Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_O02
(782 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O60869 Cluster: Endothelial differentiation-related fac... 197 2e-49
UniRef50_Q6A207 Cluster: Multi bridging factor1 homologue; n=1; ... 163 6e-39
UniRef50_Q9SJI8 Cluster: Expressed protein; n=4; Magnoliophyta|R... 138 1e-31
UniRef50_Q6BXQ8 Cluster: Multiprotein-bridging factor 1; n=2; Di... 138 1e-31
UniRef50_O14467 Cluster: Multiprotein-bridging factor 1; n=12; E... 130 4e-29
UniRef50_Q7YW76 Cluster: Endothelial differentiation-related fac... 128 2e-28
UniRef50_Q8TG23 Cluster: Putative multi-protein-binding factor 1... 121 2e-26
UniRef50_Q8LE67 Cluster: Ethylene-responsive transcriptional coa... 112 8e-24
UniRef50_Q5CU92 Cluster: Multiprotein bridging factor type 1 lik... 91 4e-17
UniRef50_A4HQN1 Cluster: Putative transcription factor MBF 1; n=... 89 9e-17
UniRef50_A6S7S8 Cluster: Putative uncharacterized protein; n=2; ... 87 5e-16
UniRef50_Q4UAU5 Cluster: Multiprotein bridging factor (Type 1), ... 85 1e-15
UniRef50_P14327 Cluster: Vegetative-specific protein H7; n=4; Di... 83 6e-15
UniRef50_Q871W6 Cluster: Multiprotein-bridging factor 1; n=16; A... 80 5e-14
UniRef50_Q4QDK2 Cluster: Putative uncharacterized protein; n=6; ... 78 3e-13
UniRef50_A5K4U4 Cluster: Multiprotein bridging factor type 1, pu... 76 9e-13
UniRef50_A7K9E3 Cluster: Putative uncharacterized protein Z533L;... 73 6e-12
UniRef50_UPI000049A3A3 Cluster: Helix-turn-helix protein; n=1; E... 72 2e-11
UniRef50_UPI00006CE504 Cluster: Helix-turn-helix family protein;... 71 3e-11
UniRef50_Q2NF15 Cluster: Predicted transcriptional regulator; n=... 54 5e-06
UniRef50_Q52BY4 Cluster: Multiprotein-bridging factor 1; n=1; Ma... 50 7e-05
UniRef50_Q8PY59 Cluster: Zinc finger protein; n=4; Methanosarcin... 49 1e-04
UniRef50_A5UK32 Cluster: Predicted transcription factor; n=1; Me... 48 4e-04
UniRef50_A2DR49 Cluster: Helix-turn-helix family protein; n=1; T... 46 0.001
UniRef50_Q5V4J9 Cluster: HTH DNA-binding protein; n=5; Halobacte... 46 0.001
UniRef50_Q6KZQ6 Cluster: HTH DNA binding protein; n=4; Thermopla... 45 0.002
UniRef50_Q64BZ3 Cluster: Predicted transcription factor; n=2; en... 44 0.003
UniRef50_A6T130 Cluster: Uncharacterized conserved protein; n=1;... 44 0.006
UniRef50_A7IDH2 Cluster: Helix-turn-helix domain protein; n=1; X... 43 0.008
UniRef50_A5D4E1 Cluster: Putative uncharacterized protein; n=2; ... 43 0.010
UniRef50_Q8TY57 Cluster: Predicted transcription factor, homolog... 43 0.010
UniRef50_Q38Y87 Cluster: Putative DNA-binding protein, XRE famil... 42 0.023
UniRef50_O26825 Cluster: Conserved protein; n=1; Methanothermoba... 42 0.023
UniRef50_Q73HP0 Cluster: Transcriptional regulator, putative; n=... 40 0.053
UniRef50_A0LPM5 Cluster: Transcriptional regulator of molybdate ... 40 0.053
UniRef50_Q74N97 Cluster: NEQ143; n=1; Nanoarchaeum equitans|Rep:... 40 0.053
UniRef50_A5N9B0 Cluster: Predicted phage transcriptional regulat... 40 0.070
UniRef50_Q980M2 Cluster: Multiprotein Bridging Factor (MBP-like)... 40 0.070
UniRef50_Q2FQ48 Cluster: Transcriptional regulator, XRE family; ... 40 0.070
UniRef50_A6TTI0 Cluster: Putative transcriptional regulator, XRE... 40 0.093
UniRef50_A2BLW5 Cluster: Conserved archaeal protein; n=1; Hypert... 40 0.093
UniRef50_A0B6C6 Cluster: Transcriptional regulator, XRE family; ... 40 0.093
UniRef50_Q047Y9 Cluster: Transcriptional regulator, xre family; ... 39 0.12
UniRef50_Q8SWK3 Cluster: Putative uncharacterized protein ECU01_... 39 0.12
UniRef50_A5CZG2 Cluster: Hypothetical transcriptional regulator;... 39 0.16
UniRef50_O28302 Cluster: Putative uncharacterized protein; n=1; ... 39 0.16
UniRef50_Q88UW0 Cluster: Putative uncharacterized protein lp_234... 38 0.21
UniRef50_Q0W256 Cluster: Putative transcription factor; n=1; unc... 38 0.28
UniRef50_O30257 Cluster: Uncharacterized HTH-type transcriptiona... 38 0.28
UniRef50_UPI00015BB0A5 Cluster: transcriptional regulator, XRE f... 37 0.50
UniRef50_Q3DNV7 Cluster: Transcriptional regulator, Cro/CI famil... 37 0.50
UniRef50_A3H8F8 Cluster: Transcriptional regulator, XRE family; ... 37 0.50
UniRef50_Q9X8B2 Cluster: Putative DNA-binding protein; n=1; Stre... 37 0.65
UniRef50_A6LAD6 Cluster: Putative uncharacterized protein; n=2; ... 37 0.65
UniRef50_Q039U4 Cluster: Transcriptional regulator, xre family; ... 36 0.86
UniRef50_A5KM56 Cluster: Putative uncharacterized protein; n=1; ... 36 0.86
UniRef50_A3VUS8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.86
UniRef50_A0Q3S9 Cluster: Transcriptional regulator, MerR family;... 36 0.86
UniRef50_Q3ER79 Cluster: Transcriptional regulator; n=2; Bacillu... 36 1.1
UniRef50_A6TK93 Cluster: Plasmid maintenance system antidote pro... 36 1.1
UniRef50_A6NZM6 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q2Y8T7 Cluster: Transcriptional regulator, XRE family; ... 36 1.5
UniRef50_Q4UUY9 Cluster: Transcriptional regulator, HTH_3 family... 35 2.0
UniRef50_Q03IY6 Cluster: Transcriptional regulator, xre family; ... 35 2.0
UniRef50_A7HQ26 Cluster: Helix-turn-helix domain protein; n=1; P... 35 2.0
UniRef50_A7HLN1 Cluster: Diguanylate cyclase; n=1; Fervidobacter... 35 2.0
UniRef50_A6P2G2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_A6G6R0 Cluster: Transcriptional regulator; n=2; Plesioc... 35 2.0
UniRef50_A0CWQ6 Cluster: Chromosome undetermined scaffold_3, who... 35 2.0
UniRef50_UPI000045E701 Cluster: COG1396: Predicted transcription... 35 2.6
UniRef50_Q81S88 Cluster: DNA-binding protein; n=15; Bacillus|Rep... 35 2.6
UniRef50_Q392E3 Cluster: Transcriptional regulator, XRE family; ... 35 2.6
UniRef50_Q2RSF5 Cluster: Transcriptional Regulator, XRE family; ... 35 2.6
UniRef50_O53463 Cluster: POSSIBLE TRANSCRIPTIONAL REGULATORY PRO... 35 2.6
UniRef50_Q41GJ6 Cluster: Helix-turn-helix motif; n=1; Exiguobact... 35 2.6
UniRef50_Q085U7 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_A7B1X5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_A5I039 Cluster: DNA-binding protein; n=6; Clostridium|R... 35 2.6
UniRef50_A0V350 Cluster: Plasmid maintenance system antidote pro... 35 2.6
UniRef50_Q8ZYG8 Cluster: Conserved helix-turn-helix protein; n=4... 35 2.6
UniRef50_Q5DUQ9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_Q1FJM3 Cluster: Helix-turn-helix motif; n=1; Clostridiu... 34 3.5
UniRef50_A6CG08 Cluster: Transcriptional regulator, XRE family p... 34 3.5
UniRef50_A5TRU5 Cluster: MerR family transcriptional regulator; ... 34 3.5
UniRef50_A5N1F8 Cluster: Predicted transcriptional regulator; n=... 34 3.5
UniRef50_A3I0P0 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_A1BF09 Cluster: Helix-turn-helix domain protein; n=2; C... 34 3.5
UniRef50_A0YJB7 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_Q00US1 Cluster: Chromosome 15 contig 1, DNA sequence; n... 34 3.5
UniRef50_Q5DE94 Cluster: SJCHGC08847 protein; n=1; Schistosoma j... 34 3.5
UniRef50_Q8Y3P3 Cluster: Lmo2792 protein; n=13; Listeria|Rep: Lm... 34 4.6
UniRef50_Q2B6Z1 Cluster: Putative uncharacterized protein; n=1; ... 34 4.6
UniRef50_Q18XJ5 Cluster: Transcriptional regulator, XRE family; ... 34 4.6
UniRef50_Q03I41 Cluster: Transcriptional regulator, xre family; ... 34 4.6
UniRef50_Q02WQ6 Cluster: Transcriptional regulator, xre family; ... 34 4.6
UniRef50_A6GA55 Cluster: Transcriptional regulator, XRE family p... 34 4.6
UniRef50_Q7QPV1 Cluster: GLP_433_12991_13314; n=1; Giardia lambl... 34 4.6
UniRef50_Q5QYA8 Cluster: Predicted transcriptional regulator, co... 33 6.1
UniRef50_Q2RLW5 Cluster: Transcriptional regulator, XRE family; ... 33 6.1
UniRef50_O69902 Cluster: Putative transcriptional regulator; n=1... 33 6.1
UniRef50_Q3Y0J1 Cluster: Helix-turn-helix motif; n=1; Enterococc... 33 6.1
UniRef50_Q212H0 Cluster: Transcriptional regulator, XRE family; ... 33 6.1
UniRef50_Q11WW9 Cluster: Transcriptional regulator; n=2; Bactero... 33 6.1
UniRef50_Q08UC5 Cluster: Putative transcriptional repressor; n=2... 33 6.1
UniRef50_A7FXB8 Cluster: DNA-binding protein; n=2; Clostridium b... 33 6.1
UniRef50_A6DY12 Cluster: Putative uncharacterized protein; n=1; ... 33 6.1
UniRef50_A4NX31 Cluster: Putative uncharacterized protein; n=1; ... 33 6.1
UniRef50_A3I6C0 Cluster: Putative uncharacterized protein; n=1; ... 33 6.1
UniRef50_Q54K09 Cluster: G-protein-coupled receptor (GPCR) famil... 33 6.1
UniRef50_Q298V3 Cluster: GA13041-PA; n=1; Drosophila pseudoobscu... 33 6.1
UniRef50_A3H5L3 Cluster: Transcriptional regulator, XRE family; ... 33 6.1
UniRef50_A2SSN6 Cluster: Helix-turn-helix domain protein; n=1; M... 33 6.1
UniRef50_Q81TU5 Cluster: DNA-binding protein; n=14; Bacillus cer... 33 8.1
UniRef50_Q733K6 Cluster: Helix-turn-helix domain protein; n=6; B... 33 8.1
UniRef50_Q0HYT8 Cluster: Transcriptional regulator, XRE family; ... 33 8.1
UniRef50_A3Y8G1 Cluster: Transcriptional regulator, putative; n=... 33 8.1
UniRef50_A0NKA2 Cluster: Transcriptional regulator, helix-turn-h... 33 8.1
UniRef50_P36617 Cluster: DNA repair protein rad16; n=1; Schizosa... 33 8.1
>UniRef50_O60869 Cluster: Endothelial differentiation-related factor
1; n=52; Eukaryota|Rep: Endothelial
differentiation-related factor 1 - Homo sapiens (Human)
Length = 148
Score = 197 bits (481), Expect = 2e-49
Identities = 90/133 (67%), Positives = 114/133 (85%)
Frame = +2
Query: 95 SDWDTVTILRKKPPKASALKTEQAVNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDR 274
SDWDTVT+LRKK P A+ K++QA+ AA+R+G V+T +K+ AG NKQH TKNTAKLDR
Sbjct: 4 SDWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNKQHSITKNTAKLDR 63
Query: 275 ETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGK 454
ETEEL H+++ L++GK+I QGRQ+KG++QKDLATKI EKPQ++ DYE+GR IPNN VLGK
Sbjct: 64 ETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGK 123
Query: 455 IERAIGIKLRGKE 493
IERAIG+KLRGK+
Sbjct: 124 IERAIGLKLRGKD 136
>UniRef50_Q6A207 Cluster: Multi bridging factor1 homologue; n=1;
Oikopleura dioica|Rep: Multi bridging factor1 homologue
- Oikopleura dioica (Tunicate)
Length = 144
Score = 163 bits (395), Expect = 6e-39
Identities = 78/135 (57%), Positives = 102/135 (75%)
Frame = +2
Query: 92 MSDWDTVTILRKKPPKASALKTEQAVNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLD 271
M DWD+VT++ K P + A+ A+R G ++T+QK AGTN + T + AKLD
Sbjct: 1 MDDWDSVTVISKSRPARGTANEKSALRQAQRSG-NLETRQKMFAGTNAKG-NTAHHAKLD 58
Query: 272 RETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLG 451
RETEEL+H+ + +D+GKLI +GR KGM+QK+LATKICEKPQI+N+YE G+ IPNN VLG
Sbjct: 59 RETEELKHKTLGMDVGKLIQKGRNQKGMTQKELATKICEKPQIINEYELGKSIPNNQVLG 118
Query: 452 KIERAIGIKLRGKER 496
KIERAIGIKLRGK++
Sbjct: 119 KIERAIGIKLRGKDK 133
>UniRef50_Q9SJI8 Cluster: Expressed protein; n=4; Magnoliophyta|Rep:
Expressed protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 142
Score = 138 bits (335), Expect = 1e-31
Identities = 67/134 (50%), Positives = 93/134 (69%), Gaps = 2/134 (1%)
Frame = +2
Query: 98 DWDTVTILRKKPPKASALKTEQAVNAARRQGIPVDTQQKYGAGTNK--QHVTTKNTAKLD 271
DW+ V ++RKKP A+A + E+ VNAARR G ++T +K+ AGTNK T+ NT LD
Sbjct: 10 DWEPV-VIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNTKMLD 68
Query: 272 RETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLG 451
+TE L HE++P +L K IMQ R K ++Q LA I EKPQ++ +YE+G+ IPN +L
Sbjct: 69 DDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQQILS 128
Query: 452 KIERAIGIKLRGKE 493
K+ERA+G KLRGK+
Sbjct: 129 KLERALGAKLRGKK 142
>UniRef50_Q6BXQ8 Cluster: Multiprotein-bridging factor 1; n=2;
Dikarya|Rep: Multiprotein-bridging factor 1 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 150
Score = 138 bits (334), Expect = 1e-31
Identities = 67/139 (48%), Positives = 95/139 (68%), Gaps = 6/139 (4%)
Frame = +2
Query: 92 MSDWDTVTILRKKP------PKASALKTEQAVNAARRQGIPVDTQQKYGAGTNKQHVTTK 253
MSDWD+VTI+ +K P+ + KT+ +NAARR G V T++KYG+ K + +
Sbjct: 1 MSDWDSVTIIGQKARIGGGGPRQNVAKTQAELNAARRSGNVVGTEKKYGSTNTKSNPEGQ 60
Query: 254 NTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIP 433
KLD + + +K+ +++GK I Q RQ K ++QKDLATKI EKP ++NDYEAGR +P
Sbjct: 61 RLTKLDAVDDVVPTKKLDMNVGKAIQQARQEKKLTQKDLATKINEKPNVINDYEAGRAVP 120
Query: 434 NNIVLGKIERAIGIKLRGK 490
N +LGK+ERA+G+KLRGK
Sbjct: 121 NQQLLGKLERALGVKLRGK 139
>UniRef50_O14467 Cluster: Multiprotein-bridging factor 1; n=12;
Eukaryota|Rep: Multiprotein-bridging factor 1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 151
Score = 130 bits (314), Expect = 4e-29
Identities = 65/138 (47%), Positives = 92/138 (66%), Gaps = 6/138 (4%)
Frame = +2
Query: 92 MSDWDTVTILRKKP------PKASALKTEQAVNAARRQGIPVDTQQKYGAGTNKQHVTTK 253
MSDWDT TI+ + P+A+ +++ +NAARRQG+ V +KYG+ + +
Sbjct: 1 MSDWDTNTIIGSRARAGGSGPRANVARSQGQINAARRQGLVVSVDKKYGSTNTRGDNEGQ 60
Query: 254 NTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIP 433
K+DRET+ ++ +K+ ++G+ I + R K MSQKDLATKI EKP +VNDYEA R IP
Sbjct: 61 RLTKVDRETDIVKPKKLDPNVGRAISRARTDKKMSQKDLATKINEKPTVVNDYEAARAIP 120
Query: 434 NNIVLGKIERAIGIKLRG 487
N VL K+ERA+G+KLRG
Sbjct: 121 NQQVLSKLERALGVKLRG 138
>UniRef50_Q7YW76 Cluster: Endothelial differentiation-related factor
1; n=1; Schistosoma japonicum|Rep: Endothelial
differentiation-related factor 1 - Schistosoma japonicum
(Blood fluke)
Length = 134
Score = 128 bits (309), Expect = 2e-28
Identities = 53/116 (45%), Positives = 87/116 (75%)
Frame = +2
Query: 149 LKTEQAVNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLI 328
LK+ + +AA+R+G ++T +++ AG NKQ KNTAKL+ +TE+L ++ + +D+GK+I
Sbjct: 9 LKSNSSFSAAQRRGDHIETHKRWAAGQNKQRTIEKNTAKLEEDTEDLHNDLVDMDVGKII 68
Query: 329 MQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKLRGKER 496
MQ RQ K ++QKDLATKI + +++ DYE GR + N ++ K+E+A+G+KLRGK++
Sbjct: 69 MQARQEKNLTQKDLATKITKSNKVIADYEQGRAVKNQAIISKLEKALGVKLRGKDK 124
>UniRef50_Q8TG23 Cluster: Putative multi-protein-binding factor 1;
n=1; Yarrowia lipolytica|Rep: Putative
multi-protein-binding factor 1 - Yarrowia lipolytica
(Candida lipolytica)
Length = 152
Score = 121 bits (291), Expect = 2e-26
Identities = 58/138 (42%), Positives = 87/138 (63%), Gaps = 6/138 (4%)
Frame = +2
Query: 98 DWDTVTILRKKP------PKASALKTEQAVNAARRQGIPVDTQQKYGAGTNKQHVTTKNT 259
DW++ T++ + P+A+ KT+ +NAA R G + T +KY + +K +
Sbjct: 4 DWESKTVIGSRARVGGGGPRATVAKTQAEINAAMRSGNVLSTDKKYASANSKDGGDGQRL 63
Query: 260 AKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNN 439
K+DR + + K+ +GK I++GR KG++QK+LA KI EKPQ+VNDYE+GR PN
Sbjct: 64 TKIDRSDDIIAPPKVEASVGKAIIKGRSEKGLTQKELAVKINEKPQVVNDYESGRAQPNQ 123
Query: 440 IVLGKIERAIGIKLRGKE 493
VL K+ER +GIKLRGK+
Sbjct: 124 QVLSKMERVLGIKLRGKD 141
>UniRef50_Q8LE67 Cluster: Ethylene-responsive transcriptional
coactivator, putative; n=9; Magnoliophyta|Rep:
Ethylene-responsive transcriptional coactivator,
putative - Arabidopsis thaliana (Mouse-ear cress)
Length = 148
Score = 112 bits (270), Expect = 8e-24
Identities = 57/135 (42%), Positives = 86/135 (63%), Gaps = 4/135 (2%)
Frame = +2
Query: 98 DWDTVTILRKKPPKASALKTEQAVNAARRQGIPVDTQQKYGAGTNKQHVTTK----NTAK 265
DW+ V +L K K+ L+ +AVNAA R G+ V T +K+ AG+NK+ +T NT K
Sbjct: 12 DWEPV-VLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVINTKK 70
Query: 266 LDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIV 445
L+ ETE +++ ++ +I + R K MSQ DLA +I E+ Q+V +YE G+ +PN V
Sbjct: 71 LEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVPNQAV 130
Query: 446 LGKIERAIGIKLRGK 490
L K+E+ +G+KLRGK
Sbjct: 131 LAKMEKVLGVKLRGK 145
>UniRef50_Q5CU92 Cluster: Multiprotein bridging factor type 1 like
transcriptional co-activator; n=4; Apicomplexa|Rep:
Multiprotein bridging factor type 1 like transcriptional
co-activator - Cryptosporidium parvum Iowa II
Length = 158
Score = 90.6 bits (215), Expect = 4e-17
Identities = 48/131 (36%), Positives = 79/131 (60%), Gaps = 3/131 (2%)
Frame = +2
Query: 98 DWDTVTILRKKPPKASALKTEQAVNAARRQGIPVDTQQKYGAGTN---KQHVTTKNTAKL 268
DW+ V + +K + + EQ +N ARR+G + T++K+ G N KQ++ +N AKL
Sbjct: 15 DWNQV-VWKKGGSRPKGISKEQDLNQARRKGEEIITEKKFLGGRNASTKQNIP-QNAAKL 72
Query: 269 DRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVL 448
D +T + R ++ + + + Q R AK ++Q LA I EK +VNDYE+G+ IPN I++
Sbjct: 73 DEDTGDYRIFRVSGEFSRALQQARVAKKLTQAQLAQMINEKASVVNDYESGKAIPNPILV 132
Query: 449 GKIERAIGIKL 481
K+ R +G+ L
Sbjct: 133 QKMSRCLGVNL 143
>UniRef50_A4HQN1 Cluster: Putative transcription factor MBF 1; n=1;
Nidula niveotomentosa|Rep: Putative transcription factor
MBF 1 - Nidula niveotomentosa
Length = 167
Score = 89.4 bits (212), Expect = 9e-17
Identities = 50/117 (42%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Frame = +2
Query: 92 MSD-WDTVTILRKKPPKASALKTEQAVNAARRQGIPVDTQQKYGAGTNKQHVTT--KNTA 262
MSD WD+ T++ K A K + +NAARR G V T +K AG NK H T + A
Sbjct: 46 MSDEWDSKTVIGFKRQVAKVTKKDSDLNAARRTGAVVATDKKITAGGNKAHQGTDHQRIA 105
Query: 263 KLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIP 433
KLDRE E K+ +G+ I R +SQKDLA KI EKP ++ +YE+G+ +P
Sbjct: 106 KLDRENEVAPPPKVAPSVGRAIQAARMELKLSQKDLAQKINEKPTVLQEYESGKAVP 162
>UniRef50_A6S7S8 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 208
Score = 87.0 bits (206), Expect = 5e-16
Identities = 48/142 (33%), Positives = 82/142 (57%), Gaps = 8/142 (5%)
Frame = +2
Query: 92 MSDWDTVTILRKK------PPKASALKTEQAVNAARRQGIPVDTQQKYGAGTNKQHVTTK 253
M DW++ T + K + + ++ A+NAA+R G + T++KY +G +
Sbjct: 1 MDDWESATKIGKNVRGGAGANRETVIRGAAALNAAKRSGGAITTEKKYASGNAGSSGEGQ 60
Query: 254 NTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGM-SQKDLATKICE-KPQIVNDYEAGRG 427
+ K+DR E ++ + + +++ + I GR+AK + +Q DLA K+C P+IVND E G G
Sbjct: 61 HLTKVDRSDEIIKPKTVGMEVARAIQDGRKAKNIKTQADLA-KLCNTTPKIVNDMERGVG 119
Query: 428 IPNNIVLGKIERAIGIKLRGKE 493
P+ VL +ER +G+KLRG +
Sbjct: 120 TPDQKVLNNMERVLGVKLRGND 141
>UniRef50_Q4UAU5 Cluster: Multiprotein bridging factor (Type 1),
putative; n=5; Aconoidasida|Rep: Multiprotein bridging
factor (Type 1), putative - Theileria annulata
Length = 145
Score = 85.4 bits (202), Expect = 1e-15
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Frame = +2
Query: 86 LNMSDWDTVTILRKKPPKASALKTEQAVNAARRQGIPVDTQQKYGAGTNK--QHVTTKNT 259
++ DW V + + K E A+N ARR G+ +DTQ+K+ G NK + N
Sbjct: 1 MSYQDWKPVVWTKHENFKGP--NKESALNKARRAGVELDTQKKFLGGQNKTTKSFLPPNA 58
Query: 260 AKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNN 439
AK++ E E E++ + + R AK M+Q LA I E ++ +YE G GIPN
Sbjct: 59 AKIENENESFHIERVSFAFRTALQKARMAKNMTQIQLARAINENETLIKEYENGSGIPNG 118
Query: 440 IVLGKIERAIGIKL 481
V+ K+ R +G+KL
Sbjct: 119 QVIQKLNRVLGVKL 132
>UniRef50_P14327 Cluster: Vegetative-specific protein H7; n=4;
Dictyostelium discoideum|Rep: Vegetative-specific
protein H7 - Dictyostelium discoideum (Slime mold)
Length = 104
Score = 83.4 bits (197), Expect = 6e-15
Identities = 41/99 (41%), Positives = 63/99 (63%)
Frame = +2
Query: 197 VDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLAT 376
+D Q KYGAG NK + N K+ E++ ++ + + I + R A M+QK+LA
Sbjct: 1 MDVQTKYGAGQNKV-LGGANQKKIAESEEDIALPELNPSVPQAIQRARNALKMTQKELAF 59
Query: 377 KICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKLRGKE 493
KI E+P ++N+YE+G IP+ VL K+E+A+ +KLRGKE
Sbjct: 60 KINERPGVINEYESGSAIPSQAVLSKLEKALNVKLRGKE 98
>UniRef50_Q871W6 Cluster: Multiprotein-bridging factor 1; n=16;
Ascomycota|Rep: Multiprotein-bridging factor 1 -
Neurospora crassa
Length = 160
Score = 80.2 bits (189), Expect = 5e-14
Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 14/148 (9%)
Frame = +2
Query: 92 MSDWDTVTILRKKP-------PKASALKTEQAVNAARRQGIPVDTQQKYGAGT--NKQHV 244
MS WDT + K P+ + ++ + A+NAA+R G + T++KY AG +K V
Sbjct: 1 MSAWDTDAVKIGKNVSRGGAGPRETVVRGKSALNAAQRSGNIIATEKKYAAGNTASKPGV 60
Query: 245 TTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQA-----KGMSQKDLATKICEKPQIVND 409
+ +DR + ++ + + ++G I + R A K M+QK+LAT+ I+
Sbjct: 61 EGQRLTMVDRSDDIVKPKTVSKEVGAAIQKARSAIMIGDKAMTQKELATRCNSTQAIIAQ 120
Query: 410 YEAGRGIPNNIVLGKIERAIGIKLRGKE 493
YE G G+P+ +LG +ER + +KLRG +
Sbjct: 121 YERGEGVPDQKLLGNLERVLNVKLRGSD 148
>UniRef50_Q4QDK2 Cluster: Putative uncharacterized protein; n=6;
Trypanosomatidae|Rep: Putative uncharacterized protein -
Leishmania major
Length = 163
Score = 77.8 bits (183), Expect = 3e-13
Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Frame = +2
Query: 155 TEQAVNAARRQGIPVDTQQKYGAGTNKQHVTT-KNTAKLDRETEELRHEKIPLDLGKLIM 331
TE+ N A + G V Q+K N+Q V+ N KLD + E L+ +K+ L IM
Sbjct: 34 TERDANRAMQSGQNVQVQRKEHQRFNQQTVSAGANAKKLDEDNETLKVKKVDPHLRVRIM 93
Query: 332 QGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKLRG 487
+ RQA SQ+DLA +I E+ +V +YE+G+ + V+ K+E+A+G+ LRG
Sbjct: 94 KERQALNWSQQDLAQRISERVSVVAEYESGKAVQEERVIVKMEKALGVHLRG 145
>UniRef50_A5K4U4 Cluster: Multiprotein bridging factor type 1,
putative; n=2; Plasmodium|Rep: Multiprotein bridging
factor type 1, putative - Plasmodium vivax
Length = 136
Score = 76.2 bits (179), Expect = 9e-13
Identities = 34/108 (31%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Frame = +2
Query: 167 VNAARRQGIPVDTQQKYGAGTNKQ---HVTTKNTAKLDRETEELRHEKIPLDLGKLIMQG 337
+ AR+ GI V+ ++K+ G NK ++ +N AK+++ETE + +++ + + Q
Sbjct: 23 IGEARKLGIDVEVEKKFLGGKNKSCKGNLIIENKAKIEQETENFKIDRVTPVFSRALQQA 82
Query: 338 RQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
R K ++Q LA + E ++ +YE G+ IPNN+++ K+ R +GI L
Sbjct: 83 RINKKLTQSQLARLVNESESVIKEYENGKAIPNNVIIQKLNRVLGINL 130
>UniRef50_A7K9E3 Cluster: Putative uncharacterized protein Z533L;
n=1; Chlorella virus ATCV-1|Rep: Putative
uncharacterized protein Z533L - Chlorella virus ATCV-1
Length = 127
Score = 73.3 bits (172), Expect = 6e-12
Identities = 45/133 (33%), Positives = 73/133 (54%)
Frame = +2
Query: 86 LNMSDWDTVTILRKKPPKASALKTEQAVNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAK 265
++ DWDTV I++KK VN + R + + +K T K+ TT N AK
Sbjct: 7 MDHQDWDTV-IIKKK------------VNVSGR--VTAEEIRKGAFETVKKTTTTTNMAK 51
Query: 266 LDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIV 445
++R+T + + + L + I+ R AK M++ LA KI EKP+++ YE + +P+ V
Sbjct: 52 IERDTTDAAPKTVSTKLAQAIISARTAKKMTRDQLAVKINEKPKVIELYETKKAVPDPAV 111
Query: 446 LGKIERAIGIKLR 484
L K+ RA+G+ LR
Sbjct: 112 LSKMSRALGVSLR 124
>UniRef50_UPI000049A3A3 Cluster: Helix-turn-helix protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: Helix-turn-helix
protein - Entamoeba histolytica HM-1:IMSS
Length = 125
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/75 (45%), Positives = 49/75 (65%)
Frame = +2
Query: 263 KLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNI 442
K D L H+++ + I + RQ K ++QK+LA KI EKPQ + DYE+G+ IP+
Sbjct: 49 KADEGETPLVHKQVSHKVSLEIQRARQEKHLTQKELAQKINEKPQTIADYESGKAIPSQQ 108
Query: 443 VLGKIERAIGIKLRG 487
VL K+ER +G+KLRG
Sbjct: 109 VLAKLERILGVKLRG 123
>UniRef50_UPI00006CE504 Cluster: Helix-turn-helix family protein;
n=1; Tetrahymena thermophila SB210|Rep: Helix-turn-helix
family protein - Tetrahymena thermophila SB210
Length = 132
Score = 70.9 bits (166), Expect = 3e-11
Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = +2
Query: 152 KTEQAVNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIM 331
K E+A A QG+ V+ +K N ++ + AK+ E +E + + + D +
Sbjct: 18 KGEKATKQALHQGLAVEHVKK-NVTNNPSNLDGRYVAKVLNE-DEYKVDTVSHDFRIALQ 75
Query: 332 QGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL-RGKER 496
Q RQAKG +Q+ LA CEK +++DYE+GR IP+ + K E A+G KL R K++
Sbjct: 76 QARQAKGWTQEQLAKACCEKKSVISDYESGRAIPHPSTITKFESALGCKLPRDKKK 131
>UniRef50_Q2NF15 Cluster: Predicted transcriptional regulator; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: Predicted
transcriptional regulator - Methanosphaera stadtmanae
(strain DSM 3091)
Length = 164
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/84 (30%), Positives = 48/84 (57%)
Frame = +2
Query: 230 NKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVND 409
N Q+ T + R+++E +E + D K I Q R+ K ++ K L KI E+ ++ +
Sbjct: 51 NNQNRRTNSNRPYTRKSKEEEYELVD-DYEKTIKQAREKKNLTHKQLGEKIYERESVIAN 109
Query: 410 YEAGRGIPNNIVLGKIERAIGIKL 481
E G+ +P+N + K+E+A+ IK+
Sbjct: 110 IETGKMVPDNKIAHKLEKALHIKI 133
>UniRef50_Q52BY4 Cluster: Multiprotein-bridging factor 1; n=1;
Magnaporthe grisea|Rep: Multiprotein-bridging factor 1 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 161
Score = 50.0 bits (114), Expect = 7e-05
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Frame = +2
Query: 98 DWDTVTILRKKP-------PKASALKTEQAVNAARRQGIPVDTQQKYGAGTNKQHVTTKN 256
DWDTVT + + P+ + +K + +NAA+R G V T++KYG + +
Sbjct: 4 DWDTVTKIGSRVGGGGGGGPRLTTIKNKSQLNAAQRAGGIVGTEKKYGTANSSRSEAGSG 63
Query: 257 --TAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQK-DLATKICEKPQIVNDYEAGRG 427
K+DR + ++ + +LG IMQ R+ K + + + K+ + + E G
Sbjct: 64 QFLTKVDRSDDIVKPKTGDKELGMYIMQNREQKKLGNRLEFGKKVGINEKDLARIEKGEV 123
Query: 428 IPNNIVLGKIERAIGIKLRGKER 496
+ +IER + + +RG ++
Sbjct: 124 PITQDQVNRIERGLEMFIRGVKK 146
>UniRef50_Q8PY59 Cluster: Zinc finger protein; n=4;
Methanosarcinaceae|Rep: Zinc finger protein -
Methanosarcina mazei (Methanosarcina frisia)
Length = 161
Score = 49.2 bits (112), Expect = 1e-04
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Frame = +2
Query: 119 LRKKPPKASALKTE-QAVNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETE-ELR 292
+R KP + +E Q G PVD + + T T K ++ ++
Sbjct: 10 IRGKPISVTIDNSELQVCQKCAPYGKPVDKRSPVSRKVSPVVRTVPRTEKRPKKDFFDIL 69
Query: 293 HEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIG 472
+++ D +I + R+A+G SQ+DLA I EK ++ E +P + V K+E A+
Sbjct: 70 KDELLDDYDHIIREAREARGWSQEDLAENIKEKASLIKKIERSEIVPEDSVRKKLEHALN 129
Query: 473 IKL 481
IKL
Sbjct: 130 IKL 132
>UniRef50_A5UK32 Cluster: Predicted transcription factor; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Predicted
transcription factor - Methanobrevibacter smithii
(strain PS / ATCC 35061 / DSM 861)
Length = 160
Score = 47.6 bits (108), Expect = 4e-04
Identities = 28/83 (33%), Positives = 45/83 (54%)
Frame = +2
Query: 233 KQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDY 412
K++ TTK D EEL D I + R++K +S+++L KI EK ++N
Sbjct: 52 KKNKTTKQNYSKDEPKEELVE-----DFNVKIRKARESKNLSREELGQKIYEKVSVINRI 106
Query: 413 EAGRGIPNNIVLGKIERAIGIKL 481
E+G+ IP+ + K+E A+ I L
Sbjct: 107 ESGKMIPDIRLTKKLENALNITL 129
>UniRef50_A2DR49 Cluster: Helix-turn-helix family protein; n=1;
Trichomonas vaginalis G3|Rep: Helix-turn-helix family
protein - Trichomonas vaginalis G3
Length = 112
Score = 46.0 bits (104), Expect = 0.001
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Frame = +2
Query: 218 GAGTNKQHVTT--KNTAKLDRETEEL--RHEKIPLDLGKLIMQGRQAKGMSQKDLATKIC 385
GAG K+HV + K A ++ + + +K+ +++ I R AK +QKDLA
Sbjct: 21 GAG-QKKHVDSHAKKFAMIENDNDHFGDHRQKVGIEMANKIKNLRNAKEWTQKDLALHAG 79
Query: 386 EKPQIVNDYEAGRGIPNNIVLGKIERAIGIKLR 484
K +V DYE+G PN ++ + E+ + LR
Sbjct: 80 VKIDVVKDYESGNAEPNAKIIKRFEQVLEGPLR 112
>UniRef50_Q5V4J9 Cluster: HTH DNA-binding protein; n=5;
Halobacteriaceae|Rep: HTH DNA-binding protein -
Haloarcula marismortui (Halobacterium marismortui)
Length = 175
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/62 (32%), Positives = 39/62 (62%)
Frame = +2
Query: 296 EKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 475
+++ D I +GR+++G+SQ++LA ++ EK ++ E G +P++ V K+E A+ I
Sbjct: 84 DEVAQDYDDRIRKGRESQGLSQEELAKQLNEKASLIRKLEQGNSLPSDDVQKKLESALEI 143
Query: 476 KL 481
L
Sbjct: 144 SL 145
>UniRef50_Q6KZQ6 Cluster: HTH DNA binding protein; n=4;
Thermoplasmatales|Rep: HTH DNA binding protein -
Picrophilus torridus
Length = 146
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +2
Query: 311 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
D LI R+ M+Q+DLA K+ E+ ++++ E G +P+ K+E+ +GIKL
Sbjct: 85 DYASLIKSARERLSMTQEDLARKVLERKNVISNIERGDLLPSIETAKKLEKVLGIKL 141
>UniRef50_Q64BZ3 Cluster: Predicted transcription factor; n=2;
environmental samples|Rep: Predicted transcription
factor - uncultured archaeon GZfos26E7
Length = 147
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/90 (30%), Positives = 46/90 (51%)
Frame = +2
Query: 212 KYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEK 391
K AG +T + ++ + + +++ D G I + R+A+GMSQ++LA I EK
Sbjct: 53 KVSAGRVPAGITFRTGSRRRPDMFDQMTDELLSDYGFAIRRAREARGMSQEELALAIKEK 112
Query: 392 PQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
++ E P + V K+ER +GI L
Sbjct: 113 ASLLKKLEREDLRPEDSVRKKLERVLGISL 142
>UniRef50_A6T130 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 109
Score = 43.6 bits (98), Expect = 0.006
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +2
Query: 299 KIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIK 478
K+ + LG + Q R+A+G SQ+ LA K V + E G+ IP+ I L K+ A+G+K
Sbjct: 23 KLCVSLGLAVRQLREAQGWSQEALAEKAQLNRSYVGEVERGKTIPSLITLDKLASALGLK 82
Query: 479 L 481
+
Sbjct: 83 V 83
>UniRef50_A7IDH2 Cluster: Helix-turn-helix domain protein; n=1;
Xanthobacter autotrophicus Py2|Rep: Helix-turn-helix
domain protein - Xanthobacter sp. (strain Py2)
Length = 425
Score = 43.2 bits (97), Expect = 0.008
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +2
Query: 311 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNI-VLGKIERAIGIKLRG 487
+L ++++Q R A GMSQ DLA K+ KPQ V YEA + ++ L +I +A+G+K G
Sbjct: 75 ELPRVLVQARIASGMSQTDLAEKLRMKPQQVQRYEATDYMGASLGRLIEISKALGVKASG 134
>UniRef50_A5D4E1 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Pelotomaculum thermopropionicum SI
Length = 355
Score = 42.7 bits (96), Expect = 0.010
Identities = 18/56 (32%), Positives = 36/56 (64%)
Frame = +2
Query: 314 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
+G+ + R+A G+S ++LA ++ PQ ++ YE G IP++ VL ++ A+G+ +
Sbjct: 2 VGERLRLARRAAGLSLRELANRVGVSPQAISKYERGLDIPSSGVLLRLAEALGVNV 57
>UniRef50_Q8TY57 Cluster: Predicted transcription factor, homolog of
eukaryotic MBF1; n=1; Methanopyrus kandleri|Rep:
Predicted transcription factor, homolog of eukaryotic
MBF1 - Methanopyrus kandleri
Length = 171
Score = 42.7 bits (96), Expect = 0.010
Identities = 22/62 (35%), Positives = 38/62 (61%)
Frame = +2
Query: 296 EKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 475
E +P D + + + R+ +G SQ+DLA KI EK ++ E+G+ P+ + K+ER + I
Sbjct: 81 EVVP-DYDERVREARERRGWSQEDLAKKIGEKVSVIRRIESGKMEPDVELARKLERVLEI 139
Query: 476 KL 481
+L
Sbjct: 140 EL 141
>UniRef50_Q38Y87 Cluster: Putative DNA-binding protein, XRE family;
n=1; Lactobacillus sakei subsp. sakei 23K|Rep: Putative
DNA-binding protein, XRE family - Lactobacillus sakei
subsp. sakei (strain 23K)
Length = 284
Score = 41.5 bits (93), Expect = 0.023
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +2
Query: 314 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKI 457
LG+ I R+A+ +SQK LA IC +P +++ E G IPN I+L KI
Sbjct: 11 LGQRIALERRAQHLSQKQLAADICSQP-MISQIEKGTYIPNAILLAKI 57
>UniRef50_O26825 Cluster: Conserved protein; n=1;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
Conserved protein - Methanobacterium thermoautotrophicum
Length = 155
Score = 41.5 bits (93), Expect = 0.023
Identities = 22/60 (36%), Positives = 36/60 (60%)
Frame = +2
Query: 311 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKLRGK 490
D G++I R+ + S++DLA +I EK ++N E+ R P+ + K+ER + IKL K
Sbjct: 68 DYGRIIRTEREKRDWSREDLAERINEKVSVINRIESERMEPDIKLARKLERLLKIKLLEK 127
>UniRef50_Q73HP0 Cluster: Transcriptional regulator, putative; n=14;
Wolbachia|Rep: Transcriptional regulator, putative -
Wolbachia pipientis wMel
Length = 312
Score = 40.3 bits (90), Expect = 0.053
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +2
Query: 239 HVTTKNTA-KLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYE 415
HV ++ T+ +D + + IP +G+ I + R +G +Q+DLA+K+ Q + +YE
Sbjct: 144 HVISQTTSLSIDEYDNDEKKISIPYKVGQRIKEWRLRRGYTQEDLASKVGIINQRIYEYE 203
Query: 416 AGRGIPNNIVLGKIERAIGIKL 481
GR + +L +I + + I +
Sbjct: 204 QGRAAVSLEMLNEIAKVLLINI 225
Score = 33.5 bits (73), Expect = 6.1
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 314 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAG 421
+G+ + R AKG +QKDLA KI Q++ YE G
Sbjct: 16 IGQEVRNRRLAKGYTQKDLAKKIDTTYQVILQYEKG 51
>UniRef50_A0LPM5 Cluster: Transcriptional regulator of molybdate
metabolism, XRE family; n=2; Deltaproteobacteria|Rep:
Transcriptional regulator of molybdate metabolism, XRE
family - Syntrophobacter fumaroxidans (strain DSM 10017
/ MPOB)
Length = 374
Score = 40.3 bits (90), Expect = 0.053
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +2
Query: 326 IMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
+ R+A+G+SQ +LA ++ K Q + D E+GR +PN + I R +G ++
Sbjct: 14 LKSARKARGLSQSELAGRVGVKRQAIYDMESGRYLPNTALALYIARELGCRV 65
>UniRef50_Q74N97 Cluster: NEQ143; n=1; Nanoarchaeum equitans|Rep:
NEQ143 - Nanoarchaeum equitans
Length = 148
Score = 40.3 bits (90), Expect = 0.053
Identities = 21/67 (31%), Positives = 39/67 (58%)
Frame = +2
Query: 296 EKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 475
E +P + +LI + R+ KG++Q DLA + ++ E+G P+ + KIE+ +GI
Sbjct: 61 EFVP-NFNELIKKAREEKGLTQSDLAKLLHTDINTISKIESGDYYPSEKLAKKIEKLLGI 119
Query: 476 KLRGKER 496
K+ K++
Sbjct: 120 KIMEKKK 126
>UniRef50_A5N9B0 Cluster: Predicted phage transcriptional regulator;
n=1; Clostridium kluyveri DSM 555|Rep: Predicted phage
transcriptional regulator - Clostridium kluyveri DSM 555
Length = 268
Score = 39.9 bits (89), Expect = 0.070
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +2
Query: 308 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
+++G+ I + R KG++QK+LA I P + +YE R P+ L KI + +G+ +
Sbjct: 1 MNIGENIKRIRTQKGLTQKELAKSIHVTPTTIQNYENNRRKPSVDTLDKIAKVLGVTI 58
>UniRef50_Q980M2 Cluster: Multiprotein Bridging Factor (MBP-like),
putative; n=5; Sulfolobaceae|Rep: Multiprotein Bridging
Factor (MBP-like), putative - Sulfolobus solfataricus
Length = 165
Score = 39.9 bits (89), Expect = 0.070
Identities = 25/78 (32%), Positives = 39/78 (50%)
Frame = +2
Query: 248 TKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRG 427
T+ A L E +I D K+I R+ G+SQ+ LA K+ IV +E+G+
Sbjct: 56 TRKKATLKPPKMENAELEIVTDYYKIIKTAREQLGISQQQLAQKLKVSENIVKRFESGKL 115
Query: 428 IPNNIVLGKIERAIGIKL 481
P ++E+ +GIKL
Sbjct: 116 KPTISQARQLEKILGIKL 133
>UniRef50_Q2FQ48 Cluster: Transcriptional regulator, XRE family;
n=3; Methanomicrobiales|Rep: Transcriptional regulator,
XRE family - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 172
Score = 39.9 bits (89), Expect = 0.070
Identities = 27/99 (27%), Positives = 42/99 (42%)
Frame = +2
Query: 185 QGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQK 364
QG T T+ +T+ + R+ + + D I R GM+QK
Sbjct: 43 QGAVPRTSAAQAVRTSAYSGSTRPQVQRSRDLFDRMGGDLVEDYADRIRDARMKLGMTQK 102
Query: 365 DLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
DLA + E+ +V E G IP + V K+E+ + I L
Sbjct: 103 DLALAMMERELLVKKLEKGELIPEDEVRKKLEKILNISL 141
>UniRef50_A6TTI0 Cluster: Putative transcriptional regulator, XRE
family; n=1; Alkaliphilus metalliredigens QYMF|Rep:
Putative transcriptional regulator, XRE family -
Alkaliphilus metalliredigens QYMF
Length = 89
Score = 39.5 bits (88), Expect = 0.093
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +2
Query: 263 KLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNI 442
++ RE ++L K+ + K I+Q R A+G+SQK+LA K+ K ++ E G P+
Sbjct: 15 EVKREYDDL---KVLYAIKKEIIQLRLAQGLSQKELAEKVGTKQSAISRLEGGEYNPSIE 71
Query: 443 VLGKIERAIG 472
L K+ A+G
Sbjct: 72 FLSKVAHALG 81
>UniRef50_A2BLW5 Cluster: Conserved archaeal protein; n=1;
Hyperthermus butylicus DSM 5456|Rep: Conserved archaeal
protein - Hyperthermus butylicus (strain DSM 5456 / JCM
9403)
Length = 200
Score = 39.5 bits (88), Expect = 0.093
Identities = 20/64 (31%), Positives = 37/64 (57%)
Frame = +2
Query: 290 RHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAI 469
R+E + D + I + RQ G++Q++LA K+ ++ EAG +P + ++ER +
Sbjct: 105 RYEVVE-DYAERIRRARQRLGLTQRELAQKVRVGENVIKRIEAGTLVPPIDLARRLERVL 163
Query: 470 GIKL 481
G+KL
Sbjct: 164 GVKL 167
>UniRef50_A0B6C6 Cluster: Transcriptional regulator, XRE family;
n=1; Methanosaeta thermophila PT|Rep: Transcriptional
regulator, XRE family - Methanosaeta thermophila (strain
DSM 6194 / PT) (Methanothrixthermophila (strain DSM 6194
/ PT))
Length = 165
Score = 39.5 bits (88), Expect = 0.093
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +2
Query: 296 EKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 475
E +P D G +I R++ +S +DLA +I EK ++ E +P + V K+E+ + I
Sbjct: 76 EVVP-DYGNIIKNARESMNLSLEDLALRIKEKASLLRKIEREELVPEDDVRKKLEKELKI 134
Query: 476 KL 481
KL
Sbjct: 135 KL 136
>UniRef50_Q047Y9 Cluster: Transcriptional regulator, xre family;
n=2; Lactobacillus delbrueckii subsp. bulgaricus|Rep:
Transcriptional regulator, xre family - Lactobacillus
delbrueckii subsp. bulgaricus (strain ATCC BAA-365)
Length = 119
Score = 39.1 bits (87), Expect = 0.12
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +2
Query: 314 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 475
+GK + R+ +GMSQ++LA + Q ++++E GR +P + KI G+
Sbjct: 6 IGKYLRDLRRRRGMSQQELALALGVSKQTISNWEVGRKVPRMKAVDKIANIFGV 59
>UniRef50_Q8SWK3 Cluster: Putative uncharacterized protein
ECU01_0955; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU01_0955 - Encephalitozoon
cuniculi
Length = 95
Score = 39.1 bits (87), Expect = 0.12
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 314 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIK 478
+G I R KGMS+KDLA K+ + I++ +E G + N + + E + +K
Sbjct: 37 VGDAIANARAQKGMSRKDLAQKMKKNVSIIDSWERGEAVYNEKIAKEFESILEVK 91
>UniRef50_A5CZG2 Cluster: Hypothetical transcriptional regulator;
n=1; Pelotomaculum thermopropionicum SI|Rep:
Hypothetical transcriptional regulator - Pelotomaculum
thermopropionicum SI
Length = 97
Score = 38.7 bits (86), Expect = 0.16
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = +2
Query: 290 RHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAI 469
R LDL I++ R+ KGM+QKD+A K Q+V+ E+ +PN L KI A+
Sbjct: 29 RQASAELDLIAQIIKTRKEKGMTQKDVADKAGLTQQMVSRIESREHLPNYRNLVKIADAL 88
Query: 470 GIKLR 484
K++
Sbjct: 89 DSKIQ 93
>UniRef50_O28302 Cluster: Putative uncharacterized protein; n=1;
Archaeoglobus fulgidus|Rep: Putative uncharacterized
protein - Archaeoglobus fulgidus
Length = 159
Score = 38.7 bits (86), Expect = 0.16
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 323 LIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKLR 484
+I + R+ +G SQ+ LA KI EK ++ E P V+ K+E+ IKLR
Sbjct: 77 IIRREREKRGWSQEQLAKKIQEKESLIKKIENAEITPEPEVVEKLEKLFNIKLR 130
>UniRef50_Q88UW0 Cluster: Putative uncharacterized protein lp_2342;
n=1; Lactobacillus plantarum|Rep: Putative
uncharacterized protein lp_2342 - Lactobacillus
plantarum
Length = 298
Score = 38.3 bits (85), Expect = 0.21
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +2
Query: 314 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
LG+ + Q R+ KGMSQK+LA IC + I + E IP+ ++ KI +GI+L
Sbjct: 4 LGEKVRQFRKRKGMSQKELADGICTQATI-SLIEKKSKIPSMKIMMKICNRLGIRL 58
>UniRef50_Q0W256 Cluster: Putative transcription factor; n=1;
uncultured methanogenic archaeon RC-I|Rep: Putative
transcription factor - Uncultured methanogenic archaeon
RC-I
Length = 166
Score = 37.9 bits (84), Expect = 0.28
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = +2
Query: 281 EELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIE 460
++++ E + GK I R+A+ M+ ++LA K K I+ E G P + ++ K+E
Sbjct: 69 DKIKDELVEDYAGK-IKSAREARHMTDEELAAKTGTKVNIIRKVERGELAPEDALVKKLE 127
Query: 461 RAIGIKL 481
R + IKL
Sbjct: 128 RELDIKL 134
>UniRef50_O30257 Cluster: Uncharacterized HTH-type transcriptional
regulator AF_2414; n=1; Archaeoglobus fulgidus|Rep:
Uncharacterized HTH-type transcriptional regulator
AF_2414 - Archaeoglobus fulgidus
Length = 229
Score = 37.9 bits (84), Expect = 0.28
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 317 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKLRGK 490
G+ + + R SQ DLA K+ P +++DYE+GR P L K A+ I+L G+
Sbjct: 21 GEALRKWRSIFNASQSDLARKLGISPSVISDYESGRRKPGTAFLKKFVCAL-IELDGE 77
>UniRef50_UPI00015BB0A5 Cluster: transcriptional regulator, XRE
family; n=1; Ignicoccus hospitalis KIN4/I|Rep:
transcriptional regulator, XRE family - Ignicoccus
hospitalis KIN4/I
Length = 157
Score = 37.1 bits (82), Expect = 0.50
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +2
Query: 311 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
D + + + R+ G+S+++L K+ E ++ E GR P+ + K+ER +G++L
Sbjct: 70 DYAERVRKARERLGLSRRELGMKVGEHETVIKRIELGRLEPDLELARKLERVLGVEL 126
>UniRef50_Q3DNV7 Cluster: Transcriptional regulator, Cro/CI family;
n=1; Streptococcus agalactiae 515|Rep: Transcriptional
regulator, Cro/CI family - Streptococcus agalactiae 515
Length = 117
Score = 37.1 bits (82), Expect = 0.50
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 338 RQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 475
R+ KG+SQK+LA KI PQ +++ E +G P L KI R +
Sbjct: 13 RKQKGLSQKELAKKIGMLPQTISNIENQKGYPTFSNLDKIARYFNV 58
>UniRef50_A3H8F8 Cluster: Transcriptional regulator, XRE family;
n=1; Caldivirga maquilingensis IC-167|Rep:
Transcriptional regulator, XRE family - Caldivirga
maquilingensis IC-167
Length = 182
Score = 37.1 bits (82), Expect = 0.50
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +2
Query: 233 KQHVTTKNTAKLDRETEELRHEKIPL--DLGKLIMQGRQAKGMSQKDLATKICEKPQIVN 406
++++T K E + E++ + + G++I R GMS+ LA+ + K +
Sbjct: 63 QRYITPVRQVKRRNEVNVNQAERLEVIDNYGEVIKDARSRLGMSRDVLASMLGIKESTLR 122
Query: 407 DYEAGRGIPNNIVLGKIERAIGIKL 481
+ E G+ IP+ + K+E+ +GIKL
Sbjct: 123 NIEDGKLIPDINLARKMEKVLGIKL 147
>UniRef50_Q9X8B2 Cluster: Putative DNA-binding protein; n=1;
Streptomyces coelicolor|Rep: Putative DNA-binding
protein - Streptomyces coelicolor
Length = 390
Score = 36.7 bits (81), Expect = 0.65
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 317 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 475
G + Q R+ G ++K+LATKI P V YEAG P + ++ A+G+
Sbjct: 19 GARLTQARRLAGWTKKELATKINVTPAAVGQYEAGAIRPRPEQVRRLAEALGM 71
>UniRef50_A6LAD6 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Parabacteroides distasonis (strain ATCC 8503 / DSM 20701
/ NCTC11152)
Length = 120
Score = 36.7 bits (81), Expect = 0.65
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +2
Query: 314 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 475
+ +LI + KGMSQK LA +I P VNDY +GR P + + R + I
Sbjct: 59 VAELIELSLEEKGMSQKQLAGEIGISPSRVNDYISGRSEPTLKIARLLCRVLNI 112
>UniRef50_Q039U4 Cluster: Transcriptional regulator, xre family;
n=1; Lactobacillus casei ATCC 334|Rep: Transcriptional
regulator, xre family - Lactobacillus casei (strain ATCC
334)
Length = 185
Score = 36.3 bits (80), Expect = 0.86
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +2
Query: 317 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIK---LRG 487
G+ + Q R+ KG+SQ DLA I Q ++ YE G P+ + K+ +G+ L G
Sbjct: 3 GERLTQLRKQKGLSQNDLAEAIGISRQAISKYENGLAEPDLDKIAKLRDILGVSYADLLG 62
Query: 488 KE 493
KE
Sbjct: 63 KE 64
>UniRef50_A5KM56 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 429
Score = 36.3 bits (80), Expect = 0.86
Identities = 15/53 (28%), Positives = 35/53 (66%)
Frame = +2
Query: 317 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 475
G+ I + R+ +GM+QK++A + + V+ +E +G+P+ +L ++ +A+G+
Sbjct: 48 GEFIARKRKERGMTQKEMAELLGVTNKAVSKWETSQGMPDIGILPELGKALGV 100
>UniRef50_A3VUS8 Cluster: Putative uncharacterized protein; n=1;
Parvularcula bermudensis HTCC2503|Rep: Putative
uncharacterized protein - Parvularcula bermudensis
HTCC2503
Length = 486
Score = 36.3 bits (80), Expect = 0.86
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 311 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIV-LGKIERAIGIKL 481
+L +++ R A G++Q+DLA ++ KPQ + YEA R ++ L +I +A+G+++
Sbjct: 79 ELADGLIKARIASGLTQQDLAERVGLKPQQIQRYEAERYAGASLTRLIEIVKALGVRI 136
>UniRef50_A0Q3S9 Cluster: Transcriptional regulator, MerR family;
n=1; Clostridium novyi NT|Rep: Transcriptional
regulator, MerR family - Clostridium novyi (strain NT)
Length = 147
Score = 36.3 bits (80), Expect = 0.86
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +2
Query: 308 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 475
+++G+ I + R+ KG++Q +LA K + YE G P VL KI A+GI
Sbjct: 1 MNVGENIRKYRKEKGLTQSELAEKTHLATNTIQRYEKGHRQPTMQVLEKIADALGI 56
>UniRef50_Q3ER79 Cluster: Transcriptional regulator; n=2; Bacillus
cereus group|Rep: Transcriptional regulator - Bacillus
thuringiensis serovar israelensis ATCC 35646
Length = 143
Score = 35.9 bits (79), Expect = 1.1
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 317 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
G + + R+ KG SQ+ LATKI Q V+ +E G+ PN V+ + GI +
Sbjct: 4 GDKLKKEREKKGWSQEYLATKIHVSRQSVSKWETGKNYPNIGVIIDLSDLFGITI 58
>UniRef50_A6TK93 Cluster: Plasmid maintenance system antidote
protein, XRE family; n=1; Alkaliphilus metalliredigens
QYMF|Rep: Plasmid maintenance system antidote protein,
XRE family - Alkaliphilus metalliredigens QYMF
Length = 254
Score = 35.9 bits (79), Expect = 1.1
Identities = 21/81 (25%), Positives = 42/81 (51%)
Frame = +2
Query: 233 KQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDY 412
+Q + ++ A + E++ I ++GK I R+ M + LA I KPQ + DY
Sbjct: 88 EQDLVAESEASYFHQVEDIVRYNI--EIGKNITHVREDAKMDVEQLAAAINIKPQALKDY 145
Query: 413 EAGRGIPNNIVLGKIERAIGI 475
E+G+ + + V+ +I + + +
Sbjct: 146 ESGKKVIPSYVIHRICKELSV 166
>UniRef50_A6NZM6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 296
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +2
Query: 314 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
+ K I R+AKGMSQ+++A K+ Q V+ +E G +P+ VL ++ + + +
Sbjct: 4 IDKNIKHFRKAKGMSQEEMAVKLNVVRQTVSKWENGLSVPDADVLIRMAELLNVSV 59
>UniRef50_Q2Y8T7 Cluster: Transcriptional regulator, XRE family;
n=1; Nitrosospira multiformis ATCC 25196|Rep:
Transcriptional regulator, XRE family - Nitrosospira
multiformis (strain ATCC 25196 / NCIMB 11849)
Length = 189
Score = 35.5 bits (78), Expect = 1.5
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 308 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAI 469
+D+ ++I +GR+ ++Q +LA + PQ V +E+G P L KI +
Sbjct: 6 MDIARIIREGREKLKLNQSELAELVGVSPQAVQQWESGATQPRGKRLNKIAEVL 59
>UniRef50_Q4UUY9 Cluster: Transcriptional regulator, HTH_3 family;
n=3; Proteobacteria|Rep: Transcriptional regulator,
HTH_3 family - Xanthomonas campestris pv. campestris
(strain 8004)
Length = 412
Score = 35.1 bits (77), Expect = 2.0
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +2
Query: 278 TEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKI 457
T +H I + + R+ +GM +++LA KI + V++YEAG P + L K+
Sbjct: 14 TSSEKHNGIVMFNPLRLTLARKRRGMKKRELAEKIGLTEKSVSNYEAGSQEPESTTLSKL 73
Query: 458 ERAI 469
A+
Sbjct: 74 SEAL 77
>UniRef50_Q03IY6 Cluster: Transcriptional regulator, xre family;
n=8; Streptococcus|Rep: Transcriptional regulator, xre
family - Streptococcus thermophilus (strain ATCC BAA-491
/ LMD-9)
Length = 289
Score = 35.1 bits (77), Expect = 2.0
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +2
Query: 314 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
L I R+ MSQK+LA IC++ QI + E G IP +++L ++ R + + +
Sbjct: 5 LASRIKNRRKELKMSQKELAEGICKQGQI-SRLENGEYIPGSVLLHELSRKLNVSM 59
>UniRef50_A7HQ26 Cluster: Helix-turn-helix domain protein; n=1;
Parvibaculum lavamentivorans DS-1|Rep: Helix-turn-helix
domain protein - Parvibaculum lavamentivorans DS-1
Length = 422
Score = 35.1 bits (77), Expect = 2.0
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 260 AKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNN 439
AK D + +R +K D G ++ R A+G++Q+DLA ++ K Q V YEA R +
Sbjct: 68 AKDDGNYKNMR-QKAGGDPGLALIVARIARGLTQRDLAWRLGLKEQQVQRYEADRYSTIS 126
Query: 440 IV-LGKIERAIGIKLR 484
+ KI +G++LR
Sbjct: 127 LKNYTKIALLLGVQLR 142
>UniRef50_A7HLN1 Cluster: Diguanylate cyclase; n=1; Fervidobacterium
nodosum Rt17-B1|Rep: Diguanylate cyclase -
Fervidobacterium nodosum Rt17-B1
Length = 778
Score = 35.1 bits (77), Expect = 2.0
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -3
Query: 147 AEAFGGFLRRIVTVSQSDMFNVDHWYDKTKQ 55
A F GF +++++S++++ + HWYD+ K+
Sbjct: 40 ANKFDGFYEKLLSISRNELTELSHWYDENKE 70
>UniRef50_A6P2G2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 297
Score = 35.1 bits (77), Expect = 2.0
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +2
Query: 317 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIG 472
G+LI R+ KGM+QK+LA K+ + V+ +E G P +L + A+G
Sbjct: 7 GQLIRDLRKEKGMTQKELADKLHITDRAVSKWERGLCAPEISLLEPLAEALG 58
>UniRef50_A6G6R0 Cluster: Transcriptional regulator; n=2;
Plesiocystis pacifica SIR-1|Rep: Transcriptional
regulator - Plesiocystis pacifica SIR-1
Length = 113
Score = 35.1 bits (77), Expect = 2.0
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +2
Query: 284 ELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIER 463
EL HE +LG + + R+ G+SQ+ LA K + + E G G P+ + K+
Sbjct: 11 ELTHE----ELGDRVRERRRELGLSQEKLAEKAQVSKETIGRLEQGGGTPSLFTVRKVAN 66
Query: 464 AIG 472
A+G
Sbjct: 67 ALG 69
>UniRef50_A0CWQ6 Cluster: Chromosome undetermined scaffold_3, whole
genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_3, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1353
Score = 35.1 bits (77), Expect = 2.0
Identities = 23/91 (25%), Positives = 40/91 (43%)
Frame = +2
Query: 125 KKPPKASALKTEQAVNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKI 304
+KP K+ + T+Q + + Q+K + KQH + N K ++E ++
Sbjct: 808 EKPEKSFSQHTKQDTQQQSQSNSKQNQQKKQVSSQEKQHYSNSNIQKQEKERTNEKNSSN 867
Query: 305 PLDLGKLIMQGRQAKGMSQKDLATKICEKPQ 397
L+ G+ Q Q + QKD I + PQ
Sbjct: 868 DLNQGE---QQLQVQNKEQKDQNYSINQNPQ 895
>UniRef50_UPI000045E701 Cluster: COG1396: Predicted transcriptional
regulators; n=1; Rickettsia rickettsii|Rep: COG1396:
Predicted transcriptional regulators - Rickettsia
rickettsii
Length = 92
Score = 34.7 bits (76), Expect = 2.6
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 299 KIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIK 478
K+ ++ +++ R A M+Q D+A K+ + E+G IPN + L K +A+ K
Sbjct: 25 KMEFEIASTLIKVRLASNMTQADVAKKMSNSQAQIARMESGHHIPNFLSLQKYTKAVNQK 84
Query: 479 L 481
+
Sbjct: 85 I 85
>UniRef50_Q81S88 Cluster: DNA-binding protein; n=15; Bacillus|Rep:
DNA-binding protein - Bacillus anthracis
Length = 181
Score = 34.7 bits (76), Expect = 2.6
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 308 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 475
+D+GK I Q R+ KG++ K+LA P +++ E G P+ L + +A+ +
Sbjct: 4 IDIGKKIEQQRKEKGLTSKELAKMADITPSMLSQIERGSANPSIQTLKVLAKALDV 59
>UniRef50_Q392E3 Cluster: Transcriptional regulator, XRE family;
n=4; Burkholderia|Rep: Transcriptional regulator, XRE
family - Burkholderia sp. (strain 383) (Burkholderia
cepacia (strain ATCC 17760/ NCIB 9086 / R18194))
Length = 281
Score = 34.7 bits (76), Expect = 2.6
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +2
Query: 305 PLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKLR 484
P +LG+L+ R +G+SQ DL+ + ++ E+GR +P L + + + + LR
Sbjct: 12 PHELGQLLRYWRDVRGVSQLDLSLDAGISQRQISFIESGRSVPGRDTLLTLAQTLDVPLR 71
>UniRef50_Q2RSF5 Cluster: Transcriptional Regulator, XRE family;
n=1; Rhodospirillum rubrum ATCC 11170|Rep:
Transcriptional Regulator, XRE family - Rhodospirillum
rubrum (strain ATCC 11170 / NCIB 8255)
Length = 196
Score = 34.7 bits (76), Expect = 2.6
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +2
Query: 308 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIK--- 478
+++GK I + R+ +GMSQ LA + + YE GR P ++ + R + +
Sbjct: 2 IEIGKRIAEARKDQGMSQYALAKLLGVNQSTIAYYERGRNTPKPWIVEDLARILNVSAAF 61
Query: 479 -LRGKER 496
L G+ER
Sbjct: 62 LLYGRER 68
>UniRef50_O53463 Cluster: POSSIBLE TRANSCRIPTIONAL REGULATORY
PROTEIN; n=8; Mycobacterium tuberculosis complex|Rep:
POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN -
Mycobacterium tuberculosis
Length = 346
Score = 34.7 bits (76), Expect = 2.6
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +2
Query: 314 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 475
LG ++ R+A+G++Q +LA + +N YE+G P+ ++ K+ +G+
Sbjct: 4 LGDVLAVARKARGLTQIELAELVGLTQPAINRYESGDRDPDQHIVAKLAEILGV 57
>UniRef50_Q41GJ6 Cluster: Helix-turn-helix motif; n=1;
Exiguobacterium sibiricum 255-15|Rep: Helix-turn-helix
motif - Exiguobacterium sibiricum 255-15
Length = 139
Score = 34.7 bits (76), Expect = 2.6
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +2
Query: 314 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAI 469
LGK IMQ R+ +QK LA + E ++ YE G+ +PN L ++ A+
Sbjct: 5 LGKKIMQLRKQHQYTQKHLAERCGETVTSISAYERGQRMPNTQTLERLALAL 56
>UniRef50_Q085U7 Cluster: Putative uncharacterized protein; n=1;
Shewanella frigidimarina NCIMB 400|Rep: Putative
uncharacterized protein - Shewanella frigidimarina
(strain NCIMB 400)
Length = 325
Score = 34.7 bits (76), Expect = 2.6
Identities = 15/51 (29%), Positives = 33/51 (64%)
Frame = +2
Query: 263 KLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYE 415
+++++ E+ K + G ++ R+AKG+S + +AT++ +P+I+ND E
Sbjct: 6 EVEQDAEKAPLLKDVVTAGAILKAAREAKGLSLETVATQLHLRPKIINDLE 56
>UniRef50_A7B1X5 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 387
Score = 34.7 bits (76), Expect = 2.6
Identities = 18/76 (23%), Positives = 38/76 (50%)
Frame = +2
Query: 254 NTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIP 433
+T K ++ + R + L +GK I R+ KG++Q+ +A + V+ +E P
Sbjct: 8 DTIKAAKDQRKERCRWMELKIGKRIQDLRKQKGLTQEQVAAALNISAAAVSKWETDTTYP 67
Query: 434 NNIVLGKIERAIGIKL 481
+ +L + R +G+ +
Sbjct: 68 DITILNPLARLLGVSV 83
>UniRef50_A5I039 Cluster: DNA-binding protein; n=6; Clostridium|Rep:
DNA-binding protein - Clostridium botulinum A str. ATCC
3502
Length = 373
Score = 34.7 bits (76), Expect = 2.6
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 308 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
L++GK I+ R+ KG++Q+ LA I V+ +E+G P+ ++L ++ I +
Sbjct: 4 LNIGKCIIHKRKEKGITQEQLANYIGVSKASVSKWESGSSYPDIVLLPELATYFNISV 61
>UniRef50_A0V350 Cluster: Plasmid maintenance system antidote
protein, XRE family; n=2; Clostridium|Rep: Plasmid
maintenance system antidote protein, XRE family -
Clostridium cellulolyticum H10
Length = 233
Score = 34.7 bits (76), Expect = 2.6
Identities = 17/56 (30%), Positives = 34/56 (60%)
Frame = +2
Query: 314 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
+G+ I + R KGM+ K LA + + V D E+G+ I ++ ++G++ +A+ +L
Sbjct: 7 IGQEINKLRLKKGMTPKQLARALGVSEKFVLDIESGKKIVSDDMIGRVSKALDFEL 62
>UniRef50_Q8ZYG8 Cluster: Conserved helix-turn-helix protein; n=4;
Pyrobaculum|Rep: Conserved helix-turn-helix protein -
Pyrobaculum aerophilum
Length = 161
Score = 34.7 bits (76), Expect = 2.6
Identities = 17/53 (32%), Positives = 33/53 (62%)
Frame = +2
Query: 323 LIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
+I + R+ G+S++ LA + K ++ EAG+ P+ + K+E+A+GI+L
Sbjct: 75 IIKRARENLGLSRETLAAMLGVKETVLRRIEAGQLQPDFSLAKKLEKALGIRL 127
>UniRef50_Q5DUQ9 Cluster: Putative uncharacterized protein; n=1;
Bacillus mycoides|Rep: Putative uncharacterized protein
- Bacillus mycoides
Length = 240
Score = 34.3 bits (75), Expect = 3.5
Identities = 13/43 (30%), Positives = 28/43 (65%)
Frame = +2
Query: 308 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPN 436
+D+GK I R M+Q+D+A+++ Q+++ +E G+ +P+
Sbjct: 20 MDIGKKIKHLRLINNMTQEDVASQLFISRQVISKWELGKSLPD 62
>UniRef50_Q1FJM3 Cluster: Helix-turn-helix motif; n=1; Clostridium
phytofermentans ISDg|Rep: Helix-turn-helix motif -
Clostridium phytofermentans ISDg
Length = 163
Score = 34.3 bits (75), Expect = 3.5
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +2
Query: 314 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 475
+GK I R+ +G++Q+ LA + + ++ +E G+G+P+ L + +GI
Sbjct: 6 IGKFIADRRKVRGLTQQQLADDLGLTNKAISKWETGQGMPDITTLPILAEMLGI 59
>UniRef50_A6CG08 Cluster: Transcriptional regulator, XRE family
protein; n=1; Planctomyces maris DSM 8797|Rep:
Transcriptional regulator, XRE family protein -
Planctomyces maris DSM 8797
Length = 160
Score = 34.3 bits (75), Expect = 3.5
Identities = 26/83 (31%), Positives = 42/83 (50%)
Frame = +2
Query: 236 QHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYE 415
Q T + LD E E +K +GK I + R+A MSQ+ L+ K ++ E
Sbjct: 73 QEPITVSRLDLDHEPGE-EIQKWMNFVGKKIHRYRKAAKMSQEVLSEKTGLPQSHISRLE 131
Query: 416 AGRGIPNNIVLGKIERAIGIKLR 484
+G+ P+N L KI A+ I+++
Sbjct: 132 SGKHSPSNATLKKIAAALDIEIK 154
>UniRef50_A5TRU5 Cluster: MerR family transcriptional regulator;
n=3; Fusobacterium nucleatum|Rep: MerR family
transcriptional regulator - Fusobacterium nucleatum
subsp. polymorphum ATCC 10953
Length = 184
Score = 34.3 bits (75), Expect = 3.5
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = +2
Query: 308 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
+ +G+ + + R KGMS ++LATK+ ++ E G+ P+ L KI + +++
Sbjct: 1 MTIGEKLKKSRNDKGMSLRELATKVELSASFLSQIEQGKASPSIENLKKIAHTLDVRV 58
>UniRef50_A5N1F8 Cluster: Predicted transcriptional regulator; n=1;
Clostridium kluyveri DSM 555|Rep: Predicted
transcriptional regulator - Clostridium kluyveri DSM 555
Length = 162
Score = 34.3 bits (75), Expect = 3.5
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +2
Query: 308 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIK 478
+ +G+ I R+ ++Q+ LA KI + ++V YE+ P+ +L KIE A+ IK
Sbjct: 1 MTIGESIKYYRKNNKLTQETLANKINKSLRMVQKYESDEVTPSIEILNKIEDALCIK 57
>UniRef50_A3I0P0 Cluster: Putative uncharacterized protein; n=1;
Algoriphagus sp. PR1|Rep: Putative uncharacterized
protein - Algoriphagus sp. PR1
Length = 289
Score = 34.3 bits (75), Expect = 3.5
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 311 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIK 478
+LGK I + R+AKG++Q++L + + EAG P + + + A+GI+
Sbjct: 33 ELGKKISEMRKAKGLTQEELVEMCNLNVRTIQRIEAGEVTPRSYTVKTLFEALGIR 88
>UniRef50_A1BF09 Cluster: Helix-turn-helix domain protein; n=2;
Chlorobium|Rep: Helix-turn-helix domain protein -
Chlorobium phaeobacteroides (strain DSM 266)
Length = 155
Score = 34.3 bits (75), Expect = 3.5
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +2
Query: 326 IMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
I++ +AK +SQK+LA KI PQ VN GR + K+E A+ I L
Sbjct: 45 ILRTLRAKNVSQKELAEKIGVSPQQVNKIVKGRENLTLETISKLEGALDIVL 96
>UniRef50_A0YJB7 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 92
Score = 34.3 bits (75), Expect = 3.5
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = +2
Query: 323 LIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAI 469
LI+ R+ G+SQ+ LAT++ Q VN +E GR P+++ L I++ +
Sbjct: 15 LILTLRKRLGLSQEKLATQLGVSFQTVNRWERGRTQPSHLALQAIKQKL 63
>UniRef50_Q00US1 Cluster: Chromosome 15 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 15 contig 1, DNA
sequence - Ostreococcus tauri
Length = 255
Score = 34.3 bits (75), Expect = 3.5
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = -3
Query: 477 FIPIALSIFPRTMLFGMPRPAS*SFTICGFSQILVARSF*LIPLACLPCIISF 319
F P S P+ FG+ P S S TICGFS I A + A PC ++F
Sbjct: 28 FTPRMRSSLPKICWFGIALPDSYSCTICGFSLICCASCACVSFFARRPCRMAF 80
>UniRef50_Q5DE94 Cluster: SJCHGC08847 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08847 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 34.3 bits (75), Expect = 3.5
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = +3
Query: 567 FIYC-IIKIHLILAVACTLINWL*NMM*AFILFCLEISV--RLMLPPLKMNCKL 719
F +C ++ I+L +C LI W+ ++ ++ FCLEI++ RL L + C+L
Sbjct: 40 FFFCFLLTINLCTKHSCKLIKWIRSICIDYLFFCLEINIMSRLFLFDKLLLCQL 93
>UniRef50_Q8Y3P3 Cluster: Lmo2792 protein; n=13; Listeria|Rep:
Lmo2792 protein - Listeria monocytogenes
Length = 252
Score = 33.9 bits (74), Expect = 4.6
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +2
Query: 236 QHVTTKNTAKLDRETEELRH--EKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVND 409
Q T KN A E E + H E LGK I R K SQ DLA K P I+
Sbjct: 167 QFETLKNKAL---ENEGIAHYLESFSASLGKYIFSKRMEKKWSQLDLALKSDLSPVIIGR 223
Query: 410 YEAGRGIPNNIVLGKIERAIGIK 478
EAG + K+ +G+K
Sbjct: 224 LEAGDPDLTLRMYQKVCTVLGVK 246
>UniRef50_Q2B6Z1 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. NRRL B-14911|Rep: Putative uncharacterized
protein - Bacillus sp. NRRL B-14911
Length = 299
Score = 33.9 bits (74), Expect = 4.6
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +2
Query: 311 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
+LGK I R ++G+ Q +L+ IC + QI + E G IP + L I R +G+ +
Sbjct: 7 NLGKKIKDLRVSRGLKQSELSEGICTQAQI-SKIERGDIIPLSSTLYLIARRLGVDI 62
>UniRef50_Q18XJ5 Cluster: Transcriptional regulator, XRE family;
n=2; Desulfitobacterium hafniense|Rep: Transcriptional
regulator, XRE family - Desulfitobacterium hafniense
(strain DCB-2)
Length = 361
Score = 33.9 bits (74), Expect = 4.6
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 308 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAI 469
LD+GK+I R+ K +Q+ LA + V+ +E G P+ +L I RA+
Sbjct: 3 LDMGKVITAKRKEKSWTQEQLAQAVGVSTPAVSKWETGATYPDITLLPPIARAL 56
>UniRef50_Q03I41 Cluster: Transcriptional regulator, xre family;
n=1; Pediococcus pentosaceus ATCC 25745|Rep:
Transcriptional regulator, xre family - Pediococcus
pentosaceus (strain ATCC 25745 / 183-1w)
Length = 190
Score = 33.9 bits (74), Expect = 4.6
Identities = 14/58 (24%), Positives = 34/58 (58%)
Frame = +2
Query: 308 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
+ +G + + RQA+ ++Q+++AT++ Q ++ +E G+ +PN L + + + L
Sbjct: 1 MSIGTTLQKIRQARDLTQQEVATQMYVTRQTISRWEQGKTMPNIYALKDLAQLYNVSL 58
>UniRef50_Q02WQ6 Cluster: Transcriptional regulator, xre family;
n=2; Lactococcus lactis subsp. cremoris|Rep:
Transcriptional regulator, xre family - Lactococcus
lactis subsp. cremoris (strain SK11)
Length = 175
Score = 33.9 bits (74), Expect = 4.6
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 314 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
+G I + R+ K ++Q+ LA + K +++YE G IP L ++ A+G+ +
Sbjct: 10 VGMKIKEFRKNKKLTQQGLADLVGVKNSAISNYEQGTRIPKRDFLFRVANALGVSI 65
>UniRef50_A6GA55 Cluster: Transcriptional regulator, XRE family
protein; n=1; Plesiocystis pacifica SIR-1|Rep:
Transcriptional regulator, XRE family protein -
Plesiocystis pacifica SIR-1
Length = 266
Score = 33.9 bits (74), Expect = 4.6
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 317 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKLR 484
G+ + R+ +G+SQ DLA + P+ ++ E GR P ++ ++ A+ + LR
Sbjct: 10 GERLRAWRKRRGLSQMDLAIEADSTPRYISFIETGRSRPGRELVLRLVEALQLSLR 65
>UniRef50_Q7QPV1 Cluster: GLP_433_12991_13314; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_433_12991_13314 - Giardia lamblia
ATCC 50803
Length = 107
Score = 33.9 bits (74), Expect = 4.6
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = +2
Query: 227 TNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVN 406
TN + T D + I ++ + + + R AKGM++K LA K +
Sbjct: 16 TNNANKKPAGTYDKDPGDNAFGPKAIEFEVRRNLERARAAKGMNRKQLADAAYIKESQLA 75
Query: 407 DYEAGRGIPNNIVLGKIERAIGIKL 481
+E+G + V+ K+E+ +G KL
Sbjct: 76 AWESGSAPIPDAVIPKLEKVLGTKL 100
>UniRef50_Q5QYA8 Cluster: Predicted transcriptional regulator,
contains N-terminal xre-type HTH domain; n=1; Idiomarina
loihiensis|Rep: Predicted transcriptional regulator,
contains N-terminal xre-type HTH domain - Idiomarina
loihiensis
Length = 365
Score = 33.5 bits (73), Expect = 6.1
Identities = 15/61 (24%), Positives = 36/61 (59%)
Frame = +2
Query: 236 QHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYE 415
++ +T++ K + E + +K G+++ + R+AKG+ Q+++A ++ + QI+ E
Sbjct: 4 ENESTQDNKKPESEAAQETEQKPSKGPGEILREAREAKGLEQREVADQLRLRKQIIELLE 63
Query: 416 A 418
A
Sbjct: 64 A 64
>UniRef50_Q2RLW5 Cluster: Transcriptional regulator, XRE family;
n=1; Moorella thermoacetica ATCC 39073|Rep:
Transcriptional regulator, XRE family - Moorella
thermoacetica (strain ATCC 39073)
Length = 115
Score = 33.5 bits (73), Expect = 6.1
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 308 LDLGKLIMQGRQAKGMSQKDLATKI-CEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
L G+ + + RQ KG+ Q+D+A + E+P + N +E G P L ++ R G+ L
Sbjct: 2 LRFGESLKELRQRKGLRQEDVARMVGVERPTVAN-WERGTKQPGLETLVRLSRLFGVSL 59
>UniRef50_O69902 Cluster: Putative transcriptional regulator; n=1;
Streptomyces coelicolor|Rep: Putative transcriptional
regulator - Streptomyces coelicolor
Length = 63
Score = 33.5 bits (73), Expect = 6.1
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 317 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
G+ + + R +GMSQ +A ++ V+ +E GR PN + + + RA+G +L
Sbjct: 4 GRKLKEARNKRGMSQAAVAARMGLSGLYVSYWENGRYAPNGVNMVLLLRALGCEL 58
>UniRef50_Q3Y0J1 Cluster: Helix-turn-helix motif; n=1; Enterococcus
faecium DO|Rep: Helix-turn-helix motif - Enterococcus
faecium DO
Length = 111
Score = 33.5 bits (73), Expect = 6.1
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 320 KLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIG 472
K+I + R+A G +QK+LA KI Q V +E PN L + RA+G
Sbjct: 8 KVIREKRKALGWTQKELAKKIFSTQQAVARWENSVTEPNLDSLTALSRALG 58
>UniRef50_Q212H0 Cluster: Transcriptional regulator, XRE family;
n=2; Alphaproteobacteria|Rep: Transcriptional regulator,
XRE family - Rhodopseudomonas palustris (strain BisB18)
Length = 98
Score = 33.5 bits (73), Expect = 6.1
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 326 IMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKLR 484
I + R+ G+SQ +LA ++ V E+GRG P+ L + +A G KL+
Sbjct: 34 IAKARRRAGLSQAELARRMNTTQSTVARLESGRGQPSTRTLLRFAKATGHKLK 86
>UniRef50_Q11WW9 Cluster: Transcriptional regulator; n=2;
Bacteroidetes|Rep: Transcriptional regulator - Cytophaga
hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 79
Score = 33.5 bits (73), Expect = 6.1
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 296 EKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 475
+++ +G +++ R+ KG SQ DLA + Q + E+G+ P L +I A+G+
Sbjct: 12 QEVQKRIGLRVIELREHKGWSQSDLARACNKDRQAIEKIESGKVNPTIFSLYEIAIALGV 71
Query: 476 KL 481
L
Sbjct: 72 SL 73
>UniRef50_Q08UC5 Cluster: Putative transcriptional repressor; n=2;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
transcriptional repressor - Stigmatella aurantiaca
DW4/3-1
Length = 172
Score = 33.5 bits (73), Expect = 6.1
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 284 ELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPN 436
E+R ++P+ L + Q R+ GM+Q + A I P++ E G +P+
Sbjct: 47 EIRQRRLPVTLSAALKQARKRAGMTQAEAAEGIGIAPEVYGRMERGGVLPS 97
>UniRef50_A7FXB8 Cluster: DNA-binding protein; n=2; Clostridium
botulinum A|Rep: DNA-binding protein - Clostridium
botulinum (strain ATCC 19397 / Type A)
Length = 183
Score = 33.5 bits (73), Expect = 6.1
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +2
Query: 311 DLGKLIMQGRQAKG------MSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIG 472
DLGKLI + R+ K +QK LA +I + + D E GR P+ L I RA
Sbjct: 6 DLGKLIKKAREYKSKKTYKLFTQKMLADEIGKSRSYICDIERGRTYPSFATLSAIARACD 65
Query: 473 IKL 481
+ L
Sbjct: 66 VPL 68
>UniRef50_A6DY12 Cluster: Putative uncharacterized protein; n=1;
Roseovarius sp. TM1035|Rep: Putative uncharacterized
protein - Roseovarius sp. TM1035
Length = 157
Score = 33.5 bits (73), Expect = 6.1
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +2
Query: 311 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIK 478
D G+ + + R + +SQ++L+ I + D EAGR P+ L +++ G++
Sbjct: 5 DFGQSLREWRVTQKLSQRELSAAIGVSRGYIGDIEAGRSEPSRNFLERLQERFGLR 60
>UniRef50_A4NX31 Cluster: Putative uncharacterized protein; n=1;
Haemophilus influenzae 22.4-21|Rep: Putative
uncharacterized protein - Haemophilus influenzae 22.4-21
Length = 178
Score = 33.5 bits (73), Expect = 6.1
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -2
Query: 481 KFYSNCPFNFSKNNVIWNATTSFIIIYNLWFFTNFSGEVFLTHSFSLSALHYKFP 317
KFY N + K ++W+ +T +I +N+W F N +F++ YKFP
Sbjct: 57 KFYINT--SIEKGKMMWSLSTDWISAFNIWLFNN-------NIAFNVDGTIYKFP 102
>UniRef50_A3I6C0 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 182
Score = 33.5 bits (73), Expect = 6.1
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 308 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
L++G I Q R+ MSQ DLA++I ++ E G+ P+ + L KI + +
Sbjct: 4 LEVGVKIKQMRKKNKMSQDDLASQINLTKSHISKIENGKATPSLVTLSKIAEIFDVPM 61
>UniRef50_Q54K09 Cluster: G-protein-coupled receptor (GPCR) family
protein; n=1; Dictyostelium discoideum AX4|Rep:
G-protein-coupled receptor (GPCR) family protein -
Dictyostelium discoideum AX4
Length = 1095
Score = 33.5 bits (73), Expect = 6.1
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2
Query: 451 SKNNVIWNATTSFIIIYNLWFFTNFSGEVFLTHS 350
SK NVIW + + I++YN F+ N S +V HS
Sbjct: 380 SKGNVIWCTSNAIIVVYNTTFY-NVSSKVINIHS 412
>UniRef50_Q298V3 Cluster: GA13041-PA; n=1; Drosophila
pseudoobscura|Rep: GA13041-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 2377
Score = 33.5 bits (73), Expect = 6.1
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 122 RKKPPKASALKTEQAVNAARRQGIPVDTQQKYGAGTNKQHVT-TKNTAKLDRETE-ELRH 295
RK PK + + E +A + P+D KY K HVT T LD+ T+ LR+
Sbjct: 737 RKGQPKITDFEMEMEQDAEATEEQPIDYSAKYSENATKPHVTSTYQETDLDQPTDFSLRY 796
Query: 296 EKIPLDLGKL 325
+ L+ L
Sbjct: 797 AENQLEADHL 806
>UniRef50_A3H5L3 Cluster: Transcriptional regulator, XRE family;
n=1; Caldivirga maquilingensis IC-167|Rep:
Transcriptional regulator, XRE family - Caldivirga
maquilingensis IC-167
Length = 243
Score = 33.5 bits (73), Expect = 6.1
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 317 GKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAG-RGIPNNIVLGKIERAI 469
GK + + R+ + Q +LA K+ P +++DYE+G R P + + K +A+
Sbjct: 28 GKELKRWREYFNIPQTELAIKLSTTPSVISDYESGRRKSPGSYFIKKFVKAL 79
>UniRef50_A2SSN6 Cluster: Helix-turn-helix domain protein; n=1;
Methanocorpusculum labreanum Z|Rep: Helix-turn-helix
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 177
Score = 33.5 bits (73), Expect = 6.1
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 311 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
D + I R AKG +QKDLA + + + +E G P K+E+ +GI L
Sbjct: 92 DYPQRIASARLAKGYTQKDLAFILKMQEGDIKKFERGERAPTEAERKKLEKELGIVL 148
>UniRef50_Q81TU5 Cluster: DNA-binding protein; n=14; Bacillus cereus
group|Rep: DNA-binding protein - Bacillus anthracis
Length = 294
Score = 33.1 bits (72), Expect = 8.1
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 311 DLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGI 475
DLG I + R K +SQ +L IC + QI + E G P++I+L ++ +GI
Sbjct: 5 DLGITIKELRIKKNISQSELCHGICSQSQI-SKIEKGVIYPSSILLYQLSERLGI 58
>UniRef50_Q733K6 Cluster: Helix-turn-helix domain protein; n=6;
Bacillaceae|Rep: Helix-turn-helix domain protein -
Bacillus cereus (strain ATCC 10987)
Length = 262
Score = 33.1 bits (72), Expect = 8.1
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +2
Query: 308 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNN---IVLGKI 457
+ G+ + + R+ KG+SQ+ LA K+ Q V+ +E G+G P I++G +
Sbjct: 1 MGFGEKLFKLRKEKGLSQEALAEKLNTTRQAVSKWENGQGFPETEKLIMIGNV 53
>UniRef50_Q0HYT8 Cluster: Transcriptional regulator, XRE family;
n=1; Shewanella sp. MR-7|Rep: Transcriptional regulator,
XRE family - Shewanella sp. (strain MR-7)
Length = 96
Score = 33.1 bits (72), Expect = 8.1
Identities = 17/55 (30%), Positives = 33/55 (60%)
Frame = +2
Query: 308 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIG 472
L++G+ I+ R+ +GM+Q DLA ++ P+ ++ E G + ++ L I A+G
Sbjct: 6 LEIGQWIVDQRKKRGMTQLDLAEEVGVSPRTLSKIENGYDMKMSLFLA-ITEAVG 59
>UniRef50_A3Y8G1 Cluster: Transcriptional regulator, putative; n=1;
Marinomonas sp. MED121|Rep: Transcriptional regulator,
putative - Marinomonas sp. MED121
Length = 184
Score = 33.1 bits (72), Expect = 8.1
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +2
Query: 308 LDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIERAIGIKL 481
+D+G+ ++ R+ KG+SQ+DLA + ++ E R P+ L KI +G+ L
Sbjct: 1 MDIGERLLTIRRNKGLSQRDLAKRAGVTNSAISMIETNRVSPSVSSLEKILAGMGMSL 58
>UniRef50_A0NKA2 Cluster: Transcriptional regulator,
helix-turn-helix XRE-family; n=1; Oenococcus oeni ATCC
BAA-1163|Rep: Transcriptional regulator,
helix-turn-helix XRE-family - Oenococcus oeni ATCC
BAA-1163
Length = 143
Score = 33.1 bits (72), Expect = 8.1
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 314 LGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGKIER 463
+G+ + + RQ G+SQ+ +A K+ Q V+ +E R IP+ L K+ +
Sbjct: 3 IGQKLQEQRQRNGLSQQQVAQKLNVTRQTVSSWEKDRTIPDPNSLKKLSK 52
>UniRef50_P36617 Cluster: DNA repair protein rad16; n=1;
Schizosaccharomyces pombe|Rep: DNA repair protein rad16
- Schizosaccharomyces pombe (Fission yeast)
Length = 892
Score = 33.1 bits (72), Expect = 8.1
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 119 LRKKPPKASALKTEQAVNAARRQGIPVDTQQKYGAGTN-KQHVTTKNTAKLDRETEELRH 295
+ K K K +A N R+G+P +++ G N T+ NT D + +LR
Sbjct: 439 MSKSIKKPEPSKEREASNTTSRKGVPPSKRRRVRGGNNATSRTTSDNTDANDSFSRDLRL 498
Query: 296 EKIPL 310
EKI L
Sbjct: 499 EKILL 503
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,493,460
Number of Sequences: 1657284
Number of extensions: 13807812
Number of successful extensions: 36887
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 35587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36859
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66262109095
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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