Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_O06
(572 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0310 - 16669565-16669822,16670558-16670794 166 1e-41
03_01_0290 + 2246791-2247027,2248089-2248346 166 1e-41
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 31 0.49
04_01_0589 + 7704262-7704429,7704718-7705540,7705844-7706484 30 1.1
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 30 1.5
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 30 1.5
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 30 1.5
01_06_1794 - 39919363-39920025 29 2.0
09_01_0142 - 2103224-2103864,2104264-2104399 29 2.6
08_01_0041 - 290333-290698,290854-291861 29 3.5
03_01_0032 + 300759-301988 29 3.5
01_06_0304 + 28340976-28342512,28342774-28342799,28343268-28343999 29 3.5
01_01_0981 + 7766025-7766753 29 3.5
01_01_0167 + 1422344-1424260,1424338-1424472,1424568-1424990,142... 29 3.5
09_02_0307 + 7131031-7131326,7131414-7131560,7132579-7132711,713... 28 4.6
02_01_0391 + 2838471-2838794,2838892-2839028,2841155-2841631,284... 28 4.6
01_01_0990 + 7847066-7847478,7847713-7848679 28 4.6
03_06_0467 + 34145126-34145187,34145403-34145759,34146161-341462... 28 6.1
03_02_0263 - 6948618-6948818,6948909-6948971,6949078-6949146,694... 28 6.1
02_05_0026 + 25168944-25168991,25169114-25169179,25169414-25169599 28 6.1
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 28 6.1
08_01_0283 - 2304024-2304111,2304224-2304343,2304594-2304715,230... 27 8.0
07_01_0174 - 1227871-1228043,1228303-1228423,1228519-1228588,122... 27 8.0
03_06_0140 + 31951569-31951710,31951943-31952037,31952141-319539... 27 8.0
>10_08_0310 - 16669565-16669822,16670558-16670794
Length = 164
Score = 166 bits (403), Expect = 1e-41
Identities = 77/145 (53%), Positives = 105/145 (72%)
Frame = +1
Query: 94 LFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALG 273
LFAR FR G IPL+TY++ YK+G+ VD++ NGAV KGMPHK YHG+TGRV+NVT A+G
Sbjct: 14 LFARPFRKKGYIPLTTYLRTYKIGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIG 73
Query: 274 VIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPA 453
V +NK+V RII KRI++RVEHV+ S+C ++F R +N++L +AKA G+ ++ KRQP
Sbjct: 74 VEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKIKNDQLKADAKARGEVISTKRQPQ 133
Query: 454 PPKAAHIVSGTEKPVLLAPIPYEFV 528
PK +V G + PIPY+ V
Sbjct: 134 GPKPGFMVEGATLET-VTPIPYDVV 157
>03_01_0290 + 2246791-2247027,2248089-2248346
Length = 164
Score = 166 bits (403), Expect = 1e-41
Identities = 77/145 (53%), Positives = 104/145 (71%)
Frame = +1
Query: 94 LFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALG 273
LFAR FR G IPL+TY++ YK+GD VD++ NGAV KGMPHK YHG+TGRV+NVT A+G
Sbjct: 14 LFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIG 73
Query: 274 VIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPA 453
V +NK+V RII KRI++RVEHV+ S+C ++ R +N++L +AKA G+ ++ KRQP
Sbjct: 74 VEINKQVGNRIIRKRIHVRVEHVQPSRCTEELRLRKIKNDQLKADAKARGEVISTKRQPE 133
Query: 454 PPKAAHIVSGTEKPVLLAPIPYEFV 528
PK +V G + PIPY+ V
Sbjct: 134 GPKPGFMVEGATLET-VTPIPYDVV 157
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 31.5 bits (68), Expect = 0.49
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +3
Query: 180 QRQW-CS--SKGYATQSIPWKDRSRVQRYCSCS--RCDCQQACSRKDYTEAHQYPC*ACQ 344
+++W C SK YA QS WK S++ C RCDC SR+D H+ C A
Sbjct: 117 EKKWKCDKCSKRYAVQS-DWKAHSKI---CGTREYRCDCGTLFSRRDSFITHRAFCDA-- 170
Query: 345 ALQVQTRLP 371
Q +RLP
Sbjct: 171 LAQESSRLP 179
>04_01_0589 + 7704262-7704429,7704718-7705540,7705844-7706484
Length = 543
Score = 30.3 bits (65), Expect = 1.1
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +1
Query: 235 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 414
T R NV +IV VRGRI+P I ++H + K+ +EN L+ +
Sbjct: 409 TNRHLNVQPPPQRIIVKGTVRGRIVPPAIVSSLQHQRQQG------KQCQENNSSLQLQR 462
Query: 415 AAGKTVNLKRQPAP-PKAAHIVSGTEKPVLLAPI 513
+Q +P P + IVS + P +API
Sbjct: 463 GGTLLRQHPQQVSPAPGRSTIVSSSNAP-RIAPI 495
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 29.9 bits (64), Expect = 1.5
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Frame = +3
Query: 168 HCRH--QRQW-CS--SKGYATQSIPWKDRSRVQRYCSCS--RCDCQQACSRKDYTEAHQY 326
+CR +++W C SK YA QS WK S+ C RCDC SR+D H+
Sbjct: 115 YCRKHGEKKWRCDKCSKRYAVQS-DWKAHSKT---CGTREYRCDCGTLFSRRDSFITHRA 170
Query: 327 PC*ACQALQVQTRLP 371
C A Q R+P
Sbjct: 171 FCDA--LAQENARMP 183
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 29.9 bits (64), Expect = 1.5
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Frame = +3
Query: 180 QRQW-CS--SKGYATQSIPWKDRSRVQRYCSCS--RCDCQQACSRKDYTEAHQYPC*ACQ 344
+++W C SK YA QS WK ++ C RCDC SR+D H+ C A
Sbjct: 121 EKKWKCDKCSKKYAVQS-DWKAHTKT---CGSREYRCDCGTLFSRRDSFITHRAFCDALA 176
Query: 345 ALQVQTRLP*ESQRE*EATEGSQGCRQDRQP 437
+ R + + T S G + P
Sbjct: 177 EESAKARAAPPPPADEDGTSASAGAPPPQAP 207
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +3
Query: 180 QRQW-CS--SKGYATQSIPWKDRSRVQRYCSCS--RCDCQQACSRKDYTEAHQYPC 332
+++W C SK YA QS WK +++ C RCDC SRKD H+ C
Sbjct: 139 EKKWKCDRCSKKYAVQS-DWKAHTKI---CGTKEYRCDCGTIFSRKDSFITHRAFC 190
>01_06_1794 - 39919363-39920025
Length = 220
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 376 RVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPI 513
R ++ ++ EA AAG + KRQP PP SG A +
Sbjct: 27 RQQQQQQQQYEAAAAGDKTSAKRQPPPPSRLKKTSGRNDDAATAAV 72
>09_01_0142 - 2103224-2103864,2104264-2104399
Length = 258
Score = 29.1 bits (62), Expect = 2.6
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +1
Query: 235 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 414
T R NV +IV VRGRI+P I ++H + K+ +EN L+ +
Sbjct: 124 TNRHLNVQPPPQRIIVKGTVRGRIVPPAIVSSLQHQRQQG------KQCQENNSSLQLQR 177
Query: 415 AAGKTVNLKRQPAP-PKAAHIVSGTEKPVLLAPI 513
+ +Q +P P +VS + P +API
Sbjct: 178 GSMLLRQHPQQVSPAPGRPTVVSSSNAP-RIAPI 210
>08_01_0041 - 290333-290698,290854-291861
Length = 457
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +2
Query: 8 PMLSRSVKLCNTRLEDDELQGLPPRHQGTCSLAGSAHM 121
P+L +KLC + DDEL P G + G H+
Sbjct: 14 PLLLLLIKLCRAKTRDDELFDKLPSPPGRLPVIGHLHL 51
>03_01_0032 + 300759-301988
Length = 409
Score = 28.7 bits (61), Expect = 3.5
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +3
Query: 27 SSFVTQGSKMTNSKGYRRGTRXLVRSQVPHTWNYSALHVHESVQSWRHCRHQRQWCS-SK 203
S FV + + +R G+ V ++P S+ + +++ +C+H+R + SK
Sbjct: 144 SVFVPNADADNDYEHHRPGSSLFVMERIPKPEVNSSTQWSDQFEAFVYCKHKRTSTNFSK 203
Query: 204 GYATQSIPWKDRSRVQRYC-SCSR 272
+ Q +P R +Y SCSR
Sbjct: 204 TWQWQLLPPPPYVREPKYWHSCSR 227
>01_06_0304 + 28340976-28342512,28342774-28342799,28343268-28343999
Length = 764
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 6/70 (8%)
Frame = +3
Query: 135 LHVHESVQSWRHCRHQRQWCSSKGYAT------QSIPWKDRSRVQRYCSCSRCDCQQACS 296
LH H+ R C+ R S T K ++ CSCS+ D +CS
Sbjct: 232 LHTHQVTDENRQCKSARGMLSHLDNYTGLNSDHAGKKLKGHLSIEEPCSCSKDDTDSSCS 291
Query: 297 RKDYTEAHQY 326
D A Y
Sbjct: 292 LADEHHARHY 301
>01_01_0981 + 7766025-7766753
Length = 242
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = +3
Query: 207 YATQSIPWKDRS---RVQRYC-SCSRCDCQQACSRKDYTEAHQY 326
+A Q +P +D + R RYC SC+R C CS H +
Sbjct: 13 FAKQRLPLEDLTQTCRRDRYCVSCARAFCSHCCSSHHLWPGHHH 56
>01_01_0167 +
1422344-1424260,1424338-1424472,1424568-1424990,
1425183-1425252,1425356-1425495,1425620-1425679,
1425776-1425931,1426272-1426541
Length = 1056
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 154 YKVGDIVDIRGNGAVQKGMPHKVY 225
++ GDI+ I G+G+V K PH++Y
Sbjct: 623 FEDGDIIVIWGDGSVSKVGPHEIY 646
>09_02_0307 +
7131031-7131326,7131414-7131560,7132579-7132711,
7133115-7133207,7133421-7133717
Length = 321
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 403 KEAKAAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFVA 531
++A AA + L+ + A G E+P L P+PYE+ A
Sbjct: 77 RKAAAAAEADALRSAARQARTASSWYGDERPRWLGPVPYEYPA 119
>02_01_0391 +
2838471-2838794,2838892-2839028,2841155-2841631,
2841719-2841999,2843009-2843051,2844094-2844148,
2845771-2845824,2846282-2846314,2846574-2846621,
2846885-2846950,2847286-2847426
Length = 552
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -3
Query: 351 GVLDMLNTDIDAL-RYNPSANTLVDNHTESMSSNVVHATCLSMVYFVWHTLLNCTIASDV 175
GV+++ ++ +A RYN +A+ L + TES+ S + C++ + + + T
Sbjct: 239 GVIEIPYSEEEACCRYNETASILKELITESVGSEAIGVDCIADFRRLLRQMESMTSVCQE 298
Query: 174 YNVSN 160
Y +SN
Sbjct: 299 YIISN 303
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 28.3 bits (60), Expect = 4.6
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +3
Query: 180 QRQW-CS--SKGYATQSIPWKDRSRVQRYCSCS--RCDCQQACSRKDYTEAHQYPC 332
+++W C SK YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 98 EKKWKCDKCSKRYAVQS-DWKAHSKT---CGTREYRCDCGTLFSRRDSFITHRAFC 149
>03_06_0467 +
34145126-34145187,34145403-34145759,34146161-34146248,
34146361-34146506,34146892-34146936,34147030-34147133,
34147225-34147361,34147651-34147761,34148455-34148664
Length = 419
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 410 PRLPARPST*RDSQLPLKLPTSSVELRNPSYLRLSH 517
P L RP R P+ PT + +++ PS+L L H
Sbjct: 347 PNLQERPMDRRPELGPMPFPTQAWQMQAPSHLPLLH 382
>03_02_0263 -
6948618-6948818,6948909-6948971,6949078-6949146,
6949232-6949297,6949380-6949526,6949608-6949702,
6949845-6950016,6952187-6952318,6953581-6953674,
6954067-6954184,6955884-6957057
Length = 776
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 249 QRYCSCSRCDCQQACSRKDYTEAHQYPC 332
Q C C C C + RKD A +Y C
Sbjct: 391 QDTCGCMMCKCIYSDQRKDIVLADKYTC 418
>02_05_0026 + 25168944-25168991,25169114-25169179,25169414-25169599
Length = 99
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 340 VKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQ 447
++ +KCRQD++ VK++ +L+++ A K KRQ
Sbjct: 1 MRQAKCRQDYMAIVKQSRQLIEKLDA--KNEPKKRQ 34
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 27.9 bits (59), Expect = 6.1
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +3
Query: 180 QRQW-CS--SKGYATQSIPWKDRSRVQRYCSCS--RCDCQQACSRKDYTEAHQYPC 332
+++W C SK YA S WK S+V C RCDC SR+D H+ C
Sbjct: 148 EKKWKCDKCSKRYAVHS-DWKAHSKV---CGTREYRCDCGTLFSRRDSFITHRAFC 199
>08_01_0283 -
2304024-2304111,2304224-2304343,2304594-2304715,
2304824-2305096,2305454-2305558,2305635-2305851,
2306012-2306262,2306518-2306724,2307087-2307351,
2308655-2308749
Length = 580
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 162 WRHCRHQRQWCSSKGYATQSIPWKDRSRV 248
W H QW YAT+ I W+ R+ V
Sbjct: 535 WISIGHSTQWLWYSVYATKQISWRTRALV 563
>07_01_0174 -
1227871-1228043,1228303-1228423,1228519-1228588,
1228877-1228953,1229215-1229393,1229558-1229684,
1229849-1229861,1230351-1230378,1230426-1230516,
1230870-1230956,1231239-1231276,1231426-1231464,
1231553-1231699,1231899-1231958,1232033-1232111,
1232429-1232517,1232906-1232967,1233238-1233427,
1233929-1234068,1235813-1236147,1237086-1237133
Length = 730
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 205 GMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKC 357
G P G T VY+V AH+ GVIV+ + I V+ ++H C
Sbjct: 137 GQPLLEMIGHTSLVYSVDAHSSGVIVSGSEDRSAKIWKDGICVQSIEHPGC 187
>03_06_0140 +
31951569-31951710,31951943-31952037,31952141-31953982,
31954065-31954179,31954260-31954897
Length = 943
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +2
Query: 305 LYRSASISVLSMSSTPSADKTSLRESKRM 391
+Y+SA++ V + SS P+ADK + + ++M
Sbjct: 410 VYKSANLQVSNSSSIPAADKQTRQTMRQM 438
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,745,271
Number of Sequences: 37544
Number of extensions: 327371
Number of successful extensions: 1172
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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