Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_O03
(688 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48635| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 2e-46
SB_366| Best HMM Match : ResIII (HMM E-Value=0.28) 33 0.16
SB_13172| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_52975| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_17392| Best HMM Match : DUF385 (HMM E-Value=1.1) 33 0.22
SB_43900| Best HMM Match : ResIII (HMM E-Value=0.53) 32 0.38
SB_48331| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_38850| Best HMM Match : ResIII (HMM E-Value=0.045) 31 0.66
SB_23107| Best HMM Match : ResIII (HMM E-Value=0.045) 31 0.66
SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_46952| Best HMM Match : Gemini_AL2 (HMM E-Value=1.3) 30 2.0
SB_43870| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 30 2.0
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05) 30 2.0
SB_46824| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16) 29 2.7
SB_57367| Best HMM Match : DUF1660 (HMM E-Value=1.5) 29 3.5
SB_37609| Best HMM Match : Extensin_2 (HMM E-Value=0.081) 29 3.5
SB_3900| Best HMM Match : DUF1070 (HMM E-Value=1) 29 4.7
SB_37320| Best HMM Match : GP46 (HMM E-Value=5) 28 6.2
SB_52346| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.3) 28 8.1
SB_15397| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_9386| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_36161| Best HMM Match : SecIII_SopE_N (HMM E-Value=4.1) 28 8.1
SB_7361| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_48635| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 182 bits (443), Expect = 2e-46
Identities = 93/208 (44%), Positives = 123/208 (59%), Gaps = 7/208 (3%)
Frame = +2
Query: 83 LQKQTENVDENKTNANNSNHEPPPKKH-SSVVAAHYNHLEEKGLKERYNSPIFHLRNFNN 259
L + + ++ + T+ S E K + VA HYN E + R +S IFH+RNFNN
Sbjct: 38 LDEAPKALNGSSTDDKKSEDEQKEKGALGATVAKHYNEHPEGSKESRKDSRIFHMRNFNN 97
Query: 260 WVKSVLIQEFTDKIREKDYGRPLRILDICCGKGGDLSKWQKVRPEHAIFADIAEVSVQQC 439
WVKSVLI +F +KI+ +Y R + +LD+CCGKGGDL KWQ+ R + ADIAEVSV QC
Sbjct: 98 WVKSVLIGDFLNKIKRYNY-RDISVLDLCCGKGGDLLKWQRGRIRQLVCADIAEVSVNQC 156
Query: 440 ETRYEEL------RRRCGRLFSAEFIATDCTKDXLRDKYKDPSXSFDIVSCQFGLXXSFE 601
+ RY E+ RR +F +FI DC+K+ + D++ DP FD+ SCQF SFE
Sbjct: 157 KERYNEMKQTAEERRYRDGIFYTQFITADCSKERIADQFTDPELQFDLTSCQFSYHYSFE 216
Query: 602 XLLXXRXMLTNISECLKPGGYXFGTIPN 685
ML N E LKPGG+ GT PN
Sbjct: 217 SYEQADMMLKNACEKLKPGGFFIGTTPN 244
>SB_366| Best HMM Match : ResIII (HMM E-Value=0.28)
Length = 1104
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +2
Query: 320 RPLRILDICCGKGGDLSKWQKVRPEHAIFADIAEVSVQQCETRYEELRRRCGRLFS 487
RP ++ +CCG G + W+ H + + A+ +++ E+ Y L CG+ +S
Sbjct: 888 RPCQV--VCCGDYGQVPPWEDKEGPHDMLKEWAQGNIRWFESDYRCLCEDCGKPYS 941
>SB_13172| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 599
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +2
Query: 320 RPLRILDICCGKGGDLSKWQKVRPEHAIFADIAEVSVQQCETRYEELRRRCGRLFS 487
RP ++ +CCG G + W+ H + + A+ +++ E+ Y L CG+ +S
Sbjct: 383 RPCQV--VCCGDYGQVPPWEDKEGPHDMLKEWAQGNIRWFESDYRCLCEDCGKPYS 436
>SB_52975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +2
Query: 320 RPLRILDICCGKGGDLSKWQKVRPEHAIFADIAEVSVQQCETRYEELRRRCGRLFS 487
RP ++ +CCG G + W+ +F + A+ +++ E+ Y L CG+ +S
Sbjct: 611 RPCQV--VCCGDYGQVPPWEDKEGPQDMFKEWAQENIRWFESDYRCLCEDCGKPYS 664
>SB_17392| Best HMM Match : DUF385 (HMM E-Value=1.1)
Length = 942
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +2
Query: 320 RPLRILDICCGKGGDLSKWQKVRPEHAIFADIAEVSVQQCETRYEELRRRCGRLFS 487
RP ++ +CCG G + W+ +F + A+ +++ E+ Y L CG+ +S
Sbjct: 770 RPCQV--VCCGDYGQVPPWEDKEGPQDMFKEWAQENIRWFESDYRCLCEDCGKPYS 823
>SB_43900| Best HMM Match : ResIII (HMM E-Value=0.53)
Length = 540
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +2
Query: 320 RPLRILDICCGKGGDLSKWQKVRPEHAIFADIAEVSVQQCETRYEELRRRCGRLF 484
RP ++ +CCG G + W+ H + + A+ +++ E+ Y L CG+ +
Sbjct: 332 RPCQV--VCCGDYGQVPPWEDKEGPHDMLKEWAQGNIRWFESDYRCLCEGCGKQY 384
>SB_48331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 31.5 bits (68), Expect = 0.66
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 338 DICCGKGGDLSKWQKVRPEHAIFADIAEVSVQQCETRYEELRRRCGRLFS 487
++CCG G + W H + + A+ ++ E+ Y L CG+ +S
Sbjct: 264 EVCCGDYGQVPPWGDKEGPHDMLEEWAQGNIHWFESDYRCLCEGCGKPYS 313
>SB_38850| Best HMM Match : ResIII (HMM E-Value=0.045)
Length = 382
Score = 31.5 bits (68), Expect = 0.66
Identities = 36/165 (21%), Positives = 64/165 (38%), Gaps = 10/165 (6%)
Frame = +2
Query: 8 CDVYQAXVSRQEFEEMSEFGDSELSLQKQTENVDENKTNANNSNHEPPPKKHSSVVAAHY 187
CD+ A ++ G +E ++ T N+ H+ +V A Y
Sbjct: 194 CDLVAATSAKMYLAGQGGSGKTEWAVSMFRGRNVVVLTPENDLAHDHRNNPRLAVKAQTY 253
Query: 188 NHL----EEKGLKERYNSPIFHLRNFNNWVKSVLIQEFTDKIREK------DYGRPLRIL 337
+H EK +KE S + H ++ + ++I E K++ K DY
Sbjct: 254 HHYLCIPAEKPIKEWRPSELGH--KLDHLAEVIIIDECC-KVQTKVLRAILDYVATWPCQ 310
Query: 338 DICCGKGGDLSKWQKVRPEHAIFADIAEVSVQQCETRYEELRRRC 472
+CCG G +S W H + + A+ +++ E+ Y L C
Sbjct: 311 VVCCGDYGQVSPWGNKEGPHDMLEEWAQGNIRWFESDYRCLCEDC 355
>SB_23107| Best HMM Match : ResIII (HMM E-Value=0.045)
Length = 418
Score = 31.5 bits (68), Expect = 0.66
Identities = 36/165 (21%), Positives = 64/165 (38%), Gaps = 10/165 (6%)
Frame = +2
Query: 8 CDVYQAXVSRQEFEEMSEFGDSELSLQKQTENVDENKTNANNSNHEPPPKKHSSVVAAHY 187
CD+ A ++ G +E ++ T N+ H+ +V A Y
Sbjct: 230 CDLVAATSAKMYLAGQGGSGKTEWAVSMFRGRNVVVLTPENDLAHDHRNNPRLAVKAQTY 289
Query: 188 NHL----EEKGLKERYNSPIFHLRNFNNWVKSVLIQEFTDKIREK------DYGRPLRIL 337
+H EK +KE S + H ++ + ++I E K++ K DY
Sbjct: 290 HHYLCIPAEKPIKEWRPSELGH--KLDHLAEVIIIDECC-KVQTKVLRAILDYVATWPCQ 346
Query: 338 DICCGKGGDLSKWQKVRPEHAIFADIAEVSVQQCETRYEELRRRC 472
+CCG G +S W H + + A+ +++ E+ Y L C
Sbjct: 347 VVCCGDYGQVSPWGNKEGPHDMLEEWAQGNIRWFESDYRCLCEDC 391
>SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +2
Query: 32 SRQEFEEMSEFGDSELSLQKQTENVDENKTNANNSNHEPPPKKHSSVVAAHYNHLEEKGL 211
S+++ EE E G+ E S ++ TE D+ + +S+ E + S+ + LEE+G
Sbjct: 647 SKRKEEERGEGGE-EFSPEEGTEGRDDGSPSHQDSDTEDNSQDIFSLTESERLELEEQGR 705
Query: 212 KER 220
+ER
Sbjct: 706 RER 708
>SB_46952| Best HMM Match : Gemini_AL2 (HMM E-Value=1.3)
Length = 258
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 134 SNHEPPPKKHSSVVAAHYNHLEEKGLKER 220
+ H P K+HS+ V A NH +++ LK R
Sbjct: 83 TGHNDPEKEHSNTVHAQKNHEQKQDLKTR 111
>SB_43870| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 869
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +2
Query: 74 ELSLQKQTENVDENKTNANNSNHEPPPKKHSSVVAAHYNHLEEKGLKERYNSPIFHL 244
E K+T N+ TNA+ P SS VA L ++ L+ R +S + HL
Sbjct: 290 EYHCDKETTNITMETTNAHAPRRTPSTSSTSSAVAL----LRQRSLRNRLDSRLTHL 342
>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
Length = 2293
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/46 (21%), Positives = 25/46 (54%)
Frame = +2
Query: 71 SELSLQKQTENVDENKTNANNSNHEPPPKKHSSVVAAHYNHLEEKG 208
S+++ +K T+ + ++ + + + +KH+ +A H NH +G
Sbjct: 211 SDITHEKHTDTIADHTNHKHREGSDITHEKHTDTIADHTNHKHREG 256
>SB_46824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 101 NVDENKTNANNSNHEPPPKKHSSVVAAHYNH 193
N++ N ++ NNSN+ K SS+ A YN+
Sbjct: 3 NINHNNSDKNNSNNNKRNSKDSSINKASYNN 33
>SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16)
Length = 678
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 56 SEFGDSELSLQKQTENVDENKTNANNSNHEPPPKK 160
+E D + S++ +NVD+ K + + +PP KK
Sbjct: 217 TELDDEQSSIKAADDNVDDEKDDDGEAGDDPPQKK 251
>SB_57367| Best HMM Match : DUF1660 (HMM E-Value=1.5)
Length = 267
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Frame = +2
Query: 86 QKQTENVDENKTNANNSNHEPPPKKHSSVVAAHYNHLEEKGLKERYNSPIFHLR----NF 253
++ E+V++ K A + + V + H+E+ ++ R+NS H R +
Sbjct: 150 EEDDEDVEKQKFEARVALERQHEEDEKEVDSIALPHIEKARVRHRHNSKHLHYRLPASSH 209
Query: 254 NNWVKSVLIQEFTDKIREKDYGRP 325
N+ +K V E + EK Y +P
Sbjct: 210 NHDLKDVDDDEDKQVVEEKIYHKP 233
>SB_37609| Best HMM Match : Extensin_2 (HMM E-Value=0.081)
Length = 1617
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 47 EEMSEFGDSELSLQKQTENVDENKTNANN 133
E S+F DS+ + EN DEN T++NN
Sbjct: 26 ESFSDFDDSDFDQESLVEN-DENSTSSNN 53
>SB_3900| Best HMM Match : DUF1070 (HMM E-Value=1)
Length = 500
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +2
Query: 341 ICCGKGGDLSKWQKVRPEHAIFADIAEVSVQQCETRYEELRRRC 472
+CCG G +S W H + + A+ +++ E+ Y L C
Sbjct: 317 VCCGDYGQVSPWGNKEGPHDMLEEWAQGNIRWFESDYRCLCEDC 360
>SB_37320| Best HMM Match : GP46 (HMM E-Value=5)
Length = 555
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +2
Query: 320 RPLRILDICCGKGGDLSKWQKVRPEHAIFADIAEVSVQQCETRYEELRRRCG 475
RP ++ +CCG G + W+ H + + A+ +++ E+ Y CG
Sbjct: 504 RPCQV--VCCGDYGQVPPWEDKEGPHDMLEEWAQGNIRWFESDYRCPCEDCG 553
>SB_52346| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.3)
Length = 178
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2
Query: 62 FGDSELSLQKQTENVDENKTNANNSNHEPPPKK 160
FG EL L+ TE +E N N PKK
Sbjct: 60 FGHVELMLESDTEEKEEGTKNTENDTIRKHPKK 92
>SB_15397| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +2
Query: 38 QEFEEMSEFGDSELSLQKQTENVDENKTNANNSNHEPPPKKHSSVVAAHYNHLEEKGLKE 217
Q EE F D +LQ+ E ++E AN + E PKK + L++ G+K+
Sbjct: 105 QFMEEERLFSDKLYNLQRTKEKLEEQIDLANKALMEATPKKKPNFFK---KVLQKAGIKK 161
Query: 218 RYN--SPIFHLRN 250
+ + +P+ LR+
Sbjct: 162 KKDAKNPVHLLRH 174
>SB_9386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/55 (21%), Positives = 23/55 (41%)
Frame = +2
Query: 86 QKQTENVDENKTNANNSNHEPPPKKHSSVVAAHYNHLEEKGLKERYNSPIFHLRN 250
+ +E N TN N PK H H N++++ +++ +F +N
Sbjct: 90 ESNSEITTRNTTNEINGTESNLPKNHGEATKVHENNIQKSEIRDE-TIQVFSTKN 143
>SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1087
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +2
Query: 38 QEFEEMSEFGDSELSLQKQTENVDENKTNANNSNHEPPPKKHSSVVAAHYNHLEEKGLKE 217
Q EE F D +LQ+ E ++E AN + E PKK + L++ G+K+
Sbjct: 324 QFMEEERLFSDKLYNLQRTKEKLEEQIDLANKALMEATPKKKPNFFK---KVLQKAGIKK 380
Query: 218 RYN--SPIFHLRN 250
+ + +P+ LR+
Sbjct: 381 KKDAKNPVHLLRH 393
>SB_36161| Best HMM Match : SecIII_SopE_N (HMM E-Value=4.1)
Length = 535
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 101 NVDENKTNANNSNHEPPPKKHSSVVAAHYNHLEEKG 208
NV N +N NS+ PPP K S+ + + ++++G
Sbjct: 67 NVTSNSSNQQNSS--PPPSKQSNGLKTKFKKIKKEG 100
>SB_7361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 134 SNHEPPPKKHSSVVAAHYNHLEEK-GLKERYNS 229
SN +PPPK+ ++ H N K +K+ YNS
Sbjct: 217 SNRQPPPKRSNNAFCKHVNATGAKICVKQVYNS 249
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,935,915
Number of Sequences: 59808
Number of extensions: 370537
Number of successful extensions: 1356
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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