Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_N18
         (763 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC039260-1|AAH39260.1|  765|Homo sapiens RBM12B protein protein.       31   5.9  
X70040-1|CAA49634.1| 1400|Homo sapiens tyrosine kinase protein.        30   7.8  

>BC039260-1|AAH39260.1|  765|Homo sapiens RBM12B protein protein.
          Length = 765

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 640 DWNAPAHQDWNAPAHQDWNAPAHQSWNGAPSWQSG 744
           D+  P   D+  P  +DW  P  + + G P   SG
Sbjct: 602 DFRCPPEDDFRHPREEDWRRPPPEHFGGLPQSTSG 636


>X70040-1|CAA49634.1| 1400|Homo sapiens tyrosine kinase protein.
          Length = 1400

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 648 CPRPPGLERSRSPGLECSRSPIMERSS 728
           CP PPGLE + SP   C   P++  SS
Sbjct: 407 CPNPPGLE-ALSPNTSCRHFPLLVSSS 432


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.315    0.127    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,715,654
Number of Sequences: 237096
Number of extensions: 1849535
Number of successful extensions: 6609
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6574
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)