BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P02_F_N17 (822 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28 SB_27124| Best HMM Match : NHL (HMM E-Value=6.4e-17) 31 1.1 SB_48379| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5 SB_51558| Best HMM Match : DSS1_SEM1 (HMM E-Value=0.2) 30 2.6 SB_49105| Best HMM Match : NDK (HMM E-Value=5.5) 30 2.6 SB_7118| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4 SB_45724| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6 SB_4132| Best HMM Match : cNMP_binding (HMM E-Value=5.9e-14) 29 4.6 SB_27051| Best HMM Match : DUF827 (HMM E-Value=1.8) 29 6.0 SB_28276| Best HMM Match : Cerato-platanin (HMM E-Value=6.7) 28 8.0 >SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2353 Score = 33.1 bits (72), Expect = 0.28 Identities = 24/91 (26%), Positives = 37/91 (40%) Frame = -2 Query: 731 REPHEPHTEALXSSPVLPQRRQEVLDLLKHQPIYRLLQTEGVRFLRSLQTEGVRFLRSLQ 552 RE + H L S PVL L LL+ + +LL+ G + E +LR Sbjct: 2090 REDKDSHVSHLTSGPVL------ALSLLRENAVGKLLEVVGPSCPQVAHKESQFYLRGSY 2143 Query: 551 GSQGVLRTMQLLQVQSVALRFSRSLWHPSLC 459 G+ + + S ++R L+H LC Sbjct: 2144 GTDRIRNAIYASPSYSASVRDHMLLFHDGLC 2174 >SB_27124| Best HMM Match : NHL (HMM E-Value=6.4e-17) Length = 415 Score = 31.1 bits (67), Expect = 1.1 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = -3 Query: 286 GSIFPDDALSVSPASNHHL-IHRIRFLRACRERDVGIIRCSDFEL 155 GSIF D VS NH L + R + L C+ER++G D EL Sbjct: 303 GSIFHDKTFIVSDLRNHVLRVFRQKGLTICKERNIGQRGGKDGEL 347 >SB_48379| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 108 Score = 30.7 bits (66), Expect = 1.5 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +1 Query: 553 WRLRRKRTPSVWRLRRKRTPSVWRSR 630 WR + R VWR + R VWRS+ Sbjct: 41 WRSKNNRLGGVWRSKNNRLGGVWRSK 66 Score = 30.7 bits (66), Expect = 1.5 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +1 Query: 553 WRLRRKRTPSVWRLRRKRTPSVWRSR 630 WR + R VWR + R VWRS+ Sbjct: 52 WRSKNNRLGGVWRSKNNRLGGVWRSK 77 Score = 29.9 bits (64), Expect = 2.6 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +1 Query: 553 WRLRRKRTPSVWRLRRKRTPSVWRS 627 WR + R VWR + R VWRS Sbjct: 63 WRSKNNRLGGVWRSKNNRLGGVWRS 87 Score = 29.5 bits (63), Expect = 3.4 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = +1 Query: 553 WRLRRKRTPSVWRLRRKRTPSVWRSR 630 WR + + VWR + R VWRS+ Sbjct: 30 WRSKNNKLGGVWRSKNNRLGGVWRSK 55 >SB_51558| Best HMM Match : DSS1_SEM1 (HMM E-Value=0.2) Length = 878 Score = 29.9 bits (64), Expect = 2.6 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = +2 Query: 209 QESDPMYEVMIGGWGNAKSVIRKN-RTKPDKVEIESPGILNGG 334 Q+ D MYEV+I + +RK+ R+ D E E PGI+ GG Sbjct: 766 QQQDQMYEVLI------HNALRKSFRSDEDDDENEEPGIIRGG 802 >SB_49105| Best HMM Match : NDK (HMM E-Value=5.5) Length = 92 Score = 29.9 bits (64), Expect = 2.6 Identities = 22/87 (25%), Positives = 35/87 (40%) Frame = -2 Query: 719 EPHTEALXSSPVLPQRRQEVLDLLKHQPIYRLLQTEGVRFLRSLQTEGVRFLRSLQGSQG 540 + H L S PVL L LL+ + +LL+ G + E +LR G+ Sbjct: 1 DSHVSHLTSGPVL------ALSLLRENAVGKLLEVVGPSCPQVAHKESQFYLRGSYGTDR 54 Query: 539 VLRTMQLLQVQSVALRFSRSLWHPSLC 459 + + S ++R L+H LC Sbjct: 55 IRNAIYASPSYSASVRDHMLLFHDGLC 81 >SB_7118| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 234 Score = 29.5 bits (63), Expect = 3.4 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Frame = +2 Query: 203 GPQESDPMYEVMIGGWGNAKSVIRKNRT-KPDKVEIESPGILNGGEY 340 GP + + +G W S R +T P KV + PGI NG Y Sbjct: 84 GPTQDCDVNSGEVGPWKEVPSCSRVGQTGDPSKVRVYGPGIENGLRY 130 >SB_45724| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 370 Score = 29.1 bits (62), Expect = 4.6 Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = +3 Query: 519 QLHCTQHPL-ATLEATEETYPLRLEATEETYPLRLE 623 +L T +P LE T Y LRLE T Y LRLE Sbjct: 118 RLELTANPYNLRLELTANPYNLRLELTSNPYNLRLE 153 >SB_4132| Best HMM Match : cNMP_binding (HMM E-Value=5.9e-14) Length = 193 Score = 29.1 bits (62), Expect = 4.6 Identities = 13/42 (30%), Positives = 25/42 (59%) Frame = -2 Query: 746 GSWHLREPHEPHTEALXSSPVLPQRRQEVLDLLKHQPIYRLL 621 GS+H EP + + EAL +S VL ++++ + + P + L+ Sbjct: 84 GSFHSEEPSKFYIEALENSTVLQIQKEDQIRMFVDYPKFNLI 125 >SB_27051| Best HMM Match : DUF827 (HMM E-Value=1.8) Length = 283 Score = 28.7 bits (61), Expect = 6.0 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 7/70 (10%) Frame = +2 Query: 143 SGSVQFKVRAANDAHVALTTGPQESDPMYEVMI-------GGWGNAKSVIRKNRTKPDKV 301 SGSV + V A +H L + + P+Y + + G V+R +P+K Sbjct: 84 SGSVNYFVAPAESSHSQLVLIEELNQPIYSLTLKIIICLSETTGTLPLVLRNALPRPEKY 143 Query: 302 EIESPGILNG 331 SPG L G Sbjct: 144 PENSPGTLTG 153 >SB_28276| Best HMM Match : Cerato-platanin (HMM E-Value=6.7) Length = 225 Score = 28.3 bits (60), Expect = 8.0 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +2 Query: 299 VEIESPGILNGGEYRGFWVRWDSGIISAGREGEAIPFISWSDPEPFPV-YYV 451 + I + GI + + FWV + S + G I W+DP+P V YY+ Sbjct: 1 LNIATSGITSAEKRMVFWVDFRSANLVLGSGATVIA--QWTDPDPLEVGYYI 50 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,283,025 Number of Sequences: 59808 Number of extensions: 523782 Number of successful extensions: 1653 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1472 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1648 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2299585728 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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