTLLFSATL 770
+PSS RQT+LFSAT+
Sbjct: 245 GIPSSSSGRQTMLFSATV 262
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 140 bits (339), Expect = 4e-32
Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 14/208 (6%)
Frame = +3
Query: 216 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVP 395
G+ +L I + Y++PTP+Q+ +IP L G+D++A A+TGSGKTA F+ PI+ K+L
Sbjct: 207 GIHEILLDNIRRVKYERPTPVQKFSIPTVLNGRDLMACAQTGSGKTAAFLFPIVMKMLND 266
Query: 396 NNKPTPGK-NLR--------ALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQ 548
PTP + +LR AL+LSPTRELA+QT R+ TG+ + + GG +
Sbjct: 267 GPPPTPQQSSLRIKRMAYPVALVLSPTRELAIQTYEESRKFCFGTGIRTNVLYGGSEVRS 326
Query: 549 QFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEIC-- 722
Q + S DI+VATPGR + + L IK ++ DEADR+ ++GF Q++EI
Sbjct: 327 QIMDLDRGS-DIIVATPGRLRDLIDRGKVNLKLIKFLILDEADRMLDMGFAPQIREIVED 385
Query: 723 ARLPSS---RQTLLFSATLPKMLVXFAR 797
+ +P S RQT++FSAT P+ + A+
Sbjct: 386 SEMPHSLDGRQTVMFSATFPREIQQLAK 413
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 140 bits (339), Expect = 4e-32
Identities = 82/208 (39%), Positives = 117/208 (56%), Gaps = 7/208 (3%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +G+ ++K + G+K P+ IQ + +P AL GKDV+ +A+TGSGKT F +PIL+
Sbjct: 11 FAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQA 70
Query: 384 LL--VPNNKPTPGKN----LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIE 545
LL V +++P G+ A +LSPTRELA+Q LG L A ++GG
Sbjct: 71 LLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRM 130
Query: 546 QQFNVMSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEIC 722
QQ + G P ++VATPGR H+ L ++K +V DEADRL F + L +I
Sbjct: 131 QQ-TIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQIL 189
Query: 723 ARLPSSRQTLLFSATLPKMLVXFARAGL 806
+P R+T LFSAT+ K + RA L
Sbjct: 190 EEIPLERKTFLFSATMTKKVRKLQRACL 217
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 140 bits (338), Expect = 5e-32
Identities = 75/190 (39%), Positives = 111/190 (58%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +GLS L+ + GY TPIQ IP+AL G+DV+ +A+TG+GKTA F LP+++K
Sbjct: 4 FSELGLSPTTLQAVADTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLIDK 63
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L+ N + RAL+++PTRELA Q + K T L+ A ++GG S Q +
Sbjct: 64 LM---NGRAKARMPRALVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQEKKL 120
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
D+++ATPGR L L + ++ +V DEADR+ ++GF ++ I P +
Sbjct: 121 D-RGVDVLIATPGRLLDHFERGKLLMTGVQFLVVDEADRMLDMGFIPDIERIFKMTPPKK 179
Query: 744 QTLLFSATLP 773
QTL FSAT+P
Sbjct: 180 QTLFFSATMP 189
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 140 bits (338), Expect = 5e-32
Identities = 83/205 (40%), Positives = 119/205 (58%), Gaps = 3/205 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + L V GI G++ TPIQ T+P L G+D+ A+TG+GKTA F+L + +
Sbjct: 127 FLDLPLHEDVQFGIQHAGFEYCTPIQALTLPALLEGRDLAGKAQTGTGKTAAFLLAVFTR 186
Query: 384 LL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
LL P + PG RAL+L+PTRELA+Q + L FTGLTS + GG E+Q
Sbjct: 187 LLNHPLEERKPGCP-RALVLAPTRELAMQIQKDAEVLEIFTGLTSVVVFGGMDHEKQRRS 245
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP-- 734
+ D+V+ TPGR + LKL ++++V DEADR+ ++GF ++ I ++LP
Sbjct: 246 LE-QPVDLVIGTPGRIIDYSRGGSLKLSKVEVLVIDEADRMLDMGFIPDVKRIVSQLPRK 304
Query: 735 SSRQTLLFSATLPKMLVXFARAGLS 809
RQTLLFSATL ++ A L+
Sbjct: 305 GERQTLLFSATLEDHILRLASGWLA 329
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 140 bits (338), Expect = 5e-32
Identities = 79/207 (38%), Positives = 118/207 (57%), Gaps = 1/207 (0%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
S F+ +GLS +L + GY+ P+PIQ + I L KD++ A+TG+GKTA FVLP
Sbjct: 10 SPSKFERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLP 69
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQ 548
+L+K+ + N P + LIL+PTRELA+Q V+ + G I GG+S +
Sbjct: 70 LLDKINLNINAP------QLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDI 123
Query: 549 QFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR 728
Q + +V TPGR + + LKLDN+K V DEAD + ++GF + ++ I R
Sbjct: 124 QLRPLK-RGVHAIVGTPGRVMDHIEKKTLKLDNLKSFVLDEADEMLKMGFIDDIKWIMQR 182
Query: 729 LPSSRQTLLFSATLPKMLVXFARAGLS 809
+P RQ LFSAT+P ++ A+ L+
Sbjct: 183 IPEQRQIALFSATMPNVIKKIAKQFLN 209
>UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 533
Score = 140 bits (338), Expect = 5e-32
Identities = 83/202 (41%), Positives = 114/202 (56%), Gaps = 5/202 (2%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + L P+L+GI ++ TPIQ +P L G D A+TG+GKTA F++ +L +
Sbjct: 118 FHDLDLPAPILRGIADAEFRYCTPIQAALLPHTLNGLDAAGRAQTGTGKTAVFIITMLTQ 177
Query: 384 LLVPNNKPTPGKNL---RALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
L N G+ RAL+L+PTRELALQ + L + T S AI GG E+Q
Sbjct: 178 FL--RNPAPEGRRKGTPRALVLAPTRELALQIEKETHLLSRHTPFKSVAIFGGMDYEKQK 235
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
++G DIVVATPGR L + L L ++I+V DEADR+ ++GF +Q I P
Sbjct: 236 RRLTGEVIDIVVATPGRLLDFKRQGDLHLSKVEILVIDEADRMLDMGFIPDVQRIIHYTP 295
Query: 735 --SSRQTLLFSATLPKMLVXFA 794
+ RQT+LFSATL + FA
Sbjct: 296 PKAQRQTMLFSATLTAEVTRFA 317
>UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n=6;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 900
Score = 140 bits (338), Expect = 5e-32
Identities = 78/189 (41%), Positives = 117/189 (61%), Gaps = 1/189 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + +S G+ + Y TP+Q+ T+ +AL G DV+ A+TGSGKT CFV+P+LE+
Sbjct: 71 FTELPISQRTQMGLERGHYTILTPVQKGTLHLALAGLDVLGAAKTGSGKTLCFVIPVLER 130
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L + + + AL+LSPTRELALQ + ++ +G L++A + GG ++++ +
Sbjct: 131 LY--RERWSSDMGVGALLLSPTRELALQIFKVMQLVGYKHVLSAALLTGGRDVQEERKRL 188
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
S I+V TPGR L H+ + L LDN+++ DEADRL ++GF E + I A LP
Sbjct: 189 HAIS--IIVGTPGRVLHHLQDDAELVLDNLQLFCMDEADRLLDMGFREAITSILAYLPPQ 246
Query: 741 RQTLLFSAT 767
RQ+LLFSAT
Sbjct: 247 RQSLLFSAT 255
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 140 bits (338), Expect = 5e-32
Identities = 81/202 (40%), Positives = 116/202 (57%), Gaps = 1/202 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ +G+ + + + G+K+PT IQ + IPIAL+GKD++ +A TGSGKTA F +PIL+K
Sbjct: 43 FEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKTAAFTIPILQK 102
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
LL KP + L +LIL+PTREL+LQ + LG GL ILGG + Q +
Sbjct: 103 LL---EKP---QRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLDMVSQALQL 156
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
S P I+V +PGR H+ L+ IK +V DEAD+L F + L +I LP
Sbjct: 157 S-KKPHIIVGSPGRIADHLQNTKGFSLETIKYLVLDEADKLLSTDFDDSLNKIITSLPKD 215
Query: 741 RQTLLFSATLPKMLVXFARAGL 806
+ T L+SAT+ + + L
Sbjct: 216 KVTYLYSATMTSKITKLQKVTL 237
>UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n=6;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania infantum
Length = 924
Score = 140 bits (338), Expect = 5e-32
Identities = 80/193 (41%), Positives = 118/193 (61%), Gaps = 8/193 (4%)
Frame = +3
Query: 243 ITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKN 422
I + GYK+PTP+QR IP+AL+G D++A A+TGSGKTA F++P+++ +LV P +
Sbjct: 487 IERCGYKKPTPVQRYGIPVALSGSDLMACAQTGSGKTAAFLIPVVQYMLVHGVSPARQRK 546
Query: 423 LR--ALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVAT 596
AL+L+PTRELA+Q VR+L T + + GG Q+F DI+VA
Sbjct: 547 SYPIALVLAPTRELAVQIFDEVRKLTFNTDIFYDVVYGGTRYPQRF------EQDILVAC 600
Query: 597 PGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR----LPS--SRQTLLF 758
PGR + E L IK ++ DEADR+ E+GF EQ++E+ A +P+ RQT +F
Sbjct: 601 PGRLRDMFNEEYLSFSAIKFLILDEADRMLEMGFEEQIEELVASRYTDMPTVDERQTFMF 660
Query: 759 SATLPKMLVXFAR 797
SAT P+ ++ A+
Sbjct: 661 SATFPQRILNLAK 673
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 139 bits (337), Expect = 7e-32
Identities = 76/189 (40%), Positives = 114/189 (60%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ L+ +LK + GY P+ +QR+ IP L G+++V ++TGSGKTA F +P+ E
Sbjct: 5 FEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCEN 64
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
+ V N N++ALI+ PTRELALQ + ++G+ + +AI G +SI+ Q +
Sbjct: 65 INVDYN------NIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAEL 118
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
IVVATPGR L +KL+N+K +V DEAD++F GF EQ+++I LP +
Sbjct: 119 K-QRVHIVVATPGRILDHINRGSIKLENVKYLVIDEADKMFNKGFVEQMEKILLNLPKEK 177
Query: 744 QTLLFSATL 770
LFSAT+
Sbjct: 178 IVSLFSATI 186
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 139 bits (337), Expect = 7e-32
Identities = 70/194 (36%), Positives = 115/194 (59%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
A +G+S ++K ++ +G ++ PIQ+ + A+ G+D++ ARTG+GKT F +PI++
Sbjct: 105 AISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIID 164
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
K++ N K G+N L+L+PTRELA Q + RE L + + GG I QQ
Sbjct: 165 KIIKYNAKHGRGRNPLCLVLAPTRELARQVEKEFRE--SAPSLDTICLYGGTPIGQQMRQ 222
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ D+ V TPGR + + L L ++ VV DEAD++ ++GF E ++ I +LP
Sbjct: 223 LD-YGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEK 281
Query: 741 RQTLLFSATLPKML 782
RQ+++FSAT+P +
Sbjct: 282 RQSMMFSATMPSWI 295
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 139 bits (337), Expect = 7e-32
Identities = 77/212 (36%), Positives = 125/212 (58%), Gaps = 11/212 (5%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL-- 377
F+ + L P+L+ + ++G QPTPIQ + +P+ L+G+D++ +A TGSGKT FVLP++
Sbjct: 184 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMV 243
Query: 378 ---EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVREL------GKFTGLTSAAILG 530
E++++P PG+ +I+ P+RELA QT + + + + +G
Sbjct: 244 ALQEEMMMPI---VPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIG 300
Query: 531 GESIEQQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQL 710
G + Q +V+ IVVATPGR + + + LDN + + DEADRL +LGF + +
Sbjct: 301 GVDMRAQLDVVK-KGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDI 359
Query: 711 QEICARLPSSRQTLLFSATLPKMLVXFARAGL 806
+E+ + RQTLLFSAT+PK + FA++ L
Sbjct: 360 REVFDHFKAQRQTLLFSATMPKKIQNFAKSAL 391
>UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70;
Eukaryota|Rep: ATP-dependent RNA helicase HAS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 505
Score = 139 bits (337), Expect = 7e-32
Identities = 78/203 (38%), Positives = 119/203 (58%), Gaps = 2/203 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ + LS P LK I K G+ T +Q +TIP L G+DV+ A+TGSGKT F++P +E
Sbjct: 44 FEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 103
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L KP G + ++++PTRELALQ REL +F T ++GG + Q+ +
Sbjct: 104 LHSLKFKPRNGTGI--IVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKL 161
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS- 737
++++ATPGR L H+ N+K ++ DEADR+ E+GF +++++I LP+
Sbjct: 162 M-KGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNE 220
Query: 738 SRQTLLFSATLPKMLVXFARAGL 806
RQ++LFSAT + AR L
Sbjct: 221 DRQSMLFSATQTTKVEDLARISL 243
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 139 bits (336), Expect = 9e-32
Identities = 76/194 (39%), Positives = 110/194 (56%), Gaps = 1/194 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + L+ +L +T+ G+ PTPIQ IP+ L G+D + A+TG+GKTA F LP+L K
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQQFNV 560
L + KP +A++++PTRELA+Q ++ LG+ GL I GG SI Q
Sbjct: 88 LNLSQYKP------QAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRA 141
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ S IVV TPGR + L LD + DEAD + ++GF + + I + P S
Sbjct: 142 LK-SGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPES 200
Query: 741 RQTLLFSATLPKML 782
Q +LFSAT+P M+
Sbjct: 201 AQRVLFSATMPPMV 214
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 139 bits (336), Expect = 9e-32
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 1/207 (0%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
+ F G + +L ++ +GYK PTPIQ+ IP + G+D++ A+TG+GKTA F LP
Sbjct: 49 NENGFLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALP 108
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLR-FVRELGKFTGLTSAAILGGESIEQ 548
++EKL +NK N + L+++PTRELA Q F + T + AI GG
Sbjct: 109 LIEKL--ADNKEL---NAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRN 163
Query: 549 QFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR 728
Q + D+VV TPGR + + K+++I +V DEAD + +GF E ++ I +
Sbjct: 164 QIYALK-RKVDVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQ 222
Query: 729 LPSSRQTLLFSATLPKMLVXFARAGLS 809
LP ++Q +LFSAT+P + A+ L+
Sbjct: 223 LPKNKQMVLFSATMPNEIRNIAKKYLN 249
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 139 bits (336), Expect = 9e-32
Identities = 79/210 (37%), Positives = 119/210 (56%), Gaps = 9/210 (4%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ M P+L + K+G PTPIQ + +P LTG+D++ +A TGSGKT F LPI+
Sbjct: 49 FKEMKFPRPILAALKKKGITHPTPIQVQGLPAVLTGRDMIGIAFTGSGKTLVFTLPII-M 107
Query: 384 LLVPNNKPTP---GKNLRALILSPTRELALQTLRFVRELGK------FTGLTSAAILGGE 536
+ K P + +I+ P+RELA QT + + F L + +GG
Sbjct: 108 FSLEQEKAMPFQRNEGPYGMIVVPSRELARQTFEVITHFSRALEAHGFPSLRTNLCIGGS 167
Query: 537 SIEQQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQE 716
SI++Q + M +VVATPGR + + + + LD + +V DEADR+ ++GF E ++
Sbjct: 168 SIKEQSDAMK-RGVHMVVATPGRLMDLLDKRIITLDVCRYLVLDEADRMIDMGFEEDVRT 226
Query: 717 ICARLPSSRQTLLFSATLPKMLVXFARAGL 806
I + S RQTLLFSAT+PK + FA++ L
Sbjct: 227 IFSYFKSQRQTLLFSATMPKKIQNFAKSAL 256
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 138 bits (335), Expect = 1e-31
Identities = 76/198 (38%), Positives = 111/198 (56%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F L ++ + K G+ QPTPIQ K IP+ L G D++ A+TG+GKTA F LP+L
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLL- 114
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
NN K ++AL+L+PTRELA Q + G + GG S + Q
Sbjct: 115 -----NNIDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGG 169
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ + +VV TPGR L + + LKLD +K +V DEAD + +GF + ++ I ++ P
Sbjct: 170 LRRGAR-VVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDDIETILSQTPKD 228
Query: 741 RQTLLFSATLPKMLVXFA 794
RQT+LFSATL ++ A
Sbjct: 229 RQTMLFSATLSSRVMSIA 246
>UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=1; Pseudoalteromonas tunicata D2|Rep:
ATP-dependent RNA helicase, DEAD box family protein -
Pseudoalteromonas tunicata D2
Length = 416
Score = 138 bits (335), Expect = 1e-31
Identities = 79/201 (39%), Positives = 112/201 (55%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +GL+ + + GYK PT IQ +I L+G D A+A TG+GKTA ++LP L++
Sbjct: 4 FAELGLNKTLQANVLSLGYKSPTYIQEHSIGAVLSGTDTYAIAPTGTGKTAAYLLPTLQE 63
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L +N + +RAL L PTRELA+Q + + GK L + ++ GG I Q N
Sbjct: 64 LSRVDNSAEQVRPVRALFLVPTRELAVQVEESIAKYGKGLNLRTISVFGGVRIPSQVNRF 123
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+ DIVVATP R + + L+ +K V DEADRL +G +L+ I A +P ++
Sbjct: 124 KRGA-DIVVATPRRLVDLLKVKAFSLEQVKHFVMDEADRLVSMGIVAELRTILAAMPQAK 182
Query: 744 QTLLFSATLPKMLVXFARAGL 806
Q +LFSAT K L FA L
Sbjct: 183 QQILFSATDSKALQKFAADNL 203
>UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 926
Score = 138 bits (334), Expect = 2e-31
Identities = 77/202 (38%), Positives = 119/202 (58%), Gaps = 1/202 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + +S+ + G+ KR + + T IQR TIP L G+DV+A ++TGSGKT +++P++E+
Sbjct: 85 FSDLPISYNTIFGLEKRKFIKMTEIQRCTIPHILAGRDVLAASKTGSGKTLSYLVPLVER 144
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L V P G L A+I+ PTRELA Q + L+ I+GG++++ + M
Sbjct: 145 LYVQKWNPLDG--LGAIIILPTRELATQVFEVFNSFTQNHDLSVGLIIGGKNVKYEKEHM 202
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
G ++++ TPGR L H+ N++++V DEAD + +LGF E L I LP S
Sbjct: 203 KGM--NVLICTPGRLLQHMDETPDFDCTNLQMLVIDEADLILDLGFKEHLNAILLNLPKS 260
Query: 741 RQTLLFSATLPKMLVXFARAGL 806
RQT+LFSATL K + ++ L
Sbjct: 261 RQTILFSATLSKSIHELSKLSL 282
>UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_158_41121_38797 - Giardia lamblia
ATCC 50803
Length = 774
Score = 138 bits (334), Expect = 2e-31
Identities = 85/224 (37%), Positives = 134/224 (59%), Gaps = 23/224 (10%)
Frame = +3
Query: 204 FQSMG-LSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
F+ +G LS PVLK I GY T IQ+ IP+ + G D +++TGSGKTA + +P++
Sbjct: 35 FEKLGKLSPPVLKAIHSLGYSTLTSIQKAAIPVIIDGGDACVVSKTGSGKTAAYSIPLVN 94
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG--LTSAAILGGESIEQQF 554
L+ ++ T G +R L+++PTREL +Q +R+L +FT L ++GGE++E+QF
Sbjct: 95 --LLGCHRATTG--IRGLVIAPTRELCVQIGGVIRKLSRFTDPELRVCLLVGGEALEKQF 150
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCL---KLDNIKIVVFDEADRLFELGFGEQLQEICA 725
++ ++PDI+V TPGR LHI ++ +L +I+ V FDE+DR+FE+ F +Q+ EI
Sbjct: 151 TALT-ANPDIIVCTPGRILHIHDQVSTFKSQLKSIEYVCFDESDRMFEMNFQQQVNEILD 209
Query: 726 RLPSSR-----------------QTLLFSATLPKMLVXFARAGL 806
LP+ R Q ++ SAT+P L F++A L
Sbjct: 210 LLPAERTGGHITETRSARDFLGYQIIMVSATMPNNLAVFSKARL 253
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 138 bits (334), Expect = 2e-31
Identities = 83/201 (41%), Positives = 120/201 (59%), Gaps = 4/201 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F S+ L +L G+T+ G+ TPIQ T+P+AL G+D+ A+TG+GKT F++ ++ +
Sbjct: 11 FSSLDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVVVNR 70
Query: 384 LLV-PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
LL P ++ RALIL+PTRELA+Q + G GL A I GG ++Q
Sbjct: 71 LLSRPGLVNRNPEDPRALILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDKQ-RE 129
Query: 561 MSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
M D+V+ATPGR + ++ + L +I V DEADR+F+LGF + ++ I RLP
Sbjct: 130 MLRKGADVVIATPGRLIDYLKQHEVVSLRVCEICVLDEADRMFDLGFIKDIRFILRRLPE 189
Query: 738 --SRQTLLFSATLPKMLVXFA 794
SRQTLLFSATL ++ A
Sbjct: 190 RCSRQTLLFSATLSHRVLELA 210
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 138 bits (334), Expect = 2e-31
Identities = 75/202 (37%), Positives = 116/202 (57%), Gaps = 4/202 (1%)
Frame = +3
Query: 216 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVP 395
GL+ +L + K Y++P PIQ + +PI ++G+D + +A+TGSGKT FVLP+L +
Sbjct: 402 GLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH--IK 459
Query: 396 NNKPT-PGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGS 572
+ P G L+++PTREL Q +R+ K G+ + GG + QQ + +
Sbjct: 460 DQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRG 519
Query: 573 SPDIVVATPGRFLHICIEMCLKLDNIKIV---VFDEADRLFELGFGEQLQEICARLPSSR 743
+ +IVV TPGR + I K+ N++ V V DEADR+F++GF Q+ I + R
Sbjct: 520 T-EIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDR 578
Query: 744 QTLLFSATLPKMLVXFARAGLS 809
QT+LFSAT P+ + AR L+
Sbjct: 579 QTVLFSATFPRQVETLARKVLN 600
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 138 bits (333), Expect = 2e-31
Identities = 78/191 (40%), Positives = 108/191 (56%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F ++GLS VL + GY PTPIQ + IP L KDV+ +A+TG+GKTA FVLP+L
Sbjct: 2 SFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLARKDVLGIAQTGTGKTAAFVLPMLT 61
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
L + R LIL PTRELA Q G L A ++GG S Q +
Sbjct: 62 IL---EKGRARARMPRTLILEPTRELAAQVKENFDRYGAGQKLNVALLIGGVSFGDQ-DA 117
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
D+++ATPGR L L L ++++V DEADR+ ++GF ++ IC +P +
Sbjct: 118 KLTRGVDVLIATPGRLLDHTERGGLLLTGVELLVIDEADRMLDMGFIPDIERICKLVPFT 177
Query: 741 RQTLLFSATLP 773
RQTL F+AT+P
Sbjct: 178 RQTLFFTATMP 188
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 138 bits (333), Expect = 2e-31
Identities = 74/189 (39%), Positives = 111/189 (58%), Gaps = 1/189 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + ++ P+L + + GY PTPIQ + IP AL G+D++ A+TGSGKTA FV+P+L++
Sbjct: 46 FTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFVIPVLDR 105
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQQFNV 560
L + + K +ALIL+PTRELA Q VR K GL ++GG Q
Sbjct: 106 L---SRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFCVPLVGGAPYNGQITA 162
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ ++VATPGR L + L +++I+V DEADR+ ++GF + + +I P
Sbjct: 163 LK-KGVQVIVATPGRLLDHINAGRVDLSSLEILVLDEADRMLDMGFADDISDILRAAPID 221
Query: 741 RQTLLFSAT 767
RQT++ SAT
Sbjct: 222 RQTIMCSAT 230
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 138 bits (333), Expect = 2e-31
Identities = 78/198 (39%), Positives = 112/198 (56%), Gaps = 1/198 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + LS P+L+ + + GY+ P+PIQ TIP+ L +DV+ A+TG+GKTA F LPIL +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLR-FVRELGKFTGLTSAAILGGESIEQQFNV 560
+ + P +AL+L+PTRELA+Q F R G I GG+S Q +
Sbjct: 69 IDIKQTTP------QALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSA 122
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ +VV TPGR + + L L IK +V DEAD + +GF + ++ I + P S
Sbjct: 123 LR-RGVHVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDDVETILQKTPES 181
Query: 741 RQTLLFSATLPKMLVXFA 794
RQT LFSAT+P + A
Sbjct: 182 RQTALFSATMPSAIKRIA 199
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 138 bits (333), Expect = 2e-31
Identities = 77/201 (38%), Positives = 113/201 (56%), Gaps = 3/201 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F GL P+L + +R Y++P PIQ + IP + G+DV+A+A TGSGKT ++LP +
Sbjct: 390 FSQCGLPDPILSLLQRRNYEKPFPIQMQCIPALMCGRDVLAIAETGSGKTMAYLLPAIRH 449
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
+L K + + LI++PTRELA Q +L K G+ + A+ GG I +Q N +
Sbjct: 450 VLY-QPKLRENEGMIVLIIAPTRELASQIGVESSKLCKLVGIRTKAVYGGSPIGEQLNAL 508
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIK---IVVFDEADRLFELGFGEQLQEICARLP 734
+IV TPGR + + K+ N++ VV DEADR+F+LGF Q+ I +
Sbjct: 509 K-RGVEIVCGTPGRLIEVLTISNGKVTNLRRVTFVVIDEADRMFDLGFSPQISAIVDNIR 567
Query: 735 SSRQTLLFSATLPKMLVXFAR 797
RQT LFSAT P + A+
Sbjct: 568 PDRQTALFSATFPPTIEALAK 588
>UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;
n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 27 - Arabidopsis thaliana (Mouse-ear cress)
Length = 633
Score = 138 bits (333), Expect = 2e-31
Identities = 80/203 (39%), Positives = 117/203 (57%), Gaps = 1/203 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+S+ LS K I + G+ + T IQ K IP + G+DV+ ARTGSGKT F++P +E
Sbjct: 156 FESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVE- 214
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L+ K TP L++ PTRELA+Q+ +EL K+ T ++GGE + + ++
Sbjct: 215 -LLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEIL 273
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ +++VATPGR L H+ N+K +V DEADR+ E F E L++I LP +
Sbjct: 274 A-KGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKT 332
Query: 741 RQTLLFSATLPKMLVXFARAGLS 809
RQT LFSAT + AR L+
Sbjct: 333 RQTSLFSATQSAKVEDLARVSLT 355
>UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX49;
n=34; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX49 - Homo sapiens (Human)
Length = 483
Score = 138 bits (333), Expect = 2e-31
Identities = 87/197 (44%), Positives = 113/197 (57%), Gaps = 4/197 (2%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +GLS +++ + G KQPTP+Q IP L G+D + A+TGSGKTA FVLPIL+K
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L + P + L+L+PTRELA Q R LGK GL I+GG + Q +
Sbjct: 64 L---SEDP---YGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALEL 117
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELG---FGEQLQEICARL 731
S P +V+ATPGR H+ + I+ +V DEADRL E G F L+ I A +
Sbjct: 118 S-RKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAV 176
Query: 732 PSSRQTLLFSATLPKML 782
P+ RQTLLFSATL L
Sbjct: 177 PARRQTLLFSATLTDTL 193
>UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 782
Score = 137 bits (332), Expect = 3e-31
Identities = 79/202 (39%), Positives = 115/202 (56%), Gaps = 1/202 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + LS LKG+ Y T IQR++I +AL G D++ A+TGSGKT F++P++E
Sbjct: 43 FTDLPLSMQTLKGLKDSEYIDLTDIQRQSIGLALKGNDILGAAKTGSGKTLAFLIPVMEI 102
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L G L ALI++PTRELA Q +R++G++ +++ I+GG+ + F
Sbjct: 103 LYCKQWTRLDG--LGALIITPTRELAYQIYETLRKVGRYHDISAGLIIGGKDL--HFEKK 158
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+I++ TPGR L H+ N+KI+V DEADR ++GF + + I LP
Sbjct: 159 RLDQCNIIICTPGRLLQHMDENPLFDCVNMKILVLDEADRCLDMGFEKTMNSIIENLPLE 218
Query: 741 RQTLLFSATLPKMLVXFARAGL 806
RQTLLFSAT K + AR L
Sbjct: 219 RQTLLFSATQTKTVKDLARLSL 240
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 137 bits (332), Expect = 3e-31
Identities = 76/197 (38%), Positives = 110/197 (55%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +G+ +++ + PTP+Q K+IP L GKD++A A+TG+GKTA F LPI++
Sbjct: 9 FADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPIIQA 68
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
+ TP ALIL PTRELA Q + + + T L + GG SI Q N +
Sbjct: 69 VQQKKRNGTP----HALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYGGTSIGVQKNKL 124
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+ DI++ATPGR L + + ++V DEADR+ ++GF LQ I RLP+ +
Sbjct: 125 EEGA-DILIATPGRLLDHLFNGNVNISKTGVLVLDEADRMLDMGFWPDLQRILRRLPNDK 183
Query: 744 QTLLFSATLPKMLVXFA 794
Q +LFSAT K + A
Sbjct: 184 QIMLFSATFEKRIKTIA 200
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 137 bits (332), Expect = 3e-31
Identities = 78/192 (40%), Positives = 107/192 (55%), Gaps = 1/192 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
AF S+GL +L + G+ T IQ TIP L GKDV+ A+TG+GKTA F LP L
Sbjct: 16 AFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALA 75
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQQFN 557
K+ KP + ++L+PTRELA+Q + GK GL A + GG+S QF
Sbjct: 76 KIDTSIKKP------QLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQ 129
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+ + +VV TPGR + LKLD +++ V DEAD + +GF E +Q I +P
Sbjct: 130 QLERGA-QVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPK 188
Query: 738 SRQTLLFSATLP 773
+ Q LFSAT+P
Sbjct: 189 TAQMCLFSATMP 200
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 137 bits (332), Expect = 3e-31
Identities = 76/200 (38%), Positives = 114/200 (57%), Gaps = 2/200 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +G + + G + IQ +PIAL G D++ A TG+GKT F +P+LE+
Sbjct: 112 FAELGARQETVDALAAAGITRAFAIQEYALPIALRGVDLIGQAPTGTGKTLGFGVPLLEQ 171
Query: 384 LLVP--NNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
+L P TP +AL++ PTREL +Q + ++ G G+ I GG + E Q
Sbjct: 172 VLAPAEGGDGTP----QALVVVPTRELGIQVAKDLQAAGSTRGVRVLPIYGGVAYEPQIE 227
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+ S +I+V TPGR L + + LKLD ++ +V DEADR+ +LGF + ++ I A LP
Sbjct: 228 ALR-SGVEILVGTPGRLLDLAKQKHLKLDRVRALVLDEADRMLDLGFLDDVERILAILPE 286
Query: 738 SRQTLLFSATLPKMLVXFAR 797
RQT+LFSAT+P +V +R
Sbjct: 287 DRQTMLFSATMPDPIVALSR 306
>UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2;
Frankia|Rep: DEAD/DEAH box helicase-like - Frankia sp.
(strain CcI3)
Length = 649
Score = 137 bits (331), Expect = 4e-31
Identities = 72/198 (36%), Positives = 114/198 (57%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +G+ + +T+ G PIQ T+P+AL D++ ARTG+GKT F +P+++
Sbjct: 87 FAELGVRAETVSALTEAGIVHAFPIQELTLPLALARNDIIGQARTGTGKTLAFGVPVVQT 146
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
+L + G+ +AL++ PTREL +Q V G GL ++ GG + E Q + +
Sbjct: 147 VLAAK-EGADGRP-QALVVVPTRELCVQVTADVTRAGARRGLRVLSVYGGRAYEPQLSAL 204
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+ DIVV TPGR L + + L L + +V DEAD + +LGF ++ I ++LP+ R
Sbjct: 205 R-AGVDIVVGTPGRLLDLARQHVLDLAGVGTLVLDEADEMLDLGFLPDVERIMSQLPTER 263
Query: 744 QTLLFSATLPKMLVXFAR 797
QT+LFSAT+P ++ AR
Sbjct: 264 QTMLFSATMPGPVISLAR 281
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 137 bits (331), Expect = 4e-31
Identities = 76/189 (40%), Positives = 112/189 (59%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + L+ V K I + GY+ PTPIQ IP AL G+DV+ +A+TG+GKTA F LP++
Sbjct: 13 FADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTASFTLPMITM 72
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L + + R+L+L PTRELA Q K LT A ++GG S ++Q +
Sbjct: 73 LARGRAR---ARMPRSLVLCPTRELAAQVAENFDIYAKHVKLTKALLIGGVSFKEQEQAI 129
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
D+++ATPGR L L L+++K++V DEADR+ ++GF ++ I +P +R
Sbjct: 130 D-KGVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLDMGFIPDIERIFGLVPFTR 188
Query: 744 QTLLFSATL 770
QTL FSAT+
Sbjct: 189 QTLFFSATM 197
>UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinekea
sp. MED297|Rep: ATP-dependent RNA helicase - Reinekea
sp. MED297
Length = 534
Score = 137 bits (331), Expect = 4e-31
Identities = 75/200 (37%), Positives = 116/200 (58%), Gaps = 2/200 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + L +++ I + GY+ +PIQ T+P AL G D + A+TG+GKTA F++ +
Sbjct: 29 FHDLFLPIALMRAIQEVGYEYCSPIQAMTLPYALAGHDCIGKAQTGTGKTAAFLITAITD 88
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
LL + RALIL+PTRELALQ + L K++ L AA++GG ++Q +
Sbjct: 89 LLEHRLEEQYVGEPRALILAPTRELALQIAEDAKALTKYSRLKVAAVVGGMDFDKQKQQL 148
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP--S 737
DI+VATPGR + + LD I++++ DEADR+ ++GF ++ I P
Sbjct: 149 HEQRTDILVATPGRLIDFMNRKAVFLDQIEMLIIDEADRMLDMGFIPDIKTIVRATPRTE 208
Query: 738 SRQTLLFSATLPKMLVXFAR 797
+RQTLLFSAT + ++ A+
Sbjct: 209 NRQTLLFSATFSQDILNLAQ 228
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 137 bits (331), Expect = 4e-31
Identities = 77/202 (38%), Positives = 119/202 (58%), Gaps = 1/202 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ + + +L+ I + G+K+PT IQR+ +P A KD++ ++ TGSGKTACF++PIL+
Sbjct: 158 FEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIPILQD 217
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L V NK ++ AL++SPTREL +Q + + LG + I GG I Q ++
Sbjct: 218 LKV--NK----QSFYALVISPTRELCIQISQNFQALGMNLLINICTIYGGVDIVTQ-SLN 270
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
P+++V+TPGR L H+ L N+K +VFDEAD+L F + ++ LP +
Sbjct: 271 LAKKPNVIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKLLSQDFESSINKLLLILPPN 330
Query: 741 RQTLLFSATLPKMLVXFARAGL 806
R T LFSAT+ K + +A L
Sbjct: 331 RITFLFSATMTKNVAKLKKACL 352
>UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containing
protein; n=1; Babesia bovis|Rep: DEAD/DEAH box helicase
domain containing protein - Babesia bovis
Length = 649
Score = 137 bits (331), Expect = 4e-31
Identities = 87/200 (43%), Positives = 115/200 (57%), Gaps = 11/200 (5%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
+ +GLS ++K + GYK P+ IQ K IP+AL GKD++A A TGSGK+A F++P L++
Sbjct: 127 WSDLGLSRSLIKAVFDMGYKAPSIIQSKVIPVALEGKDLLATAETGSGKSAAFLIPTLQR 186
Query: 384 LL---VPNNKP---TPGKNLR----ALILSPTRELALQTLRFVRELGKFTGLTSAAILGG 533
L+ V K T G N R ALIL PTRELA Q L + I GG
Sbjct: 187 LITAGVIKQKDVDLTRGGNQRVGTKALILLPTRELAAQCYDVFLALTQNLTQNGVLITGG 246
Query: 534 ESIEQQFNVMSGSSPDIVVATPGRFLHICIEM-CLKLDNIKIVVFDEADRLFELGFGEQL 710
+++Q P IV ATPG+ L I + C+ +D I+IVV DEADRL +LGF ++L
Sbjct: 247 VPVKEQ-EAKLRRMPYIVFATPGKVLDIMLNSNCIHMDAIEIVVLDEADRLLDLGFKDEL 305
Query: 711 QEICARLPSSRQTLLFSATL 770
I RQT+LFSATL
Sbjct: 306 AHILQLCNKERQTMLFSATL 325
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 137 bits (331), Expect = 4e-31
Identities = 77/199 (38%), Positives = 114/199 (57%), Gaps = 2/199 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F S L ++ + K GYK PTPIQ+ +IP+ +G+D++A A+TGSGKTA F+LPIL K
Sbjct: 247 FTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSK 306
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
LL ++ G+ + +I+SPTRELA+Q R+ + L + GG S Q N
Sbjct: 307 LLEDPHELELGRP-QVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQ-NEC 364
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR--LPS 737
+V+ATPGR L + ++ + VV DEADR+ ++GF E ++ I +
Sbjct: 365 ITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRP 424
Query: 738 SRQTLLFSATLPKMLVXFA 794
QTL+FSAT P+ + A
Sbjct: 425 EHQTLMFSATFPEEIQRMA 443
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42; n=2;
Arabidopsis thaliana|Rep: DEAD-box ATP-dependent RNA
helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 137 bits (331), Expect = 4e-31
Identities = 75/202 (37%), Positives = 116/202 (57%), Gaps = 4/202 (1%)
Frame = +3
Query: 216 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVP 395
GL+ +L + K Y++P PIQ + +PI ++G+D + +A+TGSGKT FVLP+L +
Sbjct: 535 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH--IK 592
Query: 396 NNKPT-PGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGS 572
+ P G L+++PTREL Q +R+ K G+ + GG + QQ + +
Sbjct: 593 DQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRG 652
Query: 573 SPDIVVATPGRFLHICIEMCLKLDNIKIVVF---DEADRLFELGFGEQLQEICARLPSSR 743
+ +IVV TPGR + I K+ N++ V F DEADR+F++GF Q+ I + R
Sbjct: 653 T-EIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPER 711
Query: 744 QTLLFSATLPKMLVXFARAGLS 809
QT+LFSAT P+ + AR L+
Sbjct: 712 QTVLFSATFPRQVETLARKVLN 733
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 137 bits (331), Expect = 4e-31
Identities = 80/203 (39%), Positives = 119/203 (58%), Gaps = 2/203 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ +G++ + + + G+ +PT IQ + IP+AL G+D++ +A TGSGKT F LPIL
Sbjct: 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGG-ESIEQQFNV 560
LL TP + L AL+L+PTRELA Q LG G+ SA I+GG +S+ Q ++
Sbjct: 86 LL-----ETP-QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQ--SL 137
Query: 561 MSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
P I++ATPGR + H+ L +K +V DEADR+ + F ++ +I +P
Sbjct: 138 ALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR 197
Query: 738 SRQTLLFSATLPKMLVXFARAGL 806
R+T LFSAT+ K + RA L
Sbjct: 198 DRKTFLFSATMTKKVQKLQRAAL 220
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 136 bits (330), Expect = 5e-31
Identities = 74/193 (38%), Positives = 111/193 (57%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F L +++ ++ Y +PTPIQ K IP+AL GKD++A ++TGSGKTA F +PI E
Sbjct: 6 FTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPICES 65
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
++ N P +AL+L PTRELA Q + +G+ + + GG ++Q +
Sbjct: 66 IVWEENLP------QALVLEPTRELAYQVKDEIFNVGRMKRVKVPVVFGGFPFDKQALTL 119
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
S IVV TPGR L C LK N+K V+ DEAD + ++GF + ++ I + LP +
Sbjct: 120 KQKS-HIVVGTPGRVLDHCETGTLKCSNVKYVIIDEADLMLDMGFLDDVKRILSYLPENI 178
Query: 744 QTLLFSATLPKML 782
+LFSAT+ + L
Sbjct: 179 TIMLFSATMGEAL 191
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 136 bits (330), Expect = 5e-31
Identities = 80/207 (38%), Positives = 117/207 (56%), Gaps = 3/207 (1%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
S F S+GL + ++ G+K PT IQ + +P AL G+D++A+A TGSGKTA F LPI
Sbjct: 50 SPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLPI 109
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
L++LL + ALIL+PTREL LQ + + +G G+T ++GG Q
Sbjct: 110 LQRLLQRTQR------FYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQ- 162
Query: 555 NVMSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
+ P +VV +PGR + H+ L ++K++V DEADRL L F LQ + +
Sbjct: 163 AIALAKKPHVVVGSPGRVVDHLQQTKGFSLKSVKVLVLDEADRLLSLDFDAALQVLLEHV 222
Query: 732 --PSSRQTLLFSATLPKMLVXFARAGL 806
P+ RQT+LFSAT+ + +A L
Sbjct: 223 GSPAERQTMLFSATMTTKVSKLQKASL 249
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 136 bits (330), Expect = 5e-31
Identities = 77/196 (39%), Positives = 115/196 (58%), Gaps = 5/196 (2%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F+ GL V+ + K Y +PTPIQR IPI L G+D++A A+TGSGKTA F+LP++
Sbjct: 175 SFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLPMIH 234
Query: 381 KLL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
LL ++ +N +I++PTRELA+Q R+ T L GG +++ Q
Sbjct: 235 HLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGGTAVQHQLQ 294
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEIC--ARL 731
+M G ++VATPGR L + +N+ VV DEADR+ ++GF ++++ A +
Sbjct: 295 LMRGGC-HVLVATPGRLLDFIDRGYVTFENVNFVVLDEADRMLDMGFLPSIEKVMGHATM 353
Query: 732 P--SSRQTLLFSATLP 773
P RQTL+FSAT P
Sbjct: 354 PEKQQRQTLMFSATFP 369
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 136 bits (330), Expect = 5e-31
Identities = 74/199 (37%), Positives = 116/199 (58%), Gaps = 1/199 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ + +S + K + G+++ +PIQ IP L KDV A+TG+GKTA F +P+LE
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLEN 65
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTG-LTSAAILGGESIEQQFNV 560
+ +N NL+A+IL PTRELA+Q +R+L + + + GG+ I++Q
Sbjct: 66 IDSEDN------NLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKA 119
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ I++ TPGR + L L+NIK V+ DEAD + ++GF E ++ I +P
Sbjct: 120 LQ-KGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIEYILEDIPYE 178
Query: 741 RQTLLFSATLPKMLVXFAR 797
RQ LLFSATLP+ ++ A+
Sbjct: 179 RQFLLFSATLPQEILQLAQ 197
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 136 bits (330), Expect = 5e-31
Identities = 80/190 (42%), Positives = 108/190 (56%), Gaps = 1/190 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + L +L+ + +G+ +PT IQ IP AL G+DV+ A TG+GKTA ++LP L+
Sbjct: 6 FSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQH 65
Query: 384 LL-VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
LL P K P R LIL+PTRELA+Q REL K T L A I GG + V
Sbjct: 66 LLDFPRKKSGPP---RILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEV 122
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
S + DIVVAT GR L E ++ ++ DEADR+ ++GF + ++ I
Sbjct: 123 FS-ENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRWR 181
Query: 741 RQTLLFSATL 770
+QTLLFSATL
Sbjct: 182 KQTLLFSATL 191
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 136 bits (330), Expect = 5e-31
Identities = 75/192 (39%), Positives = 113/192 (58%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F++ G +LK I + G+ PTPIQ ++ PIAL +DVVA+A+TGSGKT ++LP
Sbjct: 151 SFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFM 210
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+ N P G + L+L+PTRELA Q L + G+ + ++S + GG Q
Sbjct: 211 HIKRLQNNPRSGPTV--LVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRD 268
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ D+VVATPGR I + L + +V DEADR+ ++GF Q+++I +P
Sbjct: 269 LD-RGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPR 327
Query: 741 RQTLLFSATLPK 776
RQTL+++AT PK
Sbjct: 328 RQTLMYTATWPK 339
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 136 bits (329), Expect = 6e-31
Identities = 76/191 (39%), Positives = 110/191 (57%), Gaps = 2/191 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIAL-TGKDVVAMARTGSGKTACFVLPILE 380
F+ +G+S + K I + GY+ P P+Q + IP L DVVA+A+TG+GKTA F LP+L+
Sbjct: 4 FEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLPLLQ 63
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT-GLTSAAILGGESIEQQFN 557
++ V N P ++LIL PTREL LQ + + K+ GL + GG SI+ Q
Sbjct: 64 QIDVKNRVP------QSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIR 117
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
+ I+VATPGR L + + L + +V DEAD + +GF + + I A +P
Sbjct: 118 SLK-RGVHIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEMLNMGFTDSINAILADVPK 176
Query: 738 SRQTLLFSATL 770
R TLLFSAT+
Sbjct: 177 ERNTLLFSATM 187
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 136 bits (329), Expect = 6e-31
Identities = 75/198 (37%), Positives = 112/198 (56%), Gaps = 1/198 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F ++ L + + I K GY T IQ K IP+AL +D++ + TG+GKT F++PIL+
Sbjct: 3 FNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNSQDIIGKSHTGTGKTVAFIVPILQN 62
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT-GLTSAAILGGESIEQQFNV 560
L +P +A+IL PT ELA Q + VR+ + G+ + I GG I++Q
Sbjct: 63 LNTHLKQP------QAIILCPTHELASQIIEQVRKFATYLEGVNATLICGGSHIQRQIYA 116
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ S+ I+V TPGR L+LD IK +V DEAD + ++GF L ++ P+
Sbjct: 117 LRKSN--IIVGTPGRIADHINRKTLRLDKIKTIVLDEADEMLKMGFKTDLDKVFQNAPNK 174
Query: 741 RQTLLFSATLPKMLVXFA 794
QTLLFSAT+PK ++ A
Sbjct: 175 YQTLLFSATMPKQVLEIA 192
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 136 bits (329), Expect = 6e-31
Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 18/213 (8%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
AF +GLS +L+ I GY PTP+Q +IP+ L G+D++A A+TG+GKTA F+LP +
Sbjct: 47 AFDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLLAAAQTGTGKTAAFLLPTMN 106
Query: 381 KL--LVPNN--KPTPGKNLR--------------ALILSPTRELALQTLRFVRELGKFTG 506
L + P + G+N R L+++PTRELA Q ++ TG
Sbjct: 107 NLEHIAPPKPVRERGGRNRRRGAKKPEGNGRGPVMLVITPTRELAQQIDEVAGKIADVTG 166
Query: 507 LTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLF 686
+ ++GG S + Q + DI+VATPGR + + + LD +K++V DEADR+
Sbjct: 167 HVAVTVVGGVSYKPQTAALKYGC-DILVATPGRLVDLIEQGACHLDEVKVLVLDEADRML 225
Query: 687 ELGFGEQLQEICARLPSSRQTLLFSATLPKMLV 785
++GF ++ I P+ RQTLLFSATL + V
Sbjct: 226 DMGFLPAVRRIVRETPAERQTLLFSATLDEEAV 258
>UniRef50_Q5CWD0 Cluster: Prp5p C terminal KH. eIF4A-1-family RNA
SFII helicase; n=2; Cryptosporidium|Rep: Prp5p C
terminal KH. eIF4A-1-family RNA SFII helicase -
Cryptosporidium parvum Iowa II
Length = 934
Score = 136 bits (329), Expect = 6e-31
Identities = 82/212 (38%), Positives = 117/212 (55%), Gaps = 16/212 (7%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F GL P+ + K+ +P PIQ ++IPI ++G D++ A TGSGKT ++LP++
Sbjct: 224 FSQCGLPLPIHHYLKKKNIIKPFPIQMQSIPILMSGYDMIGNAETGSGKTLAYILPLIRH 283
Query: 384 LLVPNNKPTP---------GKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAIL 527
+LV +N P KN RA+I+ PTRELALQ + +L LT+ I
Sbjct: 284 VLVQSNNNYPFNAEMDIQINKNTNLARAMIIIPTRELALQVYKQTTQLANLVDLTTNIIC 343
Query: 528 GGESIEQQFN-VMSGSSPDIVVATPGRFLHICIEMCLKL---DNIKIVVFDEADRLFELG 695
GG SI Q N + SGS DI++ TPGR + I + K+ I +V DE DRLF++G
Sbjct: 344 GGLSISHQLNKIRSGS--DIIIGTPGRIIDIMTLLHKKIVIFQFISFLVIDEGDRLFDMG 401
Query: 696 FGEQLQEICARLPSSRQTLLFSATLPKMLVXF 791
F QL I + + RQ +FSAT P ++ F
Sbjct: 402 FAPQLLSIISIIRPDRQIAIFSATFPNIIEQF 433
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 136 bits (329), Expect = 6e-31
Identities = 74/198 (37%), Positives = 112/198 (56%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +S + + + G++ TPIQ T+P+ L G DVV A+TG+GKTA F +P+LE
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLEN 65
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L + P +ALI+ PTREL LQ ++ +GK+ + A+ GG+SI Q +
Sbjct: 66 L---EAERVP----QALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQL 118
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
++VATPGR + + L I VV DEAD + +GF + ++ I + +P R
Sbjct: 119 R-RGVHVIVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIDDIERILSHVPERR 177
Query: 744 QTLLFSATLPKMLVXFAR 797
QT+LFSAT+ K ++ AR
Sbjct: 178 QTMLFSATVSKPILRIAR 195
>UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP4 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 859
Score = 136 bits (329), Expect = 6e-31
Identities = 79/211 (37%), Positives = 122/211 (57%), Gaps = 10/211 (4%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + +S KG+ + PTPIQ IP AL +D++ A+TGSGKT F++P+LE+
Sbjct: 62 FSELPMSSKTQKGLKSSHFLNPTPIQSLAIPPALQARDILGSAKTGSGKTLAFLIPLLER 121
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L + P G L A+++SPTRELA+QT +R++GK+ ++ ++GG+ ++++ +
Sbjct: 122 LYLEKWGPMDG--LGAVVISPTRELAVQTFMQLRDIGKYHNFSAGLVIGGKPLKEEQERL 179
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP-- 734
+I++ATPGR L H+ + +K++V DEADRL +LGF L+ I +
Sbjct: 180 --GRMNILIATPGRLLQHLDSTVGFDSSAVKVLVLDEADRLLDLGFLPALKAIVSHFSPV 237
Query: 735 -------SSRQTLLFSATLPKMLVXFARAGL 806
SRQTLLFSAT K L A+ L
Sbjct: 238 QTAPGSRPSRQTLLFSATQSKDLAALAKLSL 268
>UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF15032, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 574
Score = 136 bits (328), Expect = 8e-31
Identities = 79/192 (41%), Positives = 115/192 (59%), Gaps = 1/192 (0%)
Frame = +3
Query: 234 LKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTP 413
LKG+ + G++ T IQ KTI L G+DV+A A+TGSGKT F++P +E L+ K P
Sbjct: 73 LKGVKELGFEHMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPCIE--LIYKLKFMP 130
Query: 414 GKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVA 593
+ILSPTRELA+QT ++EL T I+GG + + ++ + +I+VA
Sbjct: 131 RNGTGVIILSPTRELAMQTYGVMKELMTHHVHTYGLIMGGSNRSAEAQKLA-NGINILVA 189
Query: 594 TPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFSATL 770
TPGR L H+ N++ ++ DEADR+ E+GF E+L++I LP RQT+LFSAT
Sbjct: 190 TPGRLLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKRRQTMLFSATQ 249
Query: 771 PKMLVXFARAGL 806
+ + AR L
Sbjct: 250 TRRVEDLARISL 261
>UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep:
LOC562123 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 483
Score = 136 bits (328), Expect = 8e-31
Identities = 73/186 (39%), Positives = 116/186 (62%), Gaps = 3/186 (1%)
Frame = +3
Query: 225 FPVL--KGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPN 398
FP + K + GY+ PTP+Q + +P+ LTG+DV+A A TGSGKT F+LP++ + L +
Sbjct: 177 FPTVLEKNLKVAGYEAPTPVQMQMVPVGLTGRDVIATADTGSGKTVAFLLPVVMRAL-QS 235
Query: 399 NKPTPGKNLRALILSPTRELALQTLRFVRELGK-FTGLTSAAILGGESIEQQFNVMSGSS 575
+P LIL+PTRELA+Q +EL + + +A ++GG + Q + + +
Sbjct: 236 ESASPSCPA-CLILTPTRELAIQIEEQAKELMRGLPNMGTALLVGGMPLPPQLHRLKHNI 294
Query: 576 PDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 755
IV+ TPGR L I + ++LD+++ VV DEAD + ++GF +Q+ +I ++P QTLL
Sbjct: 295 K-IVIGTPGRLLEILKQKAVQLDHVRTVVVDEADTMLKMGFQQQVLDILEQVPDDHQTLL 353
Query: 756 FSATLP 773
SAT+P
Sbjct: 354 TSATIP 359
>UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=48; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 452
Score = 136 bits (328), Expect = 8e-31
Identities = 78/190 (41%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ +GL +LK + +KQ T IQ++ IP+ + G+D++A ++TGSGKT FVLP+L K
Sbjct: 7 FKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPMLHK 66
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L K K+ R LIL PTRELA Q +R + T+ I GGE+ Q +
Sbjct: 67 SL--KTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKAL 124
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEI-CARLPSS 740
+ P +VATPGR L L+ ++ +V DEADR+ +LGF ++L+ I A
Sbjct: 125 A-RGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRR 183
Query: 741 RQTLLFSATL 770
RQTL+FSATL
Sbjct: 184 RQTLMFSATL 193
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 136 bits (328), Expect = 8e-31
Identities = 78/197 (39%), Positives = 114/197 (57%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F S L + G+ + G++ T +QR T+PIA G DV+ ARTGSGKTA F LPILE+
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILER 66
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
P L+AL+L+PTRELA Q + L GL+ + GG +E+Q +
Sbjct: 67 C-------QPSGKLQALVLAPTRELANQVAQEFELLQGNAGLSIVTVYGGTDLEKQAKTL 119
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+ DI+V TPGR + + + L++ K++ DEADR+ ++GF + I R+ S +
Sbjct: 120 A-KGVDIIVGTPGRVMDMNERGHIDLNSPKMLCLDEADRMLDMGFFPDIMWIVERMTSRQ 178
Query: 744 QTLLFSATLPKMLVXFA 794
QTLLFSAT P+ ++ A
Sbjct: 179 QTLLFSATFPQEIIDAA 195
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 136 bits (328), Expect = 8e-31
Identities = 73/200 (36%), Positives = 118/200 (59%), Gaps = 3/200 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + +L ++ G+ +PTPIQ + IP+ ++ D+VA A+TG+GKTA ++LPIL K
Sbjct: 3 FNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPILHK 62
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILG---GESIEQQF 554
++ N +L L+L PTRELA+Q + + F ++S A+ G G + +QQ
Sbjct: 63 IIESNT-----DSLDTLVLVPTRELAIQIDQQIEGFSYFINVSSIAVYGGGDGATWDQQR 117
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
++ + +IV+ATPGR L L IK +V DEADR+ ++GF + + + + LP
Sbjct: 118 KALTDGA-NIVIATPGRLLAQLQSGTANLKQIKHLVLDEADRMLDMGFYDDIVRVISYLP 176
Query: 735 SSRQTLLFSATLPKMLVXFA 794
+ RQT++FSAT+P + A
Sbjct: 177 TERQTIMFSATMPTKMRALA 196
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 136 bits (328), Expect = 8e-31
Identities = 76/203 (37%), Positives = 119/203 (58%), Gaps = 1/203 (0%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
SS F S+ LS ++K + GY++ T IQ ++P L GKD++A A+TG+GKTA F L
Sbjct: 2 SSKDFASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLG 61
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFT-GLTSAAILGGESIEQ 548
+L KL++ + + ++ LIL PTREL Q + +R+L + + ++ GG
Sbjct: 62 VLSKLVLDDYR------IQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRP 115
Query: 549 QFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR 728
Q ++ + IVV TPGR L + L LD+++ +V DEADR+ ++GF +++ I +
Sbjct: 116 QMKSVAHGA-HIVVGTPGRILKHLNKSSLSLDHVRTLVLDEADRMLDMGFQDEIDAIIDQ 174
Query: 729 LPSSRQTLLFSATLPKMLVXFAR 797
RQTLLFSAT PK + A+
Sbjct: 175 TNKQRQTLLFSATYPKKIATIAK 197
>UniRef50_A7U5X2 Cluster: DEAD-box helicase 15; n=2; Plasmodium
falciparum|Rep: DEAD-box helicase 15 - Plasmodium
falciparum
Length = 717
Score = 136 bits (328), Expect = 8e-31
Identities = 86/204 (42%), Positives = 114/204 (55%), Gaps = 8/204 (3%)
Frame = +3
Query: 219 LSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPN 398
+S P LK + ++ + PT IQR IP+AL GK ++A + TGSGKT FVLPILE+LL
Sbjct: 94 ISRPFLKVLYEQKFSNPTYIQRDVIPLALEGKSILANSETGSGKTLAFVLPILERLLQSV 153
Query: 399 NKPTPGKNL-------RALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFN 557
N N+ +ALIL PTREL+LQ +R L K+ +T + GG I+QQ
Sbjct: 154 NIKMRRNNMKGSYNITKALILLPTRELSLQCYDVIRSLTKYVTITYSLFCGGIDIKQQEY 213
Query: 558 VMSGSSPDIVVATPGRFLHICIEMCLKLDN-IKIVVFDEADRLFELGFGEQLQEICARLP 734
+ DI V TPGR L + + N ++IVVFDEAD+L ELGF E+ +I
Sbjct: 214 EFKKRN-DIFVCTPGRILDLLLNSSSDFINYLEIVVFDEADKLLELGFKEECLKILDVCK 272
Query: 735 SSRQTLLFSATLPKMLVXFARAGL 806
+Q L FSATL + A L
Sbjct: 273 FKKQILFFSATLTSDIKQLANFSL 296
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,411,003
Number of Sequences: 1657284
Number of extensions: 12642575
Number of successful extensions: 36457
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 33033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34277
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69966202150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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