Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_O02
(782 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g42680.1 68415.m05283 ethylene-responsive transcriptional coa... 138 3e-33
At3g58680.1 68416.m06540 ethylene-responsive transcriptional coa... 137 9e-33
At3g24500.1 68416.m03073 ethylene-responsive transcriptional coa... 112 2e-25
At1g67220.1 68414.m07651 zinc finger protein-related similar to ... 31 1.1
At2g21890.1 68415.m02601 mannitol dehydrogenase, putative simila... 30 2.0
At2g21490.1 68415.m02557 dehydrin family protein contains Pfam d... 29 4.6
At5g51500.1 68418.m06387 pectinesterase family protein contains ... 28 8.0
At5g11530.1 68418.m01345 embryonic flower 1 (EMF1) identical to ... 28 8.0
At4g32695.1 68417.m04654 hypothetical protein hypothetical prote... 28 8.0
At4g09980.1 68417.m01634 methyltransferase MT-A70 family protein... 28 8.0
>At2g42680.1 68415.m05283 ethylene-responsive transcriptional
coactivator, putative similar to ethylene-responsive
transcriptional coactivator [Lycopersicon esculentum]
gi|5669634|gb|AAD46402
Length = 142
Score = 138 bits (335), Expect = 3e-33
Identities = 67/134 (50%), Positives = 93/134 (69%), Gaps = 2/134 (1%)
Frame = +2
Query: 98 DWDTVTILRKKPPKASALKTEQAVNAARRQGIPVDTQQKYGAGTNK--QHVTTKNTAKLD 271
DW+ V ++RKKP A+A + E+ VNAARR G ++T +K+ AGTNK T+ NT LD
Sbjct: 10 DWEPV-VIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNTKMLD 68
Query: 272 RETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLG 451
+TE L HE++P +L K IMQ R K ++Q LA I EKPQ++ +YE+G+ IPN +L
Sbjct: 69 DDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQQILS 128
Query: 452 KIERAIGIKLRGKE 493
K+ERA+G KLRGK+
Sbjct: 129 KLERALGAKLRGKK 142
>At3g58680.1 68416.m06540 ethylene-responsive transcriptional
coactivator, putative similar to ethylene-responsive
transcriptional coactivator [Lycopersicon esculentum]
gi|5669634|gb|AAD46402
Length = 142
Score = 137 bits (331), Expect = 9e-33
Identities = 65/134 (48%), Positives = 94/134 (70%), Gaps = 2/134 (1%)
Frame = +2
Query: 98 DWDTVTILRKKPPKASALKTEQAVNAARRQGIPVDTQQKYGAGTNK--QHVTTKNTAKLD 271
DW+ V ++RK+ P A+A + E+ VNAARR G ++T +K+ AG+NK T+ NT KLD
Sbjct: 10 DWEPV-VIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNTKKLD 68
Query: 272 RETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLG 451
+TE L H+++P +L K IMQ R K ++Q LA I EKPQ++ +YE+G+ IPN +L
Sbjct: 69 DDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQQILS 128
Query: 452 KIERAIGIKLRGKE 493
K+ERA+G KLRGK+
Sbjct: 129 KLERALGAKLRGKK 142
>At3g24500.1 68416.m03073 ethylene-responsive transcriptional
coactivator, putative similar to ethylene-responsive
transcriptional coactivator [Lycopersicon esculentum]
gi|5669634|gb|AAD46402
Length = 148
Score = 112 bits (270), Expect = 2e-25
Identities = 57/135 (42%), Positives = 86/135 (63%), Gaps = 4/135 (2%)
Frame = +2
Query: 98 DWDTVTILRKKPPKASALKTEQAVNAARRQGIPVDTQQKYGAGTNKQHVTTK----NTAK 265
DW+ V +L K K+ L+ +AVNAA R G+ V T +K+ AG+NK+ +T NT K
Sbjct: 12 DWEPV-VLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVINTKK 70
Query: 266 LDRETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIV 445
L+ ETE +++ ++ +I + R K MSQ DLA +I E+ Q+V +YE G+ +PN V
Sbjct: 71 LEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVPNQAV 130
Query: 446 LGKIERAIGIKLRGK 490
L K+E+ +G+KLRGK
Sbjct: 131 LAKMEKVLGVKLRGK 145
>At1g67220.1 68414.m07651 zinc finger protein-related similar to
SP|Q09472 E1A-associated protein p300 {Homo sapiens},
SP|Q92793 CREB-binding protein {Homo sapiens}; contains
Pfam profiles PF00569: Zinc finger ZZ type, PF00628:
PHD-finger, PF02135: TAZ zinc finger
Length = 1357
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 137 KASALKTEQAVNAARRQGIPVDTQQ--KYGAGTNKQHVTTKNTAKLDRETEELRHEK 301
K + E+++N ++ GI VD + K GT K VTT N K+ E L +EK
Sbjct: 444 KGNTQTEERSLNHEKKLGIGVDIVEPMKCDEGT-KCEVTTTNKGKIQTEERSLNYEK 499
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 137 KASALKTEQAVNAARRQGIPVDTQQ--KYGAGTNKQHVTTKNTAKLDRETEELRHEK 301
K + E ++N ++ G VD + K GT K VTT N K+ E L HEK
Sbjct: 362 KGNIQTEESSLNHEKKLGTVVDIVEPMKCDEGT-KCEVTTTNKGKIHTEERSLNHEK 417
>At2g21890.1 68415.m02601 mannitol dehydrogenase, putative similar
to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase
(Populus tremuloides) (gi:14279694); contains Pfam
zinc-binding dehydrogenase domain PF00107
Length = 375
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 305 PLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYE 415
PL LG+ ++ G Q GM + + C K +IV+D E
Sbjct: 285 PLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIE 321
>At2g21490.1 68415.m02557 dehydrin family protein contains Pfam
domain, PF00257: Dehydrin
Length = 185
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = +2
Query: 119 LRKKPPKASALKTEQAVNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHE 298
LR+ +S+ + R++ I ++K+G+G +K T T + HE
Sbjct: 105 LRRSGSSSSSSSEDDGQGGRRKKSIKEKIKEKFGSGKHKDEQTPATATTTGPATTDQPHE 164
Query: 299 K 301
K
Sbjct: 165 K 165
>At5g51500.1 68418.m06387 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 540
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 126 LRRIVTVSQSDMFNVDHWYDKTKQEY 49
LR + TV+ + N+D W DKT Y
Sbjct: 24 LRPLTTVADGNSTNIDGWCDKTPYPY 49
>At5g11530.1 68418.m01345 embryonic flower 1 (EMF1) identical to
embryonic flower 1 [Arabidopsis thaliana] GI:15430697
Length = 1096
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/70 (22%), Positives = 37/70 (52%)
Frame = +2
Query: 158 EQAVNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDRETEELRHEKIPLDLGKLIMQG 337
++ + A R+G V Q+ +GA ++ H + T TEE ++ IP+++ +L+ +
Sbjct: 568 QKDASGADRKGKTVMVQEHHGAPRSQSHDRKETT------TEEQNNDDIPMEIVELMAKN 621
Query: 338 RQAKGMSQKD 367
+ + + K+
Sbjct: 622 QYERCLPDKE 631
>At4g32695.1 68417.m04654 hypothetical protein hypothetical protein
yjbI, Bacillus subtilis, PIR2:A69844
Length = 412
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 161 QAVNAARRQGIPVDTQQKYGAGTNKQHVTTKN-TAKLDRETEELRHEKIPLDLGKLIMQG 337
+A+ A IP++ A QHVT + + K D+ TE+L LDL ++ ++
Sbjct: 183 EAIQVADGLTIPIENFGSVEAKVRDQHVTILSCSKKTDKCTEKLERS---LDLDEIRVKD 239
Query: 338 RQAKGMSQ 361
+ A G S+
Sbjct: 240 KDAIGFSK 247
>At4g09980.1 68417.m01634 methyltransferase MT-A70 family protein
low similarity to SP|P25583 Karyogamy protein KAR4
{Saccharomyces cerevisiae},
(N6-adenosine)-methyltransferase [Mus musculus]
GI:10179948; contains Pfam profile PF05063: MT-A70
(S-adenosylmethionine-binding subunit of human mRNA:m6A
methyl-transferase (MTase))
Length = 775
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 552 SPPREFRYFCPPGGCSGWPLSFPRSFI 472
+PP +F PPG G P +FP S I
Sbjct: 506 TPPNPNMFFTPPGSDRGGPPNFPGSNI 532
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,588,038
Number of Sequences: 28952
Number of extensions: 308682
Number of successful extensions: 744
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1755792000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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