Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_O03
         (688 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   3.0  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    24   3.9  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   5.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.0  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 122  NANNSNHEPPPKKHSSVVAAHYNHLEEKGLKERYNSPIFHLRNFNN 259
            N  +S  E  PK++    +  YNH+ E  L   ++ PI   RN+ N
Sbjct: 1689 NDGSSQTEMKPKQNCVNSSNTYNHVAESILHAVHDEPIG--RNYGN 1732


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 437 CETRYEELRRRCGRLFSAEFIATDCTKDXLRD 532
           C  R     RRC R +  + I+ DC     RD
Sbjct: 420 CPVRINIPSRRCYRCWQTDHISQDCCGPDRRD 451


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 284 LGLEHFSPSC*NSLSEILGNCIVLLDL 204
           L + HFS S    LS+  G+ IV LDL
Sbjct: 191 LSVFHFSASLSTRLSKKCGSSIVTLDL 217


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/19 (47%), Positives = 14/19 (73%), Gaps = 2/19 (10%)
 Frame = +2

Query: 149 PPKKH--SSVVAAHYNHLE 199
           PP  H  ++ VAAH++HL+
Sbjct: 861 PPSTHHQAAAVAAHHHHLQ 879


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,237
Number of Sequences: 2352
Number of extensions: 12021
Number of successful extensions: 85
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 85
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)