Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_O06
         (572 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           27   0.57 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   2.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   4.0  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    23   5.3  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   5.3  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   5.3  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   5.3  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   5.3  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    23   7.1  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   7.1  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     23   7.1  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   9.3  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    23   9.3  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 26.6 bits (56), Expect = 0.57
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 358  RQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPP 459
            R++  +R +E  +L  EA  A +  N + QP PP
Sbjct: 1101 REEDERRTEERRQLHNEANRAYRQRNRRSQPTPP 1134


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +1

Query: 343 KHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGT 486
           KH  C  +     +E +++ KEA    +T+NL +     +A  +  GT
Sbjct: 323 KHRLCELNREPTEREEQQMQKEAAVMARTMNLNQVCLCFRAYRVEPGT 370


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 207 YATQSIPWKDRSRVQRYCSCSR 272
           YA + +PW+DR+ +  Y +  R
Sbjct: 928 YALRLLPWQDRNNLPPYAARCR 949


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 249 QRYCSCSRCDCQQAC 293
           +RYC    C C++ C
Sbjct: 57  KRYCKYRACQCEKCC 71


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 249 QRYCSCSRCDCQQAC 293
           +RYC    C C++ C
Sbjct: 57  KRYCKYRACQCEKCC 71


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 321  DALRYNPSANTLVDNHTESMSSNVVH 244
            DA+R   + + +V NH E  S++ +H
Sbjct: 3072 DAIRIGSNESIVVPNHMERSSASSLH 3097


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 45  GSKMTNSKGYRRGTRXLVRSQVPHTWNYSALHVHESVQSWRHCRHQRQ 188
           G  M N  G +   R L+ S V     Y+A   HE+ ++ + CR   Q
Sbjct: 783 GCLMRNHSGPKCAKRRLLASVVDSILRYAAPVWHEATKN-QECRRMLQ 829


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 197 TAPLPLMSTMSPTLYTFMYVE 135
           TA +P  S + PTL+  MY E
Sbjct: 607 TAGVPQGSVLGPTLWNLMYNE 627


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 249 QRYCSCSRCDCQQAC 293
           +RYC    C C++ C
Sbjct: 57  KRYCKYRTCHCEKCC 71


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +3

Query: 249 QRYCSCSRCDCQQAC 293
           +RYC    C C++ C
Sbjct: 57  KRYCKYRTCHCEKCC 71


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 257 VTLYTRPVFPWYTLCGIP 204
           V ++ RP  PW+++ GIP
Sbjct: 73  VGIFGRPGRPWWSVPGIP 90


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 108 VPHTWNYSALHVHESVQS 161
           V +TWNY+A  V + V S
Sbjct: 282 VENTWNYTAADVADLVDS 299


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 12/52 (23%), Positives = 24/52 (46%)
 Frame = +1

Query: 244 VYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERL 399
           ++ +  H  GV+V+ + R          + EH++H   R    K  + NE++
Sbjct: 117 LFQIGQHVRGVLVSIKSRMMAYTNDAVAKFEHLRHRTMRAVKRKMDELNEQI 168


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,490
Number of Sequences: 2352
Number of extensions: 11762
Number of successful extensions: 71
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)