Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_O03
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81038-12|CAB02758.2| 380|Caenorhabditis elegans Hypothetical p... 157 9e-39
AL032636-5|CAA21607.2| 500|Caenorhabditis elegans Hypothetical ... 31 0.77
U28993-8|AAK31496.1| 632|Caenorhabditis elegans C.elegans homeo... 31 1.0
U28993-7|AAL27244.1| 641|Caenorhabditis elegans C.elegans homeo... 31 1.0
AC006774-6|AAF60619.1| 129|Caenorhabditis elegans Hypothetical ... 30 1.3
Z70038-5|CAD36503.2| 192|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL021487-13|CAA16356.3| 326|Caenorhabditis elegans Hypothetical... 29 3.1
Z81459-1|CAB03827.3| 731|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z79604-6|CAB97241.2| 731|Caenorhabditis elegans Hypothetical pr... 29 4.1
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 29 4.1
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 29 4.1
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 29 4.1
AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical ... 29 4.1
AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical ... 29 4.1
Z79753-6|CAI91165.1| 218|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z79753-5|CAE17798.1| 170|Caenorhabditis elegans Hypothetical pr... 28 5.4
U80030-12|AAG24159.1| 391|Caenorhabditis elegans Hypothetical p... 28 5.4
U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical pr... 28 5.4
AC024853-4|AAK68586.1| 746|Caenorhabditis elegans Hypothetical ... 28 5.4
Z46935-3|CAE48508.1| 794|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z46935-2|CAA87052.1| 792|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF043699-4|AAB97568.1| 610|Caenorhabditis elegans Serotonin/oct... 28 7.2
AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical... 27 9.5
>Z81038-12|CAB02758.2| 380|Caenorhabditis elegans Hypothetical
protein C25A1.3 protein.
Length = 380
Score = 157 bits (380), Expect = 9e-39
Identities = 79/178 (44%), Positives = 108/178 (60%), Gaps = 3/178 (1%)
Frame = +2
Query: 164 SSVVAAHYNHLEEKGLKERYNSPIFHLRNFNNWVKSVLIQEFTDKIREKDYGRPLRILDI 343
SS VA+HYN + + G++ R S IF +RN NNWVKS LI + ++ + P R+LD+
Sbjct: 3 SSEVASHYNKVLQVGIEGRKESRIFFMRNMNNWVKSQLINDAKQRVNDNGVNNP-RVLDL 61
Query: 344 CCGKGGDLSKWQKVRPEHAIFADIAEVSVQQCETRYEEL-RRRCGRLFSAEFIATDCTKD 520
CGKGGDL KW + + AD+A+VS+QQ E RY+++ + +F+ +FI DCTK+
Sbjct: 62 ACGKGGDLKKWDIAGAKDVVMADVADVSIQQAEERYKQMFGYKKNNIFTVQFIVADCTKE 121
Query: 521 XLRDKY--KDPSXSFDIVSCQFGLXXSFEXLLXXRXMLTNISECLKPGGYXFGTIPNA 688
L D+ KDP FD+VSCQF L SF R L N LKPGG GT+P+A
Sbjct: 122 NLEDRIENKDP---FDLVSCQFALHYSFVDEASARIFLKNAVGMLKPGGVFIGTLPDA 176
>AL032636-5|CAA21607.2| 500|Caenorhabditis elegans Hypothetical
protein Y40B1B.8 protein.
Length = 500
Score = 31.1 bits (67), Expect = 0.77
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 41 EFEEMSEFGDSELSLQKQTENVDENKTNANNSNHEPPPKK 160
+F+ ++F S L E+ ++ N NH PPP K
Sbjct: 22 DFQYQNDFSSSSHQLPSTASGYSEHSSHQNFQNHSPPPGK 61
>U28993-8|AAK31496.1| 632|Caenorhabditis elegans C.elegans homeobox
protein 38,isoform a protein.
Length = 632
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 32 SRQEFEEMSEFGDSELSLQKQTENVDENKTNANNSNHE--PPPK 157
S ++ EE+ E DSEL+ ++ E DE + + +N + P PK
Sbjct: 561 SHEDDEELDELNDSELAYEEDVEIGDEEEEDEEQANGDILPTPK 604
>U28993-7|AAL27244.1| 641|Caenorhabditis elegans C.elegans homeobox
protein 38,isoform b protein.
Length = 641
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 32 SRQEFEEMSEFGDSELSLQKQTENVDENKTNANNSNHE--PPPK 157
S ++ EE+ E DSEL+ ++ E DE + + +N + P PK
Sbjct: 570 SHEDDEELDELNDSELAYEEDVEIGDEEEEDEEQANGDILPTPK 613
>AC006774-6|AAF60619.1| 129|Caenorhabditis elegans Hypothetical
protein Y46H3A.5 protein.
Length = 129
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = +1
Query: 193 SGRKRSKRTIQFPNISLKEFQQLG--EKCSNP 282
SG+ +++ FPN+S K+F ++ +CSNP
Sbjct: 88 SGKSANRQFADFPNLSAKKFAEIAAHPRCSNP 119
>Z70038-5|CAD36503.2| 192|Caenorhabditis elegans Hypothetical
protein ZK1067.8 protein.
Length = 192
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +2
Query: 371 KWQKVRPEHAIFADIAEVSVQQCETRYEELRRRCGRLFSAEFIATDCTKDXLRD 532
++Q+VR ++ + + E +Q+CET YE+ +F FI C +D +++
Sbjct: 81 QYQEVREDYLLLKKLIEEGLQKCETIYEKGPLSTPVVF---FILDQCDEDEVQN 131
>AL021487-13|CAA16356.3| 326|Caenorhabditis elegans Hypothetical
protein Y45F10B.5 protein.
Length = 326
Score = 29.1 bits (62), Expect = 3.1
Identities = 28/81 (34%), Positives = 33/81 (40%)
Frame = -1
Query: 538 VFISKGVFXTIRSNEFG*KEPTASPTKFFVTSFALLNGNLSYVSENCMFRPNFLPFT*IS 359
VFI VF N G +E T +P FFV A L +S+ R LPFT I
Sbjct: 41 VFIILKVFKCYFRNLVGKQEATMNPHVFFVIVTAQLTSIFFMLSDYITIR---LPFTGIL 97
Query: 358 TFSTADV*NTERTAVVFFAYF 296
T A V+FF F
Sbjct: 98 TSWCASQQPNHLLKVLFFYTF 118
>Z81459-1|CAB03827.3| 731|Caenorhabditis elegans Hypothetical
protein C03H12.1 protein.
Length = 731
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 29 VSRQE--FEEMSEFGDSELSLQKQTENVDENKTNANNSNHEP 148
V R+E FEE S E S ++Q+E DENK S+ EP
Sbjct: 18 VERKEDSFEEESH-SSQESSSEQQSEAGDENKEEVEGSDEEP 58
>Z79604-6|CAB97241.2| 731|Caenorhabditis elegans Hypothetical
protein C03H12.1 protein.
Length = 731
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 29 VSRQE--FEEMSEFGDSELSLQKQTENVDENKTNANNSNHEP 148
V R+E FEE S E S ++Q+E DENK S+ EP
Sbjct: 18 VERKEDSFEEESH-SSQESSSEQQSEAGDENKEEVEGSDEEP 58
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/62 (24%), Positives = 25/62 (40%)
Frame = +2
Query: 74 ELSLQKQTENVDENKTNANNSNHEPPPKKHSSVVAAHYNHLEEKGLKERYNSPIFHLRNF 253
+++ Q+ N TN P + YNH+E+ G+ +R P F+ N
Sbjct: 332 QMNEQRTDNNRMRENTNGQGGMFNRQPSLEQTTPMNKYNHVEDDGMNQR---PTFYTGNS 388
Query: 254 NN 259
N
Sbjct: 389 EN 390
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/62 (24%), Positives = 25/62 (40%)
Frame = +2
Query: 74 ELSLQKQTENVDENKTNANNSNHEPPPKKHSSVVAAHYNHLEEKGLKERYNSPIFHLRNF 253
+++ Q+ N TN P + YNH+E+ G+ +R P F+ N
Sbjct: 332 QMNEQRTDNNRMRENTNGQGGMFNRQPSLEQTTPMNKYNHVEDDGMNQR---PTFYTGNS 388
Query: 254 NN 259
N
Sbjct: 389 EN 390
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/62 (24%), Positives = 25/62 (40%)
Frame = +2
Query: 74 ELSLQKQTENVDENKTNANNSNHEPPPKKHSSVVAAHYNHLEEKGLKERYNSPIFHLRNF 253
+++ Q+ N TN P + YNH+E+ G+ +R P F+ N
Sbjct: 332 QMNEQRTDNNRMRENTNGQGGMFNRQPSLEQTTPMNKYNHVEDDGMNQR---PTFYTGNS 388
Query: 254 NN 259
N
Sbjct: 389 EN 390
>AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical
protein W05F2.4b protein.
Length = 806
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 35 RQEFEEMSEFGDSELS-LQKQTENVDENKTNANNSNHEPPP 154
R +F+E ++ D L+K+ + D+N + NN +PPP
Sbjct: 37 RSKFKEAIDYLDQIFEDLKKECDPDDKNNNDENNKPFDPPP 77
>AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical
protein W05F2.4a protein.
Length = 834
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 35 RQEFEEMSEFGDSELS-LQKQTENVDENKTNANNSNHEPPP 154
R +F+E ++ D L+K+ + D+N + NN +PPP
Sbjct: 65 RSKFKEAIDYLDQIFEDLKKECDPDDKNNNDENNKPFDPPP 105
>Z79753-6|CAI91165.1| 218|Caenorhabditis elegans Hypothetical
protein F20G2.6b protein.
Length = 218
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 68 DSELSLQKQTENVDENKTNANNSNHEP-PPKKHSSVVAAHYNHLEEKGLKERYNSPIFHL 244
D+E+S N N+ N +N+ P PP ++ V+A + + L + Y +P+ L
Sbjct: 100 DTEISCNNFNSNSSFNRNNNSNNTSNPSPPSYYAEVMATNSSALYPVYVPP-YAAPLMSL 158
Query: 245 RN 250
R+
Sbjct: 159 RD 160
>Z79753-5|CAE17798.1| 170|Caenorhabditis elegans Hypothetical
protein F20G2.6a protein.
Length = 170
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 68 DSELSLQKQTENVDENKTNANNSNHEP-PPKKHSSVVAAHYNHLEEKGLKERYNSPIFHL 244
D+E+S N N+ N +N+ P PP ++ V+A + + L + Y +P+ L
Sbjct: 52 DTEISCNNFNSNSSFNRNNNSNNTSNPSPPSYYAEVMATNSSALYPVYVPP-YAAPLMSL 110
Query: 245 RN 250
R+
Sbjct: 111 RD 112
>U80030-12|AAG24159.1| 391|Caenorhabditis elegans Hypothetical
protein K12D9.1 protein.
Length = 391
Score = 28.3 bits (60), Expect = 5.4
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Frame = +2
Query: 269 SVLIQEFTDKIREKDYGRPLRILDICCGKG-GDLSKWQKVRPEHAIFADIAEVSVQQCET 445
S LI F + I+EK R+LD+ CG+G + + DI E +++ +
Sbjct: 185 SGLIPAFGNGIKEKLEDGGFRVLDVGCGEGFHSCLLAENYSKSQFVGLDICEKAIKSAKL 244
Query: 446 RYEELRRRCGRLF-SAEFIATDCTKDXLRDKYKDPSXSFDIVSCQFGLXXSFEXLLXXRX 622
++ G F + EF+ D +D + FD+V+ FG S LL
Sbjct: 245 N----KKSDGSDFQNLEFVVGDA-----MIMPEDWTGCFDLVAF-FG---SLHDLLRPDL 291
Query: 623 MLTNISECLKPGG 661
L + LKPGG
Sbjct: 292 SLLEVHRVLKPGG 304
>U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical
protein D1014.5 protein.
Length = 727
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +2
Query: 32 SRQEFEEMSEFGDSELSLQKQTENVDENKTNANNSNHEPPPKKHSSVVAAHYNHLEEKGL 211
S Q+ E ++ + S +EN ++T+A+ + +EP P K S A +E G+
Sbjct: 57 SDQQKEVVNSNSSNTESKNAGSENPGSSETSADQTANEPKPDKVSDDNAGSAETIESNGI 116
Query: 212 KE----RYNSPIF 238
++ +SPIF
Sbjct: 117 EKIPSNDTSSPIF 129
>AC024853-4|AAK68586.1| 746|Caenorhabditis elegans Hypothetical
protein Y71F9AR.3 protein.
Length = 746
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 35 RQEFEEMSEFGDSELSLQKQTENVDENKTNANNS 136
RQ+ E S F D + + TEN+ NK+ N S
Sbjct: 305 RQKIGEDSSFSDFDSLFDQLTENLSHNKSQENRS 338
>Z46935-3|CAE48508.1| 794|Caenorhabditis elegans Hypothetical
protein M106.4b protein.
Length = 794
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +2
Query: 71 SELSLQKQTENVDENKTNANNSNHEPPPKK 160
SE ++++ + +D N+ + +++N PPPKK
Sbjct: 46 SEHTMKRSSSMLDINEDSQHSTNKAPPPKK 75
>Z46935-2|CAA87052.1| 792|Caenorhabditis elegans Hypothetical
protein M106.4a protein.
Length = 792
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +2
Query: 71 SELSLQKQTENVDENKTNANNSNHEPPPKK 160
SE ++++ + +D N+ + +++N PPPKK
Sbjct: 46 SEHTMKRSSSMLDINEDSQHSTNKAPPPKK 75
>AF043699-4|AAB97568.1| 610|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 3 protein.
Length = 610
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 11/62 (17%)
Frame = +2
Query: 68 DSELSLQKQTENVDENKTNANNSNHE-----------PPPKKHSSVVAAHYNHLEEKGLK 214
DS ++ T D+N + +NN+N+ KK S +A+ +NHL +G K
Sbjct: 408 DSNEKTEQLTNQTDDNFSMSNNNNNGDEKEAFDESLLSESKKKSKSLASKFNHLMRRGQK 467
Query: 215 ER 220
+R
Sbjct: 468 KR 469
>AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical
protein F33D4.6b protein.
Length = 648
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +2
Query: 83 LQKQTENVDENKTNANNSNHEPPPKKHSSVVAAHYNHLEEK 205
LQK+ E V+E PPKK + +H +EK
Sbjct: 377 LQKENEKVEEKPVEEEEEATTEPPKKKRKMRKSHKTSKKEK 417
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,327,268
Number of Sequences: 27780
Number of extensions: 294174
Number of successful extensions: 1045
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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