Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_N08
         (497 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   1.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   1.9  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    23   4.4  
AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like precu...    23   5.8  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +3

Query: 372 DKCGNKVNEIYPYIIQEIKPTLTELGIDTPEELGYDK 482
           +K   K+NE+Y  I +EI+P L +L  +    + + K
Sbjct: 186 EKKDAKLNELYAVIREEIEPKLEKLRKEREHYIEFQK 222


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 246 KGMNDLCGMDLVPDPKIIKAALHACR 323
           +G+  LC +  V +  I K  LHACR
Sbjct: 618 RGITSLCAIAKVFELVIYKNLLHACR 643


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 311 KGSFDNLWVGNEIHTTEVIHSFAD 240
           KG FD  W  N+ HT E IH++ D
Sbjct: 123 KGPFD--W--NDYHTLEEIHAWLD 142


>AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like
           precursor protein.
          Length = 267

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 362 FYKPDCKGIIIDSSACMKG 306
           +Y P+   ++ID   C KG
Sbjct: 235 YYTPNSTAVVIDPKECHKG 253


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,789
Number of Sequences: 2352
Number of extensions: 10977
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)