Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_O01
(710 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 27 0.23
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.53
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 25 0.93
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 3.8
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 3.8
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 3.8
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 3.8
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 3.8
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 3.8
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 3.8
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 3.8
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 26.6 bits (56), Expect = 0.23
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 71 LSAALLVCEAQLTFTPGWGQGKRSEA-TDYRNDGCSSEDSVYTIYKLIK 214
L+ +++C+ T++ GW GKRS + + N D+V+ +L K
Sbjct: 14 LTITIVMCQT-FTYSHGWTNGKRSTSLEELANRNAIQSDNVFANCELQK 61
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.4 bits (53), Expect = 0.53
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 129 WPQPGVNVS*ASQTNKAADKNQHKYQSATH 40
WP +S S T+ KNQ+K Q+ H
Sbjct: 93 WPGDATGLSNRSSTSSNDPKNQYKNQNNNH 122
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.6 bits (51), Expect = 0.93
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 324 ISYVTLSYLYKHILHNYLPMYLSIIH 401
IS ++ +Y Y + +NY P+Y +II+
Sbjct: 315 ISSLSNNYNYNNYNNNYKPLYYNIIN 340
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 324 ISYVTLSYLYKHILHNYLPMYLSI 395
IS ++ +Y Y + +NY P+Y +I
Sbjct: 82 ISSLSNNYNYNNYNNNYKPLYYNI 105
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 324 ISYVTLSYLYKHILHNYLPMYLSI 395
IS ++ +Y Y + +NY P+Y +I
Sbjct: 82 ISSLSNNYNYNNYNNNYKPLYYNI 105
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 324 ISYVTLSYLYKHILHNYLPMYLSI 395
IS ++ +Y Y + +NY P+Y +I
Sbjct: 82 ISSLSNNYNYNNYNNNYKPLYYNI 105
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 324 ISYVTLSYLYKHILHNYLPMYLSI 395
IS ++ +Y Y + +NY P+Y +I
Sbjct: 82 ISSLSNNYNYNNYNNNYKPLYYNI 105
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 324 ISYVTLSYLYKHILHNYLPMYLSI 395
IS ++ +Y Y + +NY P+Y +I
Sbjct: 315 ISSLSNNYNYNNYNNNYKPLYYNI 338
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 324 ISYVTLSYLYKHILHNYLPMYLSI 395
IS ++ +Y Y + +NY P+Y +I
Sbjct: 315 ISSLSNNYNYNNYNNNYKPLYYNI 338
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 324 ISYVTLSYLYKHILHNYLPMYLSI 395
IS ++ +Y Y + +NY P+Y +I
Sbjct: 315 ISSLSNNYNYNNYNNNYKPLYYNI 338
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 324 ISYVTLSYLYKHILHNYLPMYLSI 395
IS ++ +Y Y + +NY P+Y +I
Sbjct: 304 ISSLSNNYNYNNYNNNYKPLYYNI 327
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,040
Number of Sequences: 438
Number of extensions: 3567
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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