Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_N15
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily ass... 140 1e-33
Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical p... 97 1e-20
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 80 2e-15
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 80 2e-15
AC024777-1|AAF60563.1| 133|Caenorhabditis elegans Hypothetical ... 41 0.001
U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane p... 30 2.2
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 29 5.0
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 28 8.7
AC006833-9|AAF60943.1| 318|Caenorhabditis elegans Saposin-like ... 28 8.7
>U28740-4|AAA68319.2| 276|Caenorhabditis elegans Temporarily
assigned gene nameprotein 132 protein.
Length = 276
Score = 140 bits (339), Expect = 1e-33
Identities = 83/210 (39%), Positives = 115/210 (54%), Gaps = 1/210 (0%)
Frame = +3
Query: 159 VMNAEREIRLAFIRKVYGLLTVQLLATVSIAAVFMFVEPVQTFIHTNNWMMIIAFILSMG 338
V A R IR+AF+RKV G++ QLL T+ I A + + + W++ + S+
Sbjct: 62 VGKANRMIRIAFLRKVLGIVGFQLLFTIGICAAIYNIPNSNQLLQKHAWIVFPNLLGSIA 121
Query: 339 TLIALIVKRRDSPANLYLLAAFTVIQAYTIGVVVSYYNTMVVLQALALTFAVVFSLTLYT 518
+IAL V R+ P N LLAAFT +QA T+G VV+ + VVL+A +T VV SL YT
Sbjct: 122 LIIALHVYAREVPLNYVLLAAFTAVQAVTMGCVVTLFEAKVVLEAAVITGLVVASLFAYT 181
Query: 519 LNSKRDFSFIGY-MXXXXXXXXXXXXXXXXXXQSAAFEMALSIVGAIFFXMFLVYDTHQM 695
L +KRDFS +GY S A +++ GA F + LV D +
Sbjct: 182 LQNKRDFS-VGYASMGSLLCVLLWAGIFQMFFMSPAVNFVINVFGAGLFCVLLVIDLDMI 240
Query: 696 MRVLSPEEYILATINLYLDILNLFLYILXI 785
M SPE+YI A ++LY+DILNLF+ IL I
Sbjct: 241 MYRFSPEDYICACVSLYMDILNLFIRILQI 270
>Z70753-11|CAA94766.1| 244|Caenorhabditis elegans Hypothetical
protein F40F9.2 protein.
Length = 244
Score = 97.5 bits (232), Expect = 1e-20
Identities = 68/234 (29%), Positives = 111/234 (47%), Gaps = 11/234 (4%)
Frame = +3
Query: 117 GKESVEDDFAYRNNVMNAEREIRLAFIRKVYGLLTVQLLATVSIAAVFMFVEPVQTFIHT 296
G + +DD + N+ + + +R AF+RKV+ L+T+ T + + M EP Q ++
Sbjct: 6 GATTAQDDPDGKYNLHFSSQTVRAAFVRKVFMLVTIMFAITAAFCVIPMVSEPFQDWVKN 65
Query: 297 NNWMMIIAFILSMGTLIALIV---KRRDSPANLYLLAAFTVIQAYTIGVVVSYYNTMVVL 467
N W+ IA I+ + IAL RR P N+ LL FT+ A V + YN VL
Sbjct: 66 NFWVYFIAIIVFLVVAIALSCCGNLRRQFPVNIILLTIFTLSAAVMTMFVTACYNVQSVL 125
Query: 468 QALALTFAVVFSLTLYTLNSKRDFSF---IGYMXXXXXXXXXXXXXXXXXXQSAAFEMAL 638
L +T S+ ++++ +K D + I +M + F ++
Sbjct: 126 ICLCITTVCSGSVIIFSMKTKSDLTSKMGIAFMLSMVLFSFGIFALIFTLAFNWQFLYSV 185
Query: 639 -SIVGAIFFXMFLVYDTHQMM----RVLSPEEYILATINLYLDILNLFLYILXI 785
S + A+ +L D +M LSPE+YI A + ++LDILN+FL +L I
Sbjct: 186 YSGLAALLMMFYLAIDVQLLMGGRKYELSPEDYIFAAMEIFLDILNIFLMLLNI 239
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 79.8 bits (188), Expect = 2e-15
Identities = 51/240 (21%), Positives = 116/240 (48%), Gaps = 11/240 (4%)
Frame = +3
Query: 99 EDCELGGKESVEDDFAYRNNVMNAEREIRLAFIRKVYGLLTVQLLATVSIAAVFMFVEPV 278
E+ + GG ++ + ++++ + ++ +R AF+RKV+ L+ + L ++ + +
Sbjct: 56 ENGQHGGGDNPDGKYSFQFS----DKTVRAAFVRKVFSLVFIMLCIVAAVTVIPWVHDDT 111
Query: 279 QTFIHTNNWMMIIAFILSMGTLIALIV---KRRDSPANLYLLAAFTVIQAYTIGVVVSYY 449
+ N+ + + ++++ T ++L+ RR P NL + FT+ + V+ +++
Sbjct: 112 MRMVRRNSALYLGSYVIFFVTYLSLVCCEGVRRKFPVNLIVTGIFTLATSVMTMVISAHH 171
Query: 450 NTMVVLQALALTFAVVFSLTLYTLNSKRDF-SFIGYMXXXXXXXXXXXXXXXXXXQSAAF 626
+ VVL ALA+ FS+ + +K D + +GY+
Sbjct: 172 DANVVLLALAICIGCTFSIVIVASQTKFDLTAHMGYILIISMCFMFFGLVVVICSMFFKI 231
Query: 627 E---MALSIVGAIFFXMFLVYDTHQMM----RVLSPEEYILATINLYLDILNLFLYILXI 785
+ M ++ GA+ ++L D +M +SPEEYI A++ +++DI+ +F ++L +
Sbjct: 232 KFLMMVYALGGALIMMLYLFLDVQMLMGGKKYEISPEEYIFASVQIFIDIVQMFWFLLSL 291
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 79.8 bits (188), Expect = 2e-15
Identities = 51/240 (21%), Positives = 116/240 (48%), Gaps = 11/240 (4%)
Frame = +3
Query: 99 EDCELGGKESVEDDFAYRNNVMNAEREIRLAFIRKVYGLLTVQLLATVSIAAVFMFVEPV 278
E+ + GG ++ + ++++ + ++ +R AF+RKV+ L+ + L ++ + +
Sbjct: 56 ENGQHGGGDNPDGKYSFQFS----DKTVRAAFVRKVFSLVFIMLCIVAAVTVIPWVHDDT 111
Query: 279 QTFIHTNNWMMIIAFILSMGTLIALIV---KRRDSPANLYLLAAFTVIQAYTIGVVVSYY 449
+ N+ + + ++++ T ++L+ RR P NL + FT+ + V+ +++
Sbjct: 112 MRMVRRNSALYLGSYVIFFVTYLSLVCCEGVRRKFPVNLIVTGIFTLATSVMTMVISAHH 171
Query: 450 NTMVVLQALALTFAVVFSLTLYTLNSKRDF-SFIGYMXXXXXXXXXXXXXXXXXXQSAAF 626
+ VVL ALA+ FS+ + +K D + +GY+
Sbjct: 172 DANVVLLALAICIGCTFSIVIVASQTKFDLTAHMGYILIISMCFMFFGLVVVICSMFFKI 231
Query: 627 E---MALSIVGAIFFXMFLVYDTHQMM----RVLSPEEYILATINLYLDILNLFLYILXI 785
+ M ++ GA+ ++L D +M +SPEEYI A++ +++DI+ +F ++L +
Sbjct: 232 KFLMMVYALGGALIMMLYLFLDVQMLMGGKKYEISPEEYIFASVQIFIDIVQMFWFLLSL 291
>AC024777-1|AAF60563.1| 133|Caenorhabditis elegans Hypothetical
protein Y42H9AR.2 protein.
Length = 133
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Frame = +3
Query: 435 VVSYYNTMVVLQALALTFAVVFSLTLYTLNSKRDFSF---IGYMXXXXXXXXXXXXXXXX 605
+ + Y+ VL +L +T S+ L+ +K+D + + ++
Sbjct: 5 ITATYSADAVLISLLITTGCSASIILFAATTKKDLTSCLGVAFILGICLMLFGLMACIFC 64
Query: 606 XXQSAAF-EMALSIVGAIFFXMFLVYDTHQMM---RV-LSPEEYILATINLYLDILNLFL 770
+ F + +++GA+ +L D +M RV +SPEEYI A ++++DIL +FL
Sbjct: 65 IFLNWQFLYIVYAVLGALLCMFYLAIDIQLIMGGRRVEISPEEYIFAATHVFVDILGMFL 124
Query: 771 YILXI 785
IL +
Sbjct: 125 NILGV 129
>U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane
protease (impas)family protein 3 protein.
Length = 516
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 351 LIVKRRDSPANLYLLAAFTVIQAYTIGVVVSYYNTMVVLQALALTFAVVFSLTLYTL 521
+I+ RD+ N LAA ++ VV Y++M A+TFA VF+ ++++
Sbjct: 419 MILVPRDTKGNKQSLAALDIMVPGVFLNVVLKYSSMYDTNLFAITFAAVFASLVFSV 475
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = -3
Query: 592 PPKMRTVKPATSMYPMNEKSRLELSVYSVRENTTANVKARACNTTMVL*YDTTTPIVYAW 413
PP T++ T ++ VY+V N T NV A AC ++ V +V W
Sbjct: 539 PPTEDTLQQNTLWPEQHKLYGHGYEVYAVTANPTGNVLATACKSSHV-----EHSVVMLW 593
Query: 412 ITVNAARRYRLAGESRRFT 356
T N +++ + G T
Sbjct: 594 STSNWSKKSEIIGHQLTVT 612
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 231 GAALSGDRRLSV*RQDGSPFQHSLHCC 151
G AL+G + + + PFQH HCC
Sbjct: 485 GYALNGHMDALLSQLEALPFQHHFHCC 511
>AC006833-9|AAF60943.1| 318|Caenorhabditis elegans Saposin-like
protein family protein7 protein.
Length = 318
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = -3
Query: 565 ATSMYPMNEKSRLELSVYSVRENTTANVKARACNTTMVL*YDTTTPIVYAWITVNAARR 389
AT++YP E +EL + R TT T TTT + ++ RR
Sbjct: 136 ATTLYPEEEAEEIELPTTTTRRRTTTTTTTTTPPPTTTTTVRTTTALTRPNPSIEQVRR 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,624,432
Number of Sequences: 27780
Number of extensions: 410042
Number of successful extensions: 1057
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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