Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_N14
(740 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 259 2e-69
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 256 2e-68
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 196 2e-50
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 167 8e-42
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 107 1e-23
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 96 3e-20
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 93 3e-19
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 91 9e-19
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 1e-18
SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05) 79 5e-15
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 4e-11
SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11) 57 2e-08
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06) 31 1.3
SB_40519| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13) 29 5.2
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 29 5.2
SB_56070| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_6375| Best HMM Match : DUF1388 (HMM E-Value=7.5) 28 9.1
SB_58547| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_11455| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 259 bits (634), Expect = 2e-69
Identities = 119/161 (73%), Positives = 131/161 (81%)
Frame = +3
Query: 258 KQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQ 437
K YFD+ G P GRIV++L D VPKTAENFRALCTGEKGFGYKGSSFHR+IP FMCQ
Sbjct: 3 KTTYFDIEIGGAPAGRIVMELRDDVVPKTAENFRALCTGEKGFGYKGSSFHRVIPGFMCQ 62
Query: 438 GGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLD 617
GGDFT +GTGGKSIYG F+DENF LKHTGPGILSMANAGP TNGSQFF+ T T WLD
Sbjct: 63 GGDFTRGDGTGGKSIYGAKFADENFNLKHTGPGILSMANAGPGTNGSQFFLCTAKTSWLD 122
Query: 618 RKHVVFGSVVEGMDVVXKMEKLGSKSGKPIKKVVISXSGEL 740
KHVVFGSV +GMDVV K+EK+GS SGK KKVVI+ S +
Sbjct: 123 GKHVVFGSVKDGMDVVKKIEKVGSDSGKTSKKVVIADSASV 163
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 256 bits (626), Expect = 2e-68
Identities = 117/160 (73%), Positives = 130/160 (81%)
Frame = +3
Query: 261 QVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQG 440
+V+FD+T GRIV++L +D VP TAENFR LCT EKGFGYKGSSFHRIIP FMCQG
Sbjct: 138 RVFFDITIGERSAGRIVMELRSDVVPMTAENFRCLCTHEKGFGYKGSSFHRIIPQFMCQG 197
Query: 441 GDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDR 620
GDFT HNGTGGKSIYG F DENF LKHTG G+LSMAN+GPNTNGSQFF+TT T WLD
Sbjct: 198 GDFTKHNGTGGKSIYGAKFEDENFVLKHTGAGVLSMANSGPNTNGSQFFLTTEKTDWLDG 257
Query: 621 KHVVFGSVVEGMDVVXKMEKLGSKSGKPIKKVVISXSGEL 740
KHVVFG+V+EG DVV KME +GS+SGK KKVVI GEL
Sbjct: 258 KHVVFGNVIEGFDVVRKMEAVGSQSGKASKKVVIDDCGEL 297
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 196 bits (478), Expect = 2e-50
Identities = 92/162 (56%), Positives = 113/162 (69%), Gaps = 1/162 (0%)
Frame = +3
Query: 258 KQVYFDVTADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQ 437
K+V+ DV+ G+P GR+++ L D PKT NF AL E+GFGYK S FHR+I +FM Q
Sbjct: 26 KKVWMDVSIGGQPAGRVILGLFGDTAPKTVANFVALADKEQGFGYKDSIFHRVIKNFMIQ 85
Query: 438 GGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLD 617
GGDFTN +GTGG SIYG+ F DENF LKH GPG L MANAG NTNGSQF+ITT+ T WLD
Sbjct: 86 GGDFTNKDGTGGYSIYGKYFDDENFNLKHYGPGWLCMANAGKNTNGSQFYITTIKTSWLD 145
Query: 618 RKHVVFGSVVEGMDVVXKMEKLG-SKSGKPIKKVVISXSGEL 740
H FG V+EGMDVV ++E KP+ +V I+ G +
Sbjct: 146 GSHTCFGKVLEGMDVVRRIENTRVDTHDKPLDEVKITGIGSI 187
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 167 bits (406), Expect = 8e-42
Identities = 91/153 (59%), Positives = 106/153 (69%), Gaps = 18/153 (11%)
Frame = +3
Query: 258 KQVYFDVTADGEPLGRI------VIK----LNTDEVPKT-AENFRAL-----CT--GEKG 383
K+V+FD+T GE GRI +IK L T V NFR CT +KG
Sbjct: 27 KKVFFDITIGGEKAGRIEIGLFVIIKTYYLLATRLVESLIGTNFRYFDTYYCCTIESQKG 86
Query: 384 FGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGP 563
FGYK S FHR+I DFM QGGDFT +GTGGKSIYG+ F+DENFKL+H G G LSMANAG
Sbjct: 87 FGYKNSIFHRVIQDFMIQGGDFTKGDGTGGKSIYGQKFADENFKLQHYGAGWLSMANAGK 146
Query: 564 NTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDV 662
+TNGSQFFITTV TPWLD +HVVFG V++GM+V
Sbjct: 147 DTNGSQFFITTVKTPWLDGRHVVFGKVLKGMEV 179
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 107 bits (256), Expect = 1e-23
Identities = 52/91 (57%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Frame = +3
Query: 459 NGTGGKSIYGRTFSDENFK-LKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVF 635
+GTGG+SI+G F DE + L+H P +SMANAGPNTNGSQFFIT VPTPWLD KH VF
Sbjct: 2 DGTGGESIWGGEFEDEFHRNLRHDRPYTVSMANAGPNTNGSQFFITVVPTPWLDNKHTVF 61
Query: 636 GSVVEGMDVVXKME--KLGSKSGKPIKKVVI 722
G VV+GMDV ++ K K+ +P + + I
Sbjct: 62 GRVVKGMDVAQQISLVKTNPKNDQPYEDIKI 92
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 95.9 bits (228), Expect = 3e-20
Identities = 44/74 (59%), Positives = 53/74 (71%)
Frame = +3
Query: 519 KHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVXKMEKLGSKSG 698
+H PG+LSMAN+GPNTNGSQFFITTVPTP LD +HVVFG V++GMDVV ++E
Sbjct: 188 EHDKPGLLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKGMDVVRELEATPVDDS 247
Query: 699 KPIKKVVISXSGEL 740
P +I GEL
Sbjct: 248 SPKSPCIIEECGEL 261
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 92.7 bits (220), Expect = 3e-19
Identities = 40/93 (43%), Positives = 61/93 (65%)
Frame = +3
Query: 462 GTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGS 641
G GG+S+YG F DE+F + H G++ MAN G +TNGSQF+IT P PW+D K+V FG
Sbjct: 46 GIGGESVYGPLFEDEDFSVAHNRRGVVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQ 105
Query: 642 VVEGMDVVXKMEKLGSKSGKPIKKVVISXSGEL 740
V+EG++V+ +E + + +P + ++ G L
Sbjct: 106 VIEGLNVLDVLEGQETFNERPKVECRVADCGVL 138
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 91.1 bits (216), Expect = 9e-19
Identities = 49/95 (51%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Frame = +3
Query: 459 NGTGGKSIYGRTFSDENFKLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFG 638
NGTGG+SIYG TF DE F+ KH P +LSMAN GPNTNGSQFFI HVVFG
Sbjct: 25 NGTGGESIYGGTFGDECFEFKHERPMLLSMANRGPNTNGSQFFII----------HVVFG 74
Query: 639 SVVEGMDVVXKMEKL-GSKSGKPIKKVVISXSGEL 740
V++G ++V ++E L ++ +P V +S GEL
Sbjct: 75 HVIQGEELVRQIESLPTNEKNRPNADVKVSNCGEL 109
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 90.6 bits (215), Expect = 1e-18
Identities = 42/65 (64%), Positives = 48/65 (73%)
Frame = +3
Query: 546 MANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVXKMEKLGSKSGKPIKKVVIS 725
MANAG +TNGSQFFITTV T WLD KHVVFG V+EGMDVV K+E + K P+K +I
Sbjct: 1 MANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKLENVNVKGSTPVKTCMID 60
Query: 726 XSGEL 740
SG L
Sbjct: 61 DSGTL 65
>SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05)
Length = 49
Score = 78.6 bits (185), Expect = 5e-15
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +3
Query: 537 ILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFGSVVEGMDVVXKM 674
ILSMANAGP TNGSQFF+ T T WLD KHVVFGSV +GMDVV KM
Sbjct: 2 ILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKM 47
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 65.7 bits (153), Expect = 4e-11
Identities = 48/135 (35%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Frame = +3
Query: 297 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 476
LG I I+L+ D+ P + NF A + G+ Y G+ FHR+IP FM QGG F
Sbjct: 32 LGEIEIELDADKAPISTANFLAYV--DSGY-YAGTQFHRVIPGFMVQGGGFDADMQQKDT 88
Query: 477 SIYGRTFSDENFKLKHTGPGILSMANAGPNTNG-SQFFITTVPTPWLDR-----KHVVFG 638
+ +D H G L+MA + SQFFI +LD + VFG
Sbjct: 89 QAPIKNEADNGL---HNVRGTLAMARTQVRDSATSQFFINHKDNAFLDHGSRDFGYAVFG 145
Query: 639 SVVEGMDVVXKMEKL 683
VV+GMDVV K+ ++
Sbjct: 146 KVVKGMDVVDKIAQV 160
>SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11)
Length = 48
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/46 (60%), Positives = 32/46 (69%), Gaps = 8/46 (17%)
Frame = +3
Query: 300 GRIVIKLNTDEVPKTAENFRALCTGEKGFG--------YKGSSFHR 413
GR++ +L D+VPKTAENFRALCTGEKG G YKG FHR
Sbjct: 2 GRVLFELFADKVPKTAENFRALCTGEKGIGPSTGKPLHYKGCPFHR 47
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +3
Query: 513 KLKHTGPGILSMANAGPNTNGSQFFITTVPTPWLDRKHVVFG 638
+ H G +SMAN GPN+NGSQFFI P LD K+ +FG
Sbjct: 298 RCNHNARGTVSMANNGPNSNGSQFFICYGKQPHLDMKYTMFG 339
>SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06)
Length = 454
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +3
Query: 297 LGRIVIKLNTDEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGK 476
+G I I+L E PK NF LC +G+ Y + FHRI+ +GG+ N G G
Sbjct: 12 VGDIDIELWGKETPKACRNFIQLCL--EGY-YDNTIFHRIV-----KGGE--NIYGQSGF 61
Query: 477 SIYGRT 494
+ G T
Sbjct: 62 KVTGNT 67
>SB_40519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 795
Score = 29.5 bits (63), Expect = 3.0
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = +3
Query: 213 IYSAAALRFASTQP-DKQVYFDVT--ADGEPLGRIVIKLNTDEVPKTAENFRALCTGEKG 383
++ +LR AS +P D+ Y V A G P+ + +IKLN K ++ CT E
Sbjct: 90 LFENGSLRIASLRPYDETTYHCVVIKASGLPVRKNIIKLNVSCEGKITQSSHEACT-EDA 148
Query: 384 FGYKGSSFHRIIPDFMCQGGDFTNHNGTG 470
+ HR P + G ++ HN G
Sbjct: 149 IILPCPAKHRTNPRRL-TGVRWSQHNDDG 176
>SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 392
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -2
Query: 397 PLYPKPFSPVHRALKFSAVFGTSSVFNFMTIRPN-GSPSAVT 275
PL+P P P L+ V T + F +RPN PS++T
Sbjct: 189 PLFPSPAMPPRHCLRAEGVTLTGASPTFGDLRPNWAPPSSIT 230
>SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13)
Length = 278
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 351 NFRALCTGEKGFGYKGSSF 407
NF + TG+KGFG++G F
Sbjct: 67 NFSSYSTGQKGFGFEGMDF 85
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 351 NFRALCTGEKGFGYKGSSF 407
NF + TG+KGFG++G F
Sbjct: 132 NFSSYSTGQKGFGFEGMDF 150
>SB_56070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -3
Query: 273 RNKLVYQVESKQNEVLQQSILSH*LKFAEALIPVS*LGFSSQTRYMRP 130
R +L+ + + + ++ +L H L+ A PV +G S+TR RP
Sbjct: 44 RKRLLRVAKDRPRKHVRPEVLGHLLQGAPPKAPVCGIGTQSETRLCRP 91
>SB_6375| Best HMM Match : DUF1388 (HMM E-Value=7.5)
Length = 173
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -3
Query: 273 RNKLVYQVESKQNEVLQQSILSH*LKFAEALIPVS*LGFSSQTRYMRP 130
R +L+ + + + ++ +L H L+ A PV +G S+TR RP
Sbjct: 94 RKRLLRVAKDRPRKHVRPEVLGHLLQGAPPKAPVCGIGTQSETRLCRP 141
>SB_58547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -3
Query: 273 RNKLVYQVESKQNEVLQQSILSH*LKFAEALIPVS*LGFSSQTRYMRP 130
R +L+ + + + ++ +L H L+ A PV +G S+TR RP
Sbjct: 131 RKRLLRVAKDRPRKHVRPEVLGHLLQGAPPKAPVCGIGTQSETRLCRP 178
>SB_11455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +2
Query: 359 SSVYW*KRFWVQGFIIS*NNTRLHVSR--W-RFYQSQRYRRKVYLRAYLLR*EFQIKAYW 529
+ VY K +W Q +I + ++++ W + Y + Y +VY+ + + K YW
Sbjct: 49 NQVYIDKHYWNQVYIDKHYSNQVYIDEHYWNQVYIDKHYSNQVYIDKHYWNQVYIDKHYW 108
Query: 530 AWNFINGECWTE 565
+I+ W +
Sbjct: 109 NQVYIDKHYWNQ 120
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,403,293
Number of Sequences: 59808
Number of extensions: 471895
Number of successful extensions: 940
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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