Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_N08
         (497 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g51540.1 68414.m05801 kelch repeat-containing protein contain...    30   0.75 
At1g24480.1 68414.m03083 hypothetical protein                          29   2.3  
At5g42170.1 68418.m05133 family II extracellular lipase, putativ...    28   3.0  
At4g19090.1 68417.m02814 hypothetical protein contains Pfam doma...    28   3.0  
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family...    28   3.0  
At2g01050.1 68415.m00010 hypothetical protein                          28   4.0  
At5g10690.1 68418.m01237 pentatricopeptide (PPR) repeat-containi...    27   5.3  
At1g54940.1 68414.m06274 glycogenin glucosyltransferase (glycoge...    27   7.0  

>At1g51540.1 68414.m05801 kelch repeat-containing protein contains
            Pfam profile PF01344: Kelch motif
          Length = 1036

 Score = 30.3 bits (65), Expect = 0.75
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = +1

Query: 154  HTEVQWKVMKNSI-----TDMKHISTEKTLMVGKSAKE*MTSVVW 273
            H E  WKV+ NSI     T  KH  T+K ++VG+  +  + ++ W
Sbjct: 938  HIEFAWKVVNNSIVIVGGTTEKHPETKKMVLVGEIFQFNLNTLKW 982


>At1g24480.1 68414.m03083 hypothetical protein
          Length = 239

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +3

Query: 243 RKGMNDLCGMDLVP-DPKIIKAALH 314
           R G+ND  GMDLVP  P ++K   H
Sbjct: 113 RVGVNDSVGMDLVPYPPLVVKGDFH 137


>At5g42170.1 68418.m05133 family II extracellular lipase, putative
           similar to family II lipase EXL3 [Arabidopsis thaliana]
           GI:15054386; contains InterPro Entry IPR001087 Lipolytic
           enzyme, G-D-S-L family
          Length = 319

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 369 KDKCGNKVNEIYPYIIQEIKPTLTELGIDTPE 464
           K +C  K+NE+      +I PTL  LG + P+
Sbjct: 202 KRRCSEKLNEVARNFNAKISPTLEALGKELPD 233


>At4g19090.1 68417.m02814 hypothetical protein contains Pfam domain,
           PF04578: Protein of unknown function, DUF594
          Length = 751

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1

Query: 476 VAKLLRCVNTQFGESRLDLLNDVWVDFI 393
           +AK L+ V   FGE +  +L+ VW++F+
Sbjct: 687 LAKELQRVEKNFGEDKWKILSKVWLEFL 714


>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
           protein similar to SP|P17213 Bactericidal
           permeability-increasing protein precursor (BPI) {Homo
           sapiens}; contains Pfam profile PF02886: LBP / BPI /
           CETP family, C-terminal domain
          Length = 722

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +1

Query: 127 GSAPYLYGDHTEVQWKVMKNSITDMKHI--STEKTLMVGKSAKE*MTSVVWISFPT 288
           G  PY Y    +VQWKV +    D + +   +E   ++G  AK    ++ + S+P+
Sbjct: 184 GFLPYPYSRPIKVQWKVFEKLFVDFRDLLDHSEYCDLIG-IAKNKFQTIPYFSYPS 238


>At2g01050.1 68415.m00010 hypothetical protein
          Length = 515

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +1

Query: 256 MTSVVWISFPTQRLSKLPFMHADESMIMPLQSGL*KPAKTNVET 387
           +T+ VW+     RLS +P+ +    ++M +  GL +P K ++ T
Sbjct: 162 VTTPVWV-----RLSNIPYNYYHRCLLMEIARGLGRPLKVDMNT 200


>At5g10690.1 68418.m01237 pentatricopeptide (PPR) repeat-containing
           protein / CBS domain-containing protein contains CBS and
           PPR domain repeats
          Length = 580

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 17/65 (26%), Positives = 28/65 (43%)
 Frame = +3

Query: 252 MNDLCGMDLVPDPKIIKAALHACRRVNDYALAVRFIEACKDKCGNKVNEIYPYIIQEIKP 431
           ++++  + L PD       +HAC +  D   A++F    K+    K  E Y   +Q    
Sbjct: 213 LDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMKE----KAEEYYDDFLQPDVV 268

Query: 432 TLTEL 446
           T T L
Sbjct: 269 TYTTL 273


>At1g54940.1 68414.m06274 glycogenin glucosyltransferase
           (glycogenin)-related contains similarity to glycogenin-1
           from Mus musculus [SP|Q9R062], Rattus norvegicus
           [SP|O08730], Homo sapiens [SP|P46976]
          Length = 557

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 20/81 (24%), Positives = 35/81 (43%)
 Frame = +3

Query: 165 PVESDEEFDNRYEAYFNRKDIDGWEIRKGMNDLCGMDLVPDPKIIKAALHACRRVNDYAL 344
           P+   E  D   +    R   DGW   KG+ D+  + +  +      A+ +  R  + A+
Sbjct: 130 PLPQPEGSDANVDVIVARVPCDGWSANKGLRDVFRLQV--NLAAANLAVQSGLRTVNQAV 187

Query: 345 AVRFIEACKDKCGNKVNEIYP 407
            V FI +C       ++EI+P
Sbjct: 188 YVVFIGSC-----GPMHEIFP 203


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,946,928
Number of Sequences: 28952
Number of extensions: 224387
Number of successful extensions: 616
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)