Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_O06
(572 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40720| Best HMM Match : 7tm_3 (HMM E-Value=0) 126 1e-29
SB_49776| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23) 31 0.88
SB_1824| Best HMM Match : Cupin_3 (HMM E-Value=1.6) 29 2.0
SB_55854| Best HMM Match : NinE (HMM E-Value=2.1) 29 2.0
SB_52319| Best HMM Match : Rho_N (HMM E-Value=1.8e-07) 28 4.7
SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13) 28 4.7
SB_36211| Best HMM Match : RVT_1 (HMM E-Value=0) 28 4.7
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_24771| Best HMM Match : RVT_1 (HMM E-Value=0) 28 4.7
SB_8127| Best HMM Match : RVT_1 (HMM E-Value=0) 28 4.7
SB_57310| Best HMM Match : rve (HMM E-Value=2.5e-25) 28 4.7
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_25040| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_13410| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11) 28 6.2
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 28 6.2
SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
>SB_40720| Best HMM Match : 7tm_3 (HMM E-Value=0)
Length = 768
Score = 126 bits (304), Expect = 1e-29
Identities = 55/77 (71%), Positives = 67/77 (87%)
Frame = +1
Query: 94 LFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALG 273
+F+++FR G LSTY+K YKVGDIVD++ NGAVQKGMPHKVYHGKTGRVYNVT ALG
Sbjct: 436 MFSKKFRHRGVEHLSTYLKCYKVGDIVDVKANGAVQKGMPHKVYHGKTGRVYNVTKRALG 495
Query: 274 VIVNKRVRGRIIPKRIN 324
V+VNK+V+G+I+ KRIN
Sbjct: 496 VVVNKQVKGKILAKRIN 512
Score = 30.7 bits (66), Expect = 0.88
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 54 MTNSKGYRRGTRXLVRSQVPH 116
MTN+KGYRRGTR + + H
Sbjct: 423 MTNTKGYRRGTRYMFSKKFRH 443
>SB_49776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 31.9 bits (69), Expect = 0.38
Identities = 23/83 (27%), Positives = 35/83 (42%)
Frame = +1
Query: 175 DIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSK 354
DI G G+ GMP + G+V ++ A GV++ R ++ + H HSK
Sbjct: 102 DIEGTGSYNGGMPQEDLRNTIGQVADL--GAAGVVMWGNRRDENTSPQVCKHINHYIHSK 159
Query: 355 CRQDFLKRVKENERLLKEAKAAG 423
F+ R+K E K G
Sbjct: 160 L-GPFIHRMKTTAEKCSELKCRG 181
>SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23)
Length = 565
Score = 30.7 bits (66), Expect = 0.88
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 367 FLKRVKENERLLKEAKAAGKTVNLKRQPA-PPKAAHIVSGTEKPVLLAPIP 516
F+KR + +R L+E A +NL ++PA P K + EKPV P P
Sbjct: 272 FVKRTQRRQRELEEVADA---INLAKRPAQPEKPLKFLVKVEKPVPRPPTP 319
>SB_1824| Best HMM Match : Cupin_3 (HMM E-Value=1.6)
Length = 305
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 430 VNLKRQPAPPKAAHIVSGTEKPVLLAPIPYE 522
VN + PP A + ++ ++PVL P+P++
Sbjct: 130 VNKSKAETPPPAYYTITSNQEPVLNMPVPWQ 160
>SB_55854| Best HMM Match : NinE (HMM E-Value=2.1)
Length = 271
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 313 KRINIRVEH-VKHSKCRQDFLKRVKENERLLKEAKAAGKT 429
+RI ++H ++ K +QDF+ +KE RL +E+++ T
Sbjct: 39 ERIQSCIDHKLEERKIKQDFVTLIKERNRLGRESRSGAST 78
>SB_52319| Best HMM Match : Rho_N (HMM E-Value=1.8e-07)
Length = 1458
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 313 KRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGTEK 492
K I + EH + S C Q F + N + ++ + GKT + + K HI+S +EK
Sbjct: 413 KNIELLTEHWECSGCEQRFNRHDNYNRHVTEKRCSGGKTQLICK---GEKFKHIMSSSEK 469
>SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13)
Length = 3035
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 156 QSWRHCRHQRQWCSSKGYATQSIPWKDRSRVQRYCSCSR 272
++W CR + C S G + +KD S+ Y SC +
Sbjct: 946 ENW--CRDYQMLCRSYGKFPMGVNYKDTSKYYEYSSCRK 982
>SB_36211| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1020
Score = 28.3 bits (60), Expect = 4.7
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +1
Query: 103 RRFRTHGTIPLSTYMKVYKVG--DIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGV 276
R+ T T + + K ++G DI+ R +Q +P K++H ++ H
Sbjct: 482 RKKETPETKAMLRHWKKLELGKDDILRRRIGPRLQLVLPRKLHHLVYKELHEEMGHLGAE 541
Query: 277 IVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENER 396
V + R R R+ +EH S CR KR K +R
Sbjct: 542 RVLQLARDRFFWPRMQQDIEHYVTSVCRCIKQKRPKHAQR 581
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Frame = -3
Query: 330 TDIDALR--YNPSANTLVDNHT-----ESMSSNVVHATCLSMVYFVWHTLLNCTI 187
+D D LR Y +A L H M++N TCL M W TLL TI
Sbjct: 52 SDCDNLRPKYEKAARDLAKEHKFVMAKALMNTNSTQTTCLPMGVHYWRTLLAYTI 106
>SB_24771| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1387
Score = 28.3 bits (60), Expect = 4.7
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +1
Query: 103 RRFRTHGTIPLSTYMKVYKVG--DIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGV 276
R+ T T + + K ++G DI+ R +Q +P K++H ++ H
Sbjct: 719 RKKETPETKAMLRHWKKLELGKDDILRRRIGPRLQLVLPRKLHHLVYKELHEEMGHLGAE 778
Query: 277 IVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENER 396
V + R R R+ +EH S CR KR K +R
Sbjct: 779 RVLQLARDRFFWPRMQQDIEHYVTSVCRCIKQKRPKHAQR 818
>SB_8127| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1623
Score = 28.3 bits (60), Expect = 4.7
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +1
Query: 103 RRFRTHGTIPLSTYMKVYKVG--DIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGV 276
R+ T T + + K ++G DI+ R +Q +P K++H ++ H
Sbjct: 1270 RKKETPETKAMLRHWKKLELGKDDILRRRIGPRLQLVLPRKLHHLGYKELHEEMGHLGAE 1329
Query: 277 IVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENER 396
V + R R R+ +EH S CR KR K +R
Sbjct: 1330 RVLQLARDRFFWPRMQQDIEHYVTSVCRCIKQKRPKHAQR 1369
>SB_57310| Best HMM Match : rve (HMM E-Value=2.5e-25)
Length = 440
Score = 28.3 bits (60), Expect = 4.7
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +1
Query: 103 RRFRTHGTIPLSTYMKVYKVG--DIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGV 276
R+ T T + + K ++G DI+ R +Q +P K++H ++ H
Sbjct: 166 RKKETPETKAMLRHWKKLELGKDDILRRRIGPRLQLVLPRKLHHLGYKELHEEMGHLGAE 225
Query: 277 IVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENER 396
V + R R R+ +EH S CR KR K +R
Sbjct: 226 RVLQLARDRFFWPRMQQDIEHYVTSVCRCIKQKRPKHAQR 265
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/71 (21%), Positives = 35/71 (49%)
Frame = +1
Query: 313 KRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGTEK 492
+++ + K R + ++ + +RLL+++++ K L++ P P A + + E
Sbjct: 1536 RKLTVEQREPYRLKARDNRVRLKDQEKRLLRQSESEKKHAALEQPPTP--APQVETQPET 1593
Query: 493 PVLLAPIPYEF 525
P+ A P+ F
Sbjct: 1594 PIHQAASPFVF 1604
>SB_25040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 456
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 199 QKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEH 339
++G PH+ + G TGR A+ + +K + +++ +R NI + H
Sbjct: 108 KEGKPHENHSGLTGR-----RGAMRALASKDINAQLLKERFNINMPH 149
>SB_13410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1984
Score = 28.3 bits (60), Expect = 4.7
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +1
Query: 103 RRFRTHGTIPLSTYMKVYKVG--DIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGV 276
R+ T T + + K ++G DI+ R +Q +P K++H ++ H
Sbjct: 1054 RKKETPETKAMLRHWKKLELGKDDILRRRIGPRLQLVLPRKLHHLVYKELHEEMGHLGAE 1113
Query: 277 IVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENER 396
V + R R R+ +EH S CR KR K +R
Sbjct: 1114 RVLQLARDRFFWPRMQQDIEHYVTSVCRCIKQKRPKHAQR 1153
>SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11)
Length = 3369
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 261 SCSRCDCQQACSRKDYTEAHQYPC 332
+C CD Q C + T HQ PC
Sbjct: 2333 NCGWCDSAQQCMPGNQTRPHQEPC 2356
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 35 CNTRLEDDELQGLPPRHQGTC 97
CNT + DE Q P +HQGTC
Sbjct: 174 CNTDI--DECQSSPCKHQGTC 192
>SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 335 SMSSTPSADKTSLRESKRMRGY*RKPRLPARPST*RDSQLPLKLP 469
++S+ PS KT+ ++R RKP +PAR ST ++ P
Sbjct: 633 TLSAPPSRPKTAPTSAQRTPEPIRKPLVPARMSTDSTDAFKIQAP 677
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,045,574
Number of Sequences: 59808
Number of extensions: 380181
Number of successful extensions: 1208
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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