Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_O11
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 252 2e-67
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 252 2e-67
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 158 5e-39
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 143 2e-34
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 134 9e-32
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 132 3e-31
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 131 5e-31
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 129 3e-30
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 128 4e-30
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 128 4e-30
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 128 5e-30
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 128 5e-30
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 128 5e-30
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 128 5e-30
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 128 5e-30
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 128 5e-30
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 126 2e-29
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 126 2e-29
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 126 2e-29
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 125 4e-29
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 124 1e-28
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 124 1e-28
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 124 1e-28
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 123 1e-28
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 119 2e-27
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 119 2e-27
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 118 5e-27
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 118 5e-27
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 118 7e-27
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 117 9e-27
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 113 1e-25
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 113 1e-25
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 111 8e-25
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 110 1e-24
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 108 4e-24
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 107 7e-24
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 107 9e-24
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 107 9e-24
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 105 4e-23
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 103 2e-22
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 99 2e-21
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 99 2e-21
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 85 7e-17
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 83 3e-16
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 80 2e-15
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 74 1e-13
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 70 2e-12
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 58 7e-09
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 47 2e-05
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 46 4e-05
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 45 7e-05
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 45 7e-05
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 44 1e-04
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 37 0.020
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 35 0.079
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 35 0.079
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 32 0.42
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 32 0.42
U40417-6|AAA81415.2| 90|Caenorhabditis elegans Saposin-like pr... 29 5.2
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 29 5.2
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 29 5.2
Z72502-1|CAA96585.2| 430|Caenorhabditis elegans Hypothetical pr... 28 6.9
U39472-8|AAP86618.1| 338|Caenorhabditis elegans Serpentine rece... 28 6.9
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 252 bits (617), Expect = 2e-67
Identities = 124/205 (60%), Positives = 160/205 (78%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
+G +Q +GL V K I K+G+ QPTPIQRKTIP + GKDVVAM+RTGSGKTA FV+P+
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPM 82
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
L+KL + T G +RAL++SPTRELALQT + V+ELG+FTGL A ++GG+ IE+QF
Sbjct: 83 LQKL---KRRDTTG--IRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQF 137
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
+ + +PDI++ATPGR LH+ +EM L+L ++ VVFDEADRLFE+GF +QL E R+P
Sbjct: 138 STIH-ENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIP 196
Query: 735 SSRQTLLFSATLPKMLVXFARAGLS 809
SRQTLLFSATLPKMLV FA+AGL+
Sbjct: 197 ESRQTLLFSATLPKMLVDFAKAGLT 221
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 252 bits (617), Expect = 2e-67
Identities = 124/205 (60%), Positives = 160/205 (78%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
+G +Q +GL V K I K+G+ QPTPIQRKTIP + GKDVVAM+RTGSGKTA FV+P+
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPM 82
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
L+KL + T G +RAL++SPTRELALQT + V+ELG+FTGL A ++GG+ IE+QF
Sbjct: 83 LQKL---KRRDTTG--IRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQF 137
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
+ + +PDI++ATPGR LH+ +EM L+L ++ VVFDEADRLFE+GF +QL E R+P
Sbjct: 138 STIH-ENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIP 196
Query: 735 SSRQTLLFSATLPKMLVXFARAGLS 809
SRQTLLFSATLPKMLV FA+AGL+
Sbjct: 197 ESRQTLLFSATLPKMLVDFAKAGLT 221
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 158 bits (383), Expect = 5e-39
Identities = 85/189 (44%), Positives = 118/189 (62%), Gaps = 1/189 (0%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ LS+ L+G+ Y +PT IQR TI +LTG DVV A+TGSGKT V+P+LE
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L K +P L ALI+SPTRELALQT + +G G + ++GG + + N +
Sbjct: 138 LW--RAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRI 195
Query: 564 SGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
SG +I+V TPGR L H+ + D+++++V DEADR+ ++GF +QL I LP+
Sbjct: 196 SGI--NIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAE 253
Query: 741 RQTLLFSAT 767
RQTLLFSAT
Sbjct: 254 RQTLLFSAT 262
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 143 bits (346), Expect = 2e-34
Identities = 91/227 (40%), Positives = 125/227 (55%), Gaps = 25/227 (11%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F+ M LS +LK + GY PTPIQ+ IP+ALTGKD+ A A TG+GKTA FVLPILE
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILE 208
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+++ +P R L+L PTRELA+Q + R+L F L GG ++ Q
Sbjct: 209 RMIY---RPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAA 265
Query: 561 MSGSSPDIVVATPGRFL-HI---------CIEMCLKLDNI---------------KIVVF 665
+ S PD+VVATPGR + H+ IE+ K NI +++V
Sbjct: 266 LR-SGPDVVVATPGRLIDHLHNSPSFNLSNIEVFFKTPNIPPKKNSRKICKIPNFQVLVL 324
Query: 666 DEADRLFELGFGEQLQEICARLPSSRQTLLFSATLPKMLVXFARAGL 806
DEADR+ E F +Q+ E+ +RQTLLFSAT+ + + A L
Sbjct: 325 DEADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEIDELASMSL 371
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 134 bits (323), Expect = 9e-32
Identities = 77/203 (37%), Positives = 116/203 (57%), Gaps = 1/203 (0%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F +G+S P+ + G+ +P+ IQ+ +P AL GKDV+ +A TGSGKT F +P+L+
Sbjct: 45 SFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQ 104
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
LL + P + L+L+PTRELA Q + LG GL +A I+GG + Q
Sbjct: 105 SLL---DHP---QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMA 158
Query: 561 MSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPS 737
++ P I+VATPGR + H+ L +K ++ DEADR+ + F +L +I +P
Sbjct: 159 LA-RRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPR 217
Query: 738 SRQTLLFSATLPKMLVXFARAGL 806
R+T LFSAT+ K + RA L
Sbjct: 218 ERRTYLFSATMTKKVSKLERASL 240
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 132 bits (319), Expect = 3e-31
Identities = 71/196 (36%), Positives = 115/196 (58%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F+ L +L GI ++G+++P+PIQ +I +ALTG+D++A A+ G+GKT + +P++EK
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
+ +P K ++A+++ PTRELALQT + EL K L GG + +
Sbjct: 105 I-----QPAL-KAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRL 158
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+G + +V+ATPGR L + + K+++ K +V DEAD+L F L + LP R
Sbjct: 159 NG-TVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKER 217
Query: 744 QTLLFSATLPKMLVXF 791
Q +L+SAT P + F
Sbjct: 218 QVMLYSATFPNTVTSF 233
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 131 bits (317), Expect = 5e-31
Identities = 73/197 (37%), Positives = 114/197 (57%), Gaps = 3/197 (1%)
Frame = +3
Query: 216 GLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVP 395
G++ ++ + K Y +PT IQ + IP ++G+DV+ +A+TGSGKT F+LP+ +L
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHIL-D 368
Query: 396 NNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSS 575
+ G A+IL+PTRELA+QT + + K GL A GG I +Q + +
Sbjct: 369 QPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGA 428
Query: 576 PDIVVATPGRFLHICIEMCLKLDNIKIV---VFDEADRLFELGFGEQLQEICARLPSSRQ 746
+IVV TPGR + + K+ N++ V V DEADR+F+ GF Q+ ++ + +Q
Sbjct: 429 -EIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQ 487
Query: 747 TLLFSATLPKMLVXFAR 797
T+LFSAT P+ + AR
Sbjct: 488 TVLFSATFPRHMEALAR 504
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 129 bits (311), Expect = 3e-30
Identities = 73/190 (38%), Positives = 108/190 (56%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F MGL +L+GI G+++P+ IQ++ IP L +DV+A A++G+GKTA F + +L+
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L T + +ALILSPTRELA+Q + V LG + + A +GG ++ + +
Sbjct: 88 L------DTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKL 141
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+V TPGR + L+ IK++V DEAD + GF EQL +I LP
Sbjct: 142 D-YGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGA 200
Query: 744 QTLLFSATLP 773
Q +L SATLP
Sbjct: 201 QVVLLSATLP 210
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 128 bits (310), Expect = 4e-30
Identities = 71/193 (36%), Positives = 110/193 (56%), Gaps = 1/193 (0%)
Frame = +3
Query: 231 VLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLL-VPNNKP 407
+++ I K Y+QPTPIQ IP AL+G+DV+ +A+TGSGKTA ++ P + ++ P+ K
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLK- 334
Query: 408 TPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIV 587
G+ A+I+ PTRELA+Q + ++ K + GG S +Q N + ++V
Sbjct: 335 -AGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMV 393
Query: 588 VATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFSAT 767
V TPGR + + +VFDEADR+F++GF Q++ I + RQ L+FSAT
Sbjct: 394 VCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDRQCLMFSAT 453
Query: 768 LPKMLVXFARAGL 806
+ + AR L
Sbjct: 454 FKQKVERLARDAL 466
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 128 bits (310), Expect = 4e-30
Identities = 72/190 (37%), Positives = 108/190 (56%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F MGL +L+GI G+++P+ IQ++ +P L +DV+A A++G+GKTA F + +L+
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L T + +ALILSPTRELA+Q + V LG + + A +GG ++ + +
Sbjct: 88 L------DTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKL 141
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+V TPGR + L+ IK++V DEAD + GF EQL +I LP
Sbjct: 142 D-YGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGA 200
Query: 744 QTLLFSATLP 773
Q +L SATLP
Sbjct: 201 QVVLLSATLP 210
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 128 bits (309), Expect = 5e-30
Identities = 80/210 (38%), Positives = 118/210 (56%), Gaps = 9/210 (4%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F L+ + K + GY + TPIQ+ +P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 384 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQQ 551
L+ NN T G+ R +IL+PTRELA Q R+ T + + GG ++ +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEIC-- 722
+ G++ I+V T GR H C E +KLD + V DEADR+ + +GFG ++ I
Sbjct: 463 GQIEKGAT--IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
Query: 723 ARLP--SSRQTLLFSATLPKMLVXFARAGL 806
+P +RQTL+FSAT P + ARA L
Sbjct: 521 DSMPRKENRQTLMFSATFPDSVQEAARAFL 550
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 128 bits (309), Expect = 5e-30
Identities = 80/210 (38%), Positives = 118/210 (56%), Gaps = 9/210 (4%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F L+ + K + GY + TPIQ+ +P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 384 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQQ 551
L+ NN T G+ R +IL+PTRELA Q R+ T + + GG ++ +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEIC-- 722
+ G++ I+V T GR H C E +KLD + V DEADR+ + +GFG ++ I
Sbjct: 463 GQIEKGAT--IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
Query: 723 ARLP--SSRQTLLFSATLPKMLVXFARAGL 806
+P +RQTL+FSAT P + ARA L
Sbjct: 521 DSMPRKENRQTLMFSATFPDSVQEAARAFL 550
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 128 bits (309), Expect = 5e-30
Identities = 80/210 (38%), Positives = 118/210 (56%), Gaps = 9/210 (4%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F L+ + K + GY + TPIQ+ +P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 384 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQQ 551
L+ NN T G+ R +IL+PTRELA Q R+ T + + GG ++ +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEIC-- 722
+ G++ I+V T GR H C E +KLD + V DEADR+ + +GFG ++ I
Sbjct: 463 GQIEKGAT--IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNY 520
Query: 723 ARLP--SSRQTLLFSATLPKMLVXFARAGL 806
+P +RQTL+FSAT P + ARA L
Sbjct: 521 DSMPRKENRQTLMFSATFPDSVQEAARAFL 550
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 128 bits (309), Expect = 5e-30
Identities = 76/211 (36%), Positives = 125/211 (59%), Gaps = 13/211 (6%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F G V++ + + GY +PTP+Q+ +IP L +D+++ A+TGSGKTA F+LPI++
Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200
Query: 384 LLV--PNN-KPTPGKNLR------ALILSPTRELALQTLRFVRELGKFTGLTSAAILGG- 533
+L P+ KP N R AL+LSPTRELA+Q + + + + +A + GG
Sbjct: 201 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 260
Query: 534 ESIEQQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQ 713
E+ Q N + + I++ATPGR + I + + L + +V DEADR+ ++GF Q++
Sbjct: 261 ENYRDQVNRLRAGT-HILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIR 319
Query: 714 EICAR-LP--SSRQTLLFSATLPKMLVXFAR 797
+I + +P ++R T +FSAT PK + A+
Sbjct: 320 KIVGQGMPPKTARTTAMFSATFPKEIQVLAK 350
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 128 bits (309), Expect = 5e-30
Identities = 76/211 (36%), Positives = 125/211 (59%), Gaps = 13/211 (6%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F G V++ + + GY +PTP+Q+ +IP L +D+++ A+TGSGKTA F+LPI++
Sbjct: 125 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 184
Query: 384 LLV--PNN-KPTPGKNLR------ALILSPTRELALQTLRFVRELGKFTGLTSAAILGG- 533
+L P+ KP N R AL+LSPTRELA+Q + + + + +A + GG
Sbjct: 185 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 244
Query: 534 ESIEQQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQ 713
E+ Q N + + I++ATPGR + I + + L + +V DEADR+ ++GF Q++
Sbjct: 245 ENYRDQVNRLRAGT-HILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIR 303
Query: 714 EICAR-LP--SSRQTLLFSATLPKMLVXFAR 797
+I + +P ++R T +FSAT PK + A+
Sbjct: 304 KIVGQGMPPKTARTTAMFSATFPKEIQVLAK 334
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 128 bits (309), Expect = 5e-30
Identities = 76/211 (36%), Positives = 125/211 (59%), Gaps = 13/211 (6%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F G V++ + + GY +PTP+Q+ +IP L +D+++ A+TGSGKTA F+LPI++
Sbjct: 122 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 181
Query: 384 LLV--PNN-KPTPGKNLR------ALILSPTRELALQTLRFVRELGKFTGLTSAAILGG- 533
+L P+ KP N R AL+LSPTRELA+Q + + + + +A + GG
Sbjct: 182 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 241
Query: 534 ESIEQQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQ 713
E+ Q N + + I++ATPGR + I + + L + +V DEADR+ ++GF Q++
Sbjct: 242 ENYRDQVNRLRAGT-HILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIR 300
Query: 714 EICAR-LP--SSRQTLLFSATLPKMLVXFAR 797
+I + +P ++R T +FSAT PK + A+
Sbjct: 301 KIVGQGMPPKTARTTAMFSATFPKEIQVLAK 331
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 126 bits (303), Expect = 2e-29
Identities = 66/182 (36%), Positives = 107/182 (58%), Gaps = 3/182 (1%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
++ G V + + + GY +PTPIQR+ IPI L +DV+ +A TGSGKTA F+LP+L
Sbjct: 303 WEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVW 362
Query: 384 LL-VPNNKPTPGKNL--RALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF 554
+ +P + ++L A+I++PTRELA Q + GK G+ + +++GG S E Q
Sbjct: 363 ITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQ- 421
Query: 555 NVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLP 734
+ ++V+ATPGR L + L L+ V+ DEADR+ ++GF +Q++ +P
Sbjct: 422 GMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYMP 481
Query: 735 SS 740
+
Sbjct: 482 DT 483
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 126 bits (303), Expect = 2e-29
Identities = 74/208 (35%), Positives = 120/208 (57%), Gaps = 9/208 (4%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F + + + + + GY + TPIQ+ T+P+ GKD++A A+TGSGKTA F+LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 381 KLLVP---NNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQ 548
+L++ N G R +IL+PTRELA Q R+ + + + GG ++
Sbjct: 359 RLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYN 418
Query: 549 QFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEIC- 722
+ +M G + I+V T GR H C + +KLD + +V DEADR+ + +GFG ++++I
Sbjct: 419 KSQIMKGCT--IIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIIN 476
Query: 723 -ARLPSS--RQTLLFSATLPKMLVXFAR 797
+P + RQT++FSAT P + AR
Sbjct: 477 YKNMPKNDKRQTMMFSATFPSSVQEAAR 504
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 126 bits (303), Expect = 2e-29
Identities = 74/208 (35%), Positives = 120/208 (57%), Gaps = 9/208 (4%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F + + + + + GY + TPIQ+ T+P+ GKD++A A+TGSGKTA F+LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 381 KLLVP---NNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQ 548
+L++ N G R +IL+PTRELA Q R+ + + + GG ++
Sbjct: 359 RLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYN 418
Query: 549 QFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEIC- 722
+ +M G + I+V T GR H C + +KLD + +V DEADR+ + +GFG ++++I
Sbjct: 419 KSQIMKGCT--IIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIIN 476
Query: 723 -ARLPSS--RQTLLFSATLPKMLVXFAR 797
+P + RQT++FSAT P + AR
Sbjct: 477 YKNMPKNDKRQTMMFSATFPSSVQEAAR 504
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 125 bits (301), Expect = 4e-29
Identities = 72/180 (40%), Positives = 110/180 (61%), Gaps = 1/180 (0%)
Frame = +3
Query: 231 VLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPT 410
+LK + G+ T IQ K+I L GKDV+A A+TGSGKT F+LP +E L N K
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 411 PGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVV 590
G + +I+SPTREL++QT + EL + + LT ++GG + + + ++ I+V
Sbjct: 139 NGTGV--IIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLA-KGVSILV 195
Query: 591 ATPGRFL-HICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFSAT 767
ATPGR L H+ + N+K ++ DEADR+ ++GF ++Q++ LP RQ++LFSAT
Sbjct: 196 ATPGRLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSAT 255
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 124 bits (298), Expect = 1e-28
Identities = 77/207 (37%), Positives = 114/207 (55%), Gaps = 9/207 (4%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F L + K + GY + TPIQ+ T+P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 384 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQQ 551
L+ N+ T G+ R +IL+PTREL Q R+ T + + GG ++ +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEIC-- 722
+ G++ I+V T GR H C E +KLD + V DEADR+ + +GFG + I
Sbjct: 674 GQIEKGAT--IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
Query: 723 ARLP--SSRQTLLFSATLPKMLVXFAR 797
+P +RQTL+FSAT P + AR
Sbjct: 732 ESMPKKENRQTLMFSATFPDSVQEAAR 758
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 124 bits (298), Expect = 1e-28
Identities = 77/207 (37%), Positives = 114/207 (55%), Gaps = 9/207 (4%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F L + K + GY + TPIQ+ T+P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 384 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQQ 551
L+ N+ T G+ R +IL+PTREL Q R+ T + + GG ++ +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEIC-- 722
+ G++ I+V T GR H C E +KLD + V DEADR+ + +GFG + I
Sbjct: 674 GQIEKGAT--IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
Query: 723 ARLP--SSRQTLLFSATLPKMLVXFAR 797
+P +RQTL+FSAT P + AR
Sbjct: 732 ESMPKKENRQTLMFSATFPDSVQEAAR 758
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 124 bits (298), Expect = 1e-28
Identities = 77/207 (37%), Positives = 114/207 (55%), Gaps = 9/207 (4%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F L + K + GY + TPIQ+ T+P+ G D++A A+TGSGKTA F+LPI+ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 384 LLVPNNKPTPGKN---LRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESI-EQQ 551
L+ N+ T G+ R +IL+PTREL Q R+ T + + GG ++ +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEIC-- 722
+ G++ I+V T GR H C E +KLD + V DEADR+ + +GFG + I
Sbjct: 674 GQIEKGAT--IIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNY 731
Query: 723 ARLP--SSRQTLLFSATLPKMLVXFAR 797
+P +RQTL+FSAT P + AR
Sbjct: 732 ESMPKKENRQTLMFSATFPDSVQEAAR 758
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 123 bits (297), Expect = 1e-28
Identities = 75/213 (35%), Positives = 124/213 (58%), Gaps = 15/213 (7%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F + L + + I GY +PTP+Q+ +IP G+D+++ A+TGSGKTA F++P++
Sbjct: 168 FSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNA 227
Query: 384 LL------VPNNKPTPGKNLR----ALILSPTRELALQTLRFVRELGKFTGLTSAAILGG 533
+L V + + G + AL+LSPTREL+LQ R+ T +TSA + GG
Sbjct: 228 ILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGG 287
Query: 534 -ESIEQQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQL 710
E+ + Q + + I++ATPGR + + + + ++ + +V DEADR+ ++GF Q+
Sbjct: 288 RENYKDQIHKLR-LGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQI 346
Query: 711 QEI--CARLPS--SRQTLLFSATLPKMLVXFAR 797
++I C R+PS R T +FSAT PK + A+
Sbjct: 347 RQIVECNRMPSKEERITAMFSATFPKEIQLLAQ 379
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 119 bits (287), Expect = 2e-27
Identities = 66/191 (34%), Positives = 109/191 (57%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F M L +L+GI G+++P+ IQ++ I TGKDV+A A++G+GKTA F + IL+
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQ 89
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+ + + P +++AL+++PTRELA Q + + LG++ + +GG S+
Sbjct: 90 R--IDHEDP----HVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRK 143
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ + +VV TPGR + L IK+ V DEAD + GF +Q+ E+ +P
Sbjct: 144 LE-AGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQD 202
Query: 741 RQTLLFSATLP 773
Q +L SAT+P
Sbjct: 203 VQVVLLSATMP 213
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 119 bits (287), Expect = 2e-27
Identities = 66/191 (34%), Positives = 109/191 (57%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
+F M L +L+GI G+++P+ IQ++ I TGKDV+A A++G+GKTA F + IL+
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQ 89
Query: 381 KLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNV 560
+ + + P +++AL+++PTRELA Q + + LG++ + +GG S+
Sbjct: 90 R--IDHEDP----HVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRK 143
Query: 561 MSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSS 740
+ + +VV TPGR + L IK+ V DEAD + GF +Q+ E+ +P
Sbjct: 144 LE-AGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQD 202
Query: 741 RQTLLFSATLP 773
Q +L SAT+P
Sbjct: 203 VQVVLLSATMP 213
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 118 bits (284), Expect = 5e-27
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 2/198 (1%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
S F+ L +L+ I G++ P+ +Q + IP A+ G DVV A++G GKTA FV+
Sbjct: 40 SSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITT 99
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQQ 551
L++L +P G+ + + + TRELA Q + K+ G+ A GG +I++
Sbjct: 100 LQQL-----EPVDGE-VSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKD 153
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLF-ELGFGEQLQEICAR 728
++ P IVV TPGR L + LKLD +K V DE D++ + +QEI
Sbjct: 154 EERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKM 213
Query: 729 LPSSRQTLLFSATLPKML 782
P +Q ++FSATLPK L
Sbjct: 214 TPQQKQVMMFSATLPKEL 231
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 118 bits (284), Expect = 5e-27
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 2/198 (1%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
S F+ L +L+ I G++ P+ +Q + IP A+ G DVV A++G GKTA FV+
Sbjct: 40 SSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITT 99
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQQ 551
L++L +P G+ + + + TRELA Q + K+ G+ A GG +I++
Sbjct: 100 LQQL-----EPVDGE-VSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKD 153
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLF-ELGFGEQLQEICAR 728
++ P IVV TPGR L + LKLD +K V DE D++ + +QEI
Sbjct: 154 EERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKM 213
Query: 729 LPSSRQTLLFSATLPKML 782
P +Q ++FSATLPK L
Sbjct: 214 TPQQKQVMMFSATLPKEL 231
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 118 bits (283), Expect = 7e-27
Identities = 66/173 (38%), Positives = 98/173 (56%)
Frame = +3
Query: 258 YKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALI 437
+++PT IQ + PIA++G+D++++A+TGSGKT F+LP L + ++ G+ L+
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQR-GEGPAVLV 207
Query: 438 LSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHI 617
L PTRELA Q + GL + GG S Q + DIVVATPGR L
Sbjct: 208 LLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLE-RGVDIVVATPGRLLDF 266
Query: 618 CIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLLFSATLPK 776
+ +V DEADR+ ++GF Q+++I ++ RQTL+FSAT PK
Sbjct: 267 LDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPK 319
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 117 bits (282), Expect = 9e-27
Identities = 80/213 (37%), Positives = 121/213 (56%), Gaps = 10/213 (4%)
Frame = +3
Query: 198 GAFQSMGLSFPVLKGITK-RGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
G+F M +L+ + K +G PT IQ + IP+AL+G+D++ +A TGSGKT FVLP+
Sbjct: 189 GSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPL 248
Query: 375 LEKLLVPNNK-P-TPGKNLRALILSPTRELALQTLRFVRE----LGK--FTGLTSAAILG 530
+ L K P + LI+ P+RELA Q + E LGK + + +G
Sbjct: 249 VMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIG 308
Query: 531 GESI-EQQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQ 707
G I EQ +V G IVVATPGR + + + L+ + +V DEADR+ ++GF ++
Sbjct: 309 GVPIGEQAKDVRDGIH--IVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDE 366
Query: 708 LQEICARLPSSRQTLLFSATLPKMLVXFARAGL 806
++ I + RQTLLFSAT+P+ + FA++ L
Sbjct: 367 IKSIFYFFKAQRQTLLFSATMPRKIQFFAKSAL 399
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 113 bits (273), Expect = 1e-25
Identities = 75/194 (38%), Positives = 102/194 (52%), Gaps = 5/194 (2%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +G+ + + + K TP+Q IP L G D++ ARTG+GKT F +PIL+K
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L V + ALIL+PTRELA Q LGK L + I+GG S+ Q +
Sbjct: 151 LSV------DPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQAREL 204
Query: 564 SGSSPDIVVATPGRFLHICIE-----MCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR 728
S P +VVATPGR + IE + I+ V DEADR+ E + +QL+ I
Sbjct: 205 S-ERPHVVVATPGRLADL-IESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFES 262
Query: 729 LPSSRQTLLFSATL 770
+ RQTLL SAT+
Sbjct: 263 ISEKRQTLLLSATI 276
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 113 bits (273), Expect = 1e-25
Identities = 75/194 (38%), Positives = 102/194 (52%), Gaps = 5/194 (2%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +G+ + + + K TP+Q IP L G D++ ARTG+GKT F +PIL+K
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L V + ALIL+PTRELA Q LGK L + I+GG S+ Q +
Sbjct: 151 LSV------DPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQAREL 204
Query: 564 SGSSPDIVVATPGRFLHICIE-----MCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR 728
S P +VVATPGR + IE + I+ V DEADR+ E + +QL+ I
Sbjct: 205 S-ERPHVVVATPGRLADL-IESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFES 262
Query: 729 LPSSRQTLLFSATL 770
+ RQTLL SAT+
Sbjct: 263 ISEKRQTLLLSATI 276
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 111 bits (266), Expect = 8e-25
Identities = 66/195 (33%), Positives = 105/195 (53%), Gaps = 5/195 (2%)
Frame = +3
Query: 207 QSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL--- 377
Q+ G + ++ I K G+++P+PIQ + P+ L+G+D + +++TGSGKT F+LP L
Sbjct: 87 QAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHI 146
Query: 378 --EKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 551
+ N + L+LSPTRELA Q V++ + G S + GG S +Q
Sbjct: 147 DAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKY-SYNGYKSVCLYGGGSRPEQ 205
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
G +IV+ATPGR + + + L ++ VV DEADR+ ++GF ++ I +
Sbjct: 206 VEACRG-GVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEI 264
Query: 732 PSSRQTLLFSATLPK 776
R L SAT P+
Sbjct: 265 RPDRLVALTSATWPE 279
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 110 bits (265), Expect = 1e-24
Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 16/196 (8%)
Frame = +3
Query: 231 VLKGITKRGYKQPTPIQRKTIPIALTGK-DVVAMARTGSGKTACFVLPILEKLLVPNN-- 401
VL+ I + G+ +PT IQ +P A+ + DV+ A TGSGKT F +P++ +LL ++
Sbjct: 166 VLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDS 225
Query: 402 ---KPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGS 572
+ T + RALI++PTREL +Q ++ + L T L + +I+GG + +Q ++S
Sbjct: 226 QETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQ 285
Query: 573 SPDIVVATPGRFLHICIE-----MCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL-- 731
PDIVVATPGR + E + ++K +V DE DR+ E G+ +L I ++
Sbjct: 286 RPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHE 345
Query: 732 ---PSSRQTLLFSATL 770
QTL+FSATL
Sbjct: 346 ESEKEKLQTLVFSATL 361
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 108 bits (260), Expect = 4e-24
Identities = 65/187 (34%), Positives = 103/187 (55%), Gaps = 4/187 (2%)
Frame = +3
Query: 228 PVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKP 407
P L + + YK T +Q + L DVV + TGSGKT FVLP++ ++ N K
Sbjct: 19 PELLEVFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMR--MIQNAKL 76
Query: 408 TPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIV 587
P ++ ALILSP+REL Q + ++ + LT + GG+ +++ + + +I+
Sbjct: 77 QPA-DIGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIKMFKNKNVNIL 135
Query: 588 VATPGRFLHICIE----MCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTLL 755
VATPGR I + K+ ++++V DEADR E+ F + ++EI + +P R+T L
Sbjct: 136 VATPGRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGL 195
Query: 756 FSATLPK 776
FSAT K
Sbjct: 196 FSATQVK 202
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 107 bits (258), Expect = 7e-24
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 2/198 (1%)
Frame = +3
Query: 195 SGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPI 374
S F+ L +L+ I G++ P+ +Q + IP A+ G DVV A++G GKTA FV+
Sbjct: 39 SSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITT 98
Query: 375 LEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKF-TGLTSAAILGGESIEQQ 551
L++L +P G+ + + + TRELA Q + K+ G+ A GG +I++
Sbjct: 99 LQQL-----EPVDGE-VSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKD 152
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLF-ELGFGEQLQEICAR 728
++ P IVV TPGR L + LKLD +K V DE D++ + +QEI
Sbjct: 153 EERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEI--- 209
Query: 729 LPSSRQTLLFSATLPKML 782
+Q ++FSATLPK L
Sbjct: 210 ----KQVMMFSATLPKEL 223
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 107 bits (257), Expect = 9e-24
Identities = 57/197 (28%), Positives = 107/197 (54%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
S+ F+S+ + L+ + + +P+P+Q + IP+ L G+D++ A++G+GKT F
Sbjct: 20 SNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVF--- 76
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 551
+L N + +++ +I++PTRE+++Q VR++ TG ++ +GG + +
Sbjct: 77 ---SVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLN 132
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
+ + P IV+ TPGR + + + ++ V DEAD+L + F + + I L
Sbjct: 133 LIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSL 192
Query: 732 PSSRQTLLFSATLPKML 782
P RQ +FSAT P+ L
Sbjct: 193 PQIRQVAVFSATYPRNL 209
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 107 bits (257), Expect = 9e-24
Identities = 57/197 (28%), Positives = 107/197 (54%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLP 371
S+ F+S+ + L+ + + +P+P+Q + IP+ L G+D++ A++G+GKT F
Sbjct: 20 SNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVF--- 76
Query: 372 ILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 551
+L N + +++ +I++PTRE+++Q VR++ TG ++ +GG + +
Sbjct: 77 ---SVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKLN 132
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL 731
+ + P IV+ TPGR + + + ++ V DEAD+L + F + + I L
Sbjct: 133 LIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSL 192
Query: 732 PSSRQTLLFSATLPKML 782
P RQ +FSAT P+ L
Sbjct: 193 PQIRQVAVFSATYPRNL 209
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 105 bits (252), Expect = 4e-23
Identities = 60/189 (31%), Positives = 101/189 (53%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F GL +LK I + G+++ +Q I +AL K+++ ARTGSGKT F++P+++K
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 384 LLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVM 563
L+ + A+I++PT+EL Q + +L + A L + E++ +V
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINL-CDINEEENSVW 209
Query: 564 SGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSR 743
+VV TPG+ L +C + +V DEAD L G+ E++ +I ++LP +
Sbjct: 210 LEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTY 269
Query: 744 QTLLFSATL 770
Q L+ SATL
Sbjct: 270 QCLMTSATL 278
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 103 bits (247), Expect = 2e-22
Identities = 67/187 (35%), Positives = 105/187 (56%), Gaps = 16/187 (8%)
Frame = +3
Query: 258 YKQPTPIQRKTIPIALTGK-DVVAMARTGSGKTACFVLPILEKLLVPNN-----KPTPGK 419
+ +PT IQ +P A+ + DV+ A TGSGKT F +P++ +LL ++ + T +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 420 NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATP 599
RALI++PTREL +Q ++ + L T L + +I+GG + +Q ++S PDIVVATP
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATP 127
Query: 600 GRFLHICIE-----MCLKLDNIKIVVFDEADRLFELGFGEQLQEICARL-----PSSRQT 749
GR + E + ++K +V DE DR+ E G+ +L I ++ QT
Sbjct: 128 GRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHEESEKEKLQT 187
Query: 750 LLFSATL 770
L+FSATL
Sbjct: 188 LVFSATL 194
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 99 bits (238), Expect = 2e-21
Identities = 73/185 (39%), Positives = 100/185 (54%), Gaps = 12/185 (6%)
Frame = +3
Query: 264 QPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLL--------VPNNKPTPGK 419
+PTPIQR + + G DVVA A TGSGKT F++P + KL+ V + KP+P
Sbjct: 758 RPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSP-- 815
Query: 420 NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF-NVMSGSSPDIVVAT 596
R LI++PTREL QT R+L TGL GG S ++ S S +I+VAT
Sbjct: 816 --RLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVAT 873
Query: 597 PGRFLHICIEMCLKLDNIKIVVFDEADRLFELG-FGEQLQEICARLPSSR--QTLLFSAT 767
GR + L +K +V DEADR+ + FGE++ +I P R QT+LFSA+
Sbjct: 874 MGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGS-PGERTQQTVLFSAS 932
Query: 768 LPKML 782
+ L
Sbjct: 933 FSEDL 937
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 99 bits (238), Expect = 2e-21
Identities = 73/185 (39%), Positives = 100/185 (54%), Gaps = 12/185 (6%)
Frame = +3
Query: 264 QPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLL--------VPNNKPTPGK 419
+PTPIQR + + G DVVA A TGSGKT F++P + KL+ V + KP+P
Sbjct: 758 RPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSP-- 815
Query: 420 NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF-NVMSGSSPDIVVAT 596
R LI++PTREL QT R+L TGL GG S ++ S S +I+VAT
Sbjct: 816 --RLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVAT 873
Query: 597 PGRFLHICIEMCLKLDNIKIVVFDEADRLFELG-FGEQLQEICARLPSSR--QTLLFSAT 767
GR + L +K +V DEADR+ + FGE++ +I P R QT+LFSA+
Sbjct: 874 MGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGS-PGERTQQTVLFSAS 932
Query: 768 LPKML 782
+ L
Sbjct: 933 FSEDL 937
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 84.6 bits (200), Expect = 7e-17
Identities = 55/167 (32%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
++ + GL +L+ + + Y IQ IP L G DV+ A T +GKTA F LPI++
Sbjct: 382 SWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIID 441
Query: 381 KLL----VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQ 548
K+L NK ALIL+PTRELA Q +R + T + G +
Sbjct: 442 KILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRAR 501
Query: 549 QFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFE 689
N + DI++ T GR + ++ + L +++ +VFDEADRL +
Sbjct: 502 SLNEIRNGC-DILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQ 547
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 82.6 bits (195), Expect = 3e-16
Identities = 56/171 (32%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Frame = +3
Query: 204 FQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEK 383
F +S +L +++ +QP+PIQ ++IP ++V+A A TGSGKT F LP++++
Sbjct: 128 FSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDE 187
Query: 384 LLVPNNK----PTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQ 551
+L + + L A++L PTRELA QT + T + SAA GE + Q
Sbjct: 188 ILELKQRADYSSSNSSKLLAVVLEPTRELAAQTYTEFLKYCANTSI-SAANFSGEETDIQ 246
Query: 552 FNVMSGSSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGE 704
DI+V+TP R + + + +++ +V DE+DRLFE+ G+
Sbjct: 247 -------HADILVSTPNRIVFHLDK--IDTSSLRWLVVDESDRLFEVVEGQ 288
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 79.8 bits (188), Expect = 2e-15
Identities = 53/187 (28%), Positives = 95/187 (50%)
Frame = +3
Query: 213 MGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLV 392
M L +L+GI G+++P+ IQ+ + TGKDV ++ GSGKT ++ IL+ +
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGI-- 58
Query: 393 PNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGS 572
+L+ ++L+P R +A + ++ LG+ + +A LG ++ + +
Sbjct: 59 ----DCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNV-NATCLGFDTTAENDKI---- 109
Query: 573 SPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQTL 752
+++ TP FL + IK+ V DEAD + GF +Q+ E+ +P Q +
Sbjct: 110 -SHVLMGTPKDFLS---NIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVV 165
Query: 753 LFSATLP 773
L SAT+P
Sbjct: 166 LLSATMP 172
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 74.1 bits (174), Expect = 1e-13
Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 9/210 (4%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTG--KDVVAMARTGSGKTACFV 365
S +F+ + L VLK + ++ PT IQ +P+ L +++A A++G+GKTA FV
Sbjct: 207 SISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFV 266
Query: 366 LPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSA--AILGGES 539
L +L ++ V N P + + L+PT ELA Q V ++GKF AI GG
Sbjct: 267 LTMLCRIDV--NLMCP----QCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 320
Query: 540 IEQQFNVMSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEAD-RLFELGFGE--- 704
+ + + IV+ TPG ++ C+ I+ +V DEAD ++ GF +
Sbjct: 321 AAMRGRKL---TEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDIST 377
Query: 705 QLQEICARLPSSRQTLLFSATLPKMLVXFA 794
+ + S Q++LFSAT + ++ FA
Sbjct: 378 TIYNMVEDASDSVQSMLFSATYDEPVINFA 407
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 74.1 bits (174), Expect = 1e-13
Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 9/210 (4%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTG--KDVVAMARTGSGKTACFV 365
S +F+ + L VLK + ++ PT IQ +P+ L +++A A++G+GKTA FV
Sbjct: 232 SISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFV 291
Query: 366 LPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSA--AILGGES 539
L +L ++ V N P + + L+PT ELA Q V ++GKF AI GG
Sbjct: 292 LTMLCRIDV--NLMCP----QCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 345
Query: 540 IEQQFNVMSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEAD-RLFELGFGE--- 704
+ + + IV+ TPG ++ C+ I+ +V DEAD ++ GF +
Sbjct: 346 AAMRGRKL---TEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDIST 402
Query: 705 QLQEICARLPSSRQTLLFSATLPKMLVXFA 794
+ + S Q++LFSAT + ++ FA
Sbjct: 403 TIYNMVEDASDSVQSMLFSATYDEPVINFA 432
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 74.1 bits (174), Expect = 1e-13
Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 9/210 (4%)
Frame = +3
Query: 192 SSGAFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTG--KDVVAMARTGSGKTACFV 365
S +F+ + L VLK + ++ PT IQ +P+ L +++A A++G+GKTA FV
Sbjct: 616 SISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFV 675
Query: 366 LPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSA--AILGGES 539
L +L ++ V N P + + L+PT ELA Q V ++GKF AI GG
Sbjct: 676 LTMLCRIDV--NLMCP----QCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 729
Query: 540 IEQQFNVMSGSSPDIVVATPGRFL-HICIEMCLKLDNIKIVVFDEAD-RLFELGFGE--- 704
+ + + IV+ TPG ++ C+ I+ +V DEAD ++ GF +
Sbjct: 730 AAMRGRKL---TEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDIST 786
Query: 705 QLQEICARLPSSRQTLLFSATLPKMLVXFA 794
+ + S Q++LFSAT + ++ FA
Sbjct: 787 TIYNMVEDASDSVQSMLFSATYDEPVINFA 816
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 70.1 bits (164), Expect = 2e-12
Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
Frame = +3
Query: 294 PIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTL 473
P L +DV A TGSGKT C+VLP+L + +KP+ K L+A+IL P + L Q +
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAV---GSKPS--KILQAVILVPVQTLVAQIV 205
Query: 474 RFVRELGKFTGLTSAAIL-GGESIEQQFNVMSGSSPDIVVATPGRFL-HIC--IEMCLKL 641
+ +G+ L G E++ ++ P+++VATP R + H+ I + L
Sbjct: 206 DEFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPPPIDL 265
Query: 642 DNIKIVVFDEADRLFEL 692
++ ++ DEADR+ +L
Sbjct: 266 SKLRFLIVDEADRMGKL 282
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 58.0 bits (134), Expect = 7e-09
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Frame = +3
Query: 393 PNNKPTPGK-NLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSG 569
P +K G A+I++PT+EL Q + +L + A L + E++ +V
Sbjct: 86 PEHKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDIN-EEENSVWLE 144
Query: 570 SSPDIVVATPGRFLHICIEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICARLPSSRQT 749
+VV TPG+ L +C + +V DEAD L G+ E++ +I ++LP + Q
Sbjct: 145 DRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQC 204
Query: 750 LLFSATL 770
L+ SATL
Sbjct: 205 LMTSATL 211
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +3
Query: 201 AFQSMGLSFPVLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE 380
AF+ G+ + ++ + PT +Q + IP L G D + A TGSGKT F LPI +
Sbjct: 3 AFEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
Score = 42.7 bits (96), Expect = 3e-04
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Frame = +3
Query: 432 LILSPTRELALQTLRFVRELGKFTG---LTSAAILGGESIEQQFNVMSGSSPDIVVATPG 602
+IL PTREL QT + ++ + + GE++ Q + + DIVV TP
Sbjct: 285 VILEPTRELVQQTFQNIQTFASVLDSPKIRCVTLAAGENMNQILRTLE-TGCDIVVGTPS 343
Query: 603 RFLHICIEMCLKLDNIKIVVFDEADRLF--ELGFGEQLQEICARLP------SSRQTLLF 758
R + L N++ VV DE D+ + Q++ I LP + RQ +
Sbjct: 344 RVFDLIHTGKLATKNLQFVVIDEIDQFLAGKNNCAHQIESIFRVLPLVAQDGTRRQVIAC 403
Query: 759 SATL 770
SATL
Sbjct: 404 SATL 407
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 45.6 bits (103), Expect = 4e-05
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 12/176 (6%)
Frame = +3
Query: 276 IQRKTIPIALTGKDVVAMARTGSGKTACFVLPILE-----KLLVPNNKPTPGKNLRALIL 440
+Q+K+I + ++ A TG GKT F++P +E + L+ N TP + LIL
Sbjct: 118 VQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTI--LIL 175
Query: 441 SPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSP--DIVVATPGRFLH 614
+ T L Q L + + IE+ + DI T G+
Sbjct: 176 ANTNSLVEQLFNRCEVLLGLIDMEDIIPIRDIKIEKLVASYQFTKDQCDIAFCTMGKLKA 235
Query: 615 ICIEMCLKLDNIKIVVFDEADRLFELG-FGEQLQEICARLPS----SRQTLLFSAT 767
+ + LDN+K+++ DE+D++ ++ FG + + +L + Q+ FSA+
Sbjct: 236 SIEDKTILLDNLKMMILDESDKMIDIACFGNDIDWVLDQLQEDVLRNLQSCFFSAS 291
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 44.8 bits (101), Expect = 7e-05
Identities = 35/123 (28%), Positives = 58/123 (47%)
Frame = +3
Query: 279 QRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTREL 458
Q + +AL GK+ + A TGSGKT I E ++ + GK +AL ++P +
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHF---ESRSSEGKRFKALFMTPNSMI 353
Query: 459 ALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHICIEMCLK 638
Q + T I G +++ + NV+ S D++VATP +++C E
Sbjct: 354 LNQQAASISSYLDHVYHTQ-IIQGSDNVPTR-NVI--QSKDLIVATPQMIVNLCNEHRNS 409
Query: 639 LDN 647
LD+
Sbjct: 410 LDD 412
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 44.8 bits (101), Expect = 7e-05
Identities = 35/123 (28%), Positives = 58/123 (47%)
Frame = +3
Query: 279 QRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTREL 458
Q + +AL GK+ + A TGSGKT I E ++ + GK +AL ++P +
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKTVIAANIIKEHF---ESRSSEGKRFKALFMTPNSMI 353
Query: 459 ALQTLRFVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHICIEMCLK 638
Q + T I G +++ + NV+ S D++VATP +++C E
Sbjct: 354 LNQQAASISSYLDHVYHTQ-IIQGSDNVPTR-NVI--QSKDLIVATPQMIVNLCNEHRNS 409
Query: 639 LDN 647
LD+
Sbjct: 410 LDD 412
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 44.0 bits (99), Expect = 1e-04
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Frame = +3
Query: 276 IQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNN-------KPTPGKNLRAL 434
+Q+ +I + G+ +V A TG GKT F++P +E L KP+P L
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQSNCFEYTKPSPS----IL 174
Query: 435 ILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF--NVMSGSSPDIVVATPGRF 608
I++ T L Q + + + + I++ + + DI T G+
Sbjct: 175 IMASTSALVDQLFNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIGKL 234
Query: 609 LHI--CIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEICARLPSSR----QTLLFSAT 767
C ++CL DN+K ++ DEAD++ + FG + I +L Q+ FSAT
Sbjct: 235 KATIECGDVCL--DNLKTIILDEADKMIDNCAFGPDINWILDQLKEENLENLQSCFFSAT 292
Query: 768 LPK 776
K
Sbjct: 293 YNK 295
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 42.7 bits (96), Expect = 3e-04
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Frame = +3
Query: 231 VLKGITKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLL------- 389
++ G+TK ++ +Q+ +I + G+ +V A TG GKT F++P +E L
Sbjct: 7 LIPGVTKTVKRR---VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNC 63
Query: 390 VPNNKPTPGKNLRALILSPTRELALQTLRFVRELGKFTGLTSAAILGGESIEQQF--NVM 563
+ KP+P LI++ T L Q + + + + I++ +
Sbjct: 64 FESTKPSPS----ILIMASTSALVDQLFNRCELILGLQCMDNVEPIRDIKIDKLVANHPF 119
Query: 564 SGSSPDIVVATPGRFLHI--CIEMCLKLDNIKIVVFDEADRLFE-LGFGEQLQEICARLP 734
+ DI T G+ C ++CL DN+K ++ DEAD++ + F + I +L
Sbjct: 120 TKGQCDIAFCTIGKLKATIECGDVCL--DNLKTIILDEADKMIDNCAFVPDINWILDQLK 177
Query: 735 SSR----QTLLFSATLPK 776
Q+ FSAT K
Sbjct: 178 EENLENLQSCFFSATYNK 195
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 36.7 bits (81), Expect = 0.020
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
Frame = +3
Query: 255 GYKQPTPIQRKTIPIAL-TGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRA 431
G+K PIQ + + ++V+ A GSGKTA L +L N P +A
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHF---ENTP----EAKA 1370
Query: 432 LILSPTRELALQTLR-FVRELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRF 608
+ ++P ++A + + R L G T + G EQ ++ ++++TP R+
Sbjct: 1371 VYITPMEDMATKVYADWKRRLEPAIGHTIVLLTG----EQTMDLKLAQRGQLIISTPERW 1426
Query: 609 LHIC--IEMCLKLDNIKIVVFDEADRLFELGFGEQLQEICAR 728
+I + + N+K+ + D+ + G + +C+R
Sbjct: 1427 DNISRRWKQRKSVQNVKLFIADDL-HMIGASNGAVFEVVCSR 1467
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 34.7 bits (76), Expect = 0.079
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 273 PIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 377
P+QR I ++ +D V + TG GK+ C+ LP L
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 123
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 34.7 bits (76), Expect = 0.079
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 273 PIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 377
P+QR I ++ +D V + TG GK+ C+ LP L
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 146
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 33.1 bits (72), Expect = 0.24
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Frame = +3
Query: 279 QRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTREL 458
Q + + AL GK+ V +A TGSGKT + L+ + + + GK R ++L P L
Sbjct: 375 QEELVQPALEGKNCVIVAPTGSGKTEVAIYAALKHI---EERTSQGKPSRVVLLVPKIPL 431
Query: 459 -ALQTLRFVR------ELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVV 590
Q RF++ E+ F G S+ G E +S +P I++
Sbjct: 432 VGQQKDRFLKYCNGMYEVNGFHGSESSVSGTGRRDEVIATHVSVMTPQILI 482
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 32.3 bits (70), Expect = 0.42
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +3
Query: 246 TKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNL 425
+K G+ Q Q++ I L G D + TG+GK+ C+ LP + +L PG
Sbjct: 241 SKFGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAV--IL-------PGV-- 289
Query: 426 RALILSPTRELALQTLRFVRELGKFTGLTS-AAILGGESIEQQFNVMSGSSPDI 584
+++SP R L ++ELG G + A LG + E+ + + +P I
Sbjct: 290 -TVVVSPLRSLIEDQKMKMKELG--IGCEALTADLGAPAQEKIYAELGSGNPSI 340
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 32.3 bits (70), Expect = 0.42
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +3
Query: 246 TKRGYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNL 425
+K G+ Q Q++ I L G D + TG+GK+ C+ LP + +L PG
Sbjct: 241 SKFGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAV--IL-------PGV-- 289
Query: 426 RALILSPTRELALQTLRFVRELGKFTGLTS-AAILGGESIEQQFNVMSGSSPDI 584
+++SP R L ++ELG G + A LG + E+ + + +P I
Sbjct: 290 -TVVVSPLRSLIEDQKMKMKELG--IGCEALTADLGAPAQEKIYAELGSGNPSI 340
>U40417-6|AAA81415.2| 90|Caenorhabditis elegans Saposin-like
protein family protein6 protein.
Length = 90
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 605 APRCCNNYVWRRARHHIKLLLNGLSTKNSCTR 510
APR C +YV ++ IK L +G S K+ CT+
Sbjct: 54 APRECEHYVDKKLDPIIKELESGTSPKDVCTK 85
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 255 GYKQPTPIQRKTIPIALTGKDVVAMARTGSGKTACFVLPIL 377
G+K Q + L GKD + TG GK+ C+ LP L
Sbjct: 224 GHKGFREKQWDVVRNVLGGKDQFVLMSTGYGKSVCYQLPSL 264
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 28.7 bits (61), Expect = 5.2
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Frame = +3
Query: 306 TGKDVVAMARTGSGKTACFVLPILEKLLVPNNKPTPGKNLRALILSPTRELALQTLRFVR 485
T K+ + TGSGKT VL +L++ V P RA + L Q +
Sbjct: 25 TKKNTIVQLGTGSGKTFIAVL-LLKEYGVQLFAPLDQGGKRAFFVVEKVNLVEQQAIHIE 83
Query: 486 -----ELGKFTGLTSAAILGGESIEQQFNVMSGSSPDIVVATPGRFLHICIEMCLKLDNI 650
++G+ G TS+ + + QF +VV T L + LK++++
Sbjct: 84 VHTSFKVGQVHGQTSSGLWDSKEQCDQFM----KRHHVVVITAQCLLDLIRHAYLKIEDM 139
Query: 651 KIVVFDE 671
+++FDE
Sbjct: 140 CVLIFDE 146
>Z72502-1|CAA96585.2| 430|Caenorhabditis elegans Hypothetical
protein C08B6.2 protein.
Length = 430
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -1
Query: 335 SGHCNNIFPGQCYWYG-LTLYRCW 267
S N IFP + YWYG L Y+CW
Sbjct: 109 SSEWNKIFPIK-YWYGGLKNYKCW 131
>U39472-8|AAP86618.1| 338|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 32 protein.
Length = 338
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 601 PGVATTMSGEEPDITLNCCS 542
PG+ TT E DIT+N CS
Sbjct: 177 PGIVTTSCFRETDITINLCS 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,845,550
Number of Sequences: 27780
Number of extensions: 310783
Number of successful extensions: 900
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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