Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_O10
         (817 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    25   2.1  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   6.4  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   8.5  

>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 422 AIHFKKLKSVKLGIDDYQKFLDDLAKNKKVE 514
           A HF+  KS K+ ++ Y K      K  K+E
Sbjct: 101 ATHFEANKSFKITVETYNKHFSQREKVAKIE 131


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 661 FIEALPVRASIFARVCQSIYGRCGCR 584
           F+  +P   +  A +C S  GRC C+
Sbjct: 721 FMPCVPCDCNKHAEICDSETGRCICQ 746


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
 Frame = +1

Query: 319 RSQVRWKSHHALAKRQMDEASQSH-*WKENNNNGHGHSLQKTQIGKTRH 462
           R  +  K HH  +KR  D   Q+H  + E   NG         I +  H
Sbjct: 839 RRMISEKKHHKRSKRVKDGKQQNHVSFPEFVQNGSAKQFANDYINEVLH 887


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 803,715
Number of Sequences: 2352
Number of extensions: 16085
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)