Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_N20
(826 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding pr... 138 6e-35
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 62 8e-12
AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein pro... 48 1e-07
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 4.5
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 4.5
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 22 6.0
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 6.0
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 6.0
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 6.0
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 6.0
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 6.0
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 6.0
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 6.0
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 6.0
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 22 6.0
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 22 6.0
>AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding
protein protein.
Length = 132
Score = 138 bits (334), Expect = 6e-35
Identities = 66/117 (56%), Positives = 83/117 (70%)
Frame = +2
Query: 122 FDEFMKXIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRA 301
FD+FMK +GVG++TRK ++V+P VEL ++ Y L T+S FK TE+KFK GEEFEE+
Sbjct: 17 FDDFMKALGVGIMTRKVGSSVSPVVELTENNGLYTLKTTSPFKNTEIKFKLGEEFEEETV 76
Query: 302 DGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAKDVTCTRVYKVQ 472
DG KVKSVCT +GN L QVQK + T REF EMKA+M D+ CTRVYK+Q
Sbjct: 77 DGRKVKSVCTLDGNKLIQVQKGEK--QTTIEREFSSTEMKAIMKVDDIICTRVYKIQ 131
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 79 EFVGKQYKXXSSE 117
+F+GK+YK SSE
Sbjct: 3 DFLGKRYKLYSSE 15
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 61.7 bits (143), Expect = 8e-12
Identities = 43/119 (36%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Frame = +2
Query: 122 FDEFMKXIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEE--D 295
F+EF K +G + P+ EL K+GDE+ +SS T FK FEE
Sbjct: 16 FEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTYTKTFKMNVPFEETLP 74
Query: 296 RADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKA-VMTAK-DVTCTRVYK 466
K ++V + EGNT K + D L+VT + EF E+ + T K DV TRVYK
Sbjct: 75 SLPDRKFQTVTSIEGNTFKTETQVNDSLKVTRLYEFSDNELLVHISTNKSDVKATRVYK 133
>AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein
protein.
Length = 105
Score = 47.6 bits (108), Expect = 1e-07
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +2
Query: 122 FDEFMKXIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEE--D 295
F+EF K +G + P+ EL K+GDE+ +SS T FK FEE
Sbjct: 14 FEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTYTKTFKMNVPFEETLP 72
Query: 296 RADGAKVKSVCTFEGNTLKQVQKAPDGLEVT 388
K ++V + EGNT K + D L+VT
Sbjct: 73 SLPDRKFQTVTSIEGNTFKTETQVNDSLKVT 103
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = -2
Query: 264 FISVVLKVEEVTKLYSSPSLRSSTV 190
FIS+++ +E+ + +SP L + T+
Sbjct: 9 FISLIILNDEIYNIIASPQLNNPTL 33
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.6 bits (46), Expect = 4.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 453 PESTRSSKDSIPRSGVGAADSRTSR 527
P ++ +K PR G GAA R SR
Sbjct: 429 PPRSKKNKLKKPRQGDGAAVKRKSR 453
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 22.2 bits (45), Expect = 6.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 326 CTFEGNTLKQVQKAPDGL 379
CT EGN LK+V PD L
Sbjct: 57 CTAEGNELKRV--LPDAL 72
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 716 SLRAQAPRCCYRGR*TYFSLASPPLAFAIR 627
S++ Q PR Y G T F PP A+ R
Sbjct: 140 SIQEQVPRFRYIGPPTPFPRFIPPNAYRFR 169
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 716 SLRAQAPRCCYRGR*TYFSLASPPLAFAIR 627
S++ Q PR Y G T F PP A+ R
Sbjct: 140 SIQEQVPRFRYIGPPTPFPRFIPPNAYRFR 169
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 716 SLRAQAPRCCYRGR*TYFSLASPPLAFAIR 627
S++ Q PR Y G T F PP A+ R
Sbjct: 140 SIQEQVPRFRYIGPPTPFPRFIPPNAYRFR 169
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 716 SLRAQAPRCCYRGR*TYFSLASPPLAFAIR 627
S++ Q PR Y G T F PP A+ R
Sbjct: 140 SIQEQVPRFRYIGPPTPFPRFIPPNAYRFR 169
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 716 SLRAQAPRCCYRGR*TYFSLASPPLAFAIR 627
S++ Q PR Y G T F PP A+ R
Sbjct: 140 SIQEQVPRFRYIGPPTPFPRFIPPNAYRFR 169
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 716 SLRAQAPRCCYRGR*TYFSLASPPLAFAIR 627
S++ Q PR Y G T F PP A+ R
Sbjct: 144 SIQEQVPRFRYIGPPTPFPRFIPPNAYRFR 173
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 716 SLRAQAPRCCYRGR*TYFSLASPPLAFAIR 627
S++ Q PR Y G T F PP A+ R
Sbjct: 140 SIQEQVPRFRYIGPPTPFPRFIPPNAYRFR 169
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 6.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 716 SLRAQAPRCCYRGR*TYFSLASPPLAFAIR 627
S++ Q PR Y G T F PP A+ R
Sbjct: 365 SIQEQVPRFRYIGPPTPFPRFIPPNAYRFR 394
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 22.2 bits (45), Expect = 6.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 326 CTFEGNTLKQVQKAPDGL 379
CT EGN LK+V PD L
Sbjct: 57 CTAEGNELKRV--LPDAL 72
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 22.2 bits (45), Expect = 6.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 326 CTFEGNTLKQVQKAPDGL 379
CT EGN LK+V PD L
Sbjct: 57 CTAEGNELKRV--LPDAL 72
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,723
Number of Sequences: 438
Number of extensions: 3615
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -