Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_N07
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       24   1.3  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   1.3  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    24   1.3  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    24   1.3  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.2  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   6.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.0  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = -1

Query: 418 RDRNPSERHEQQRLSGLQERSQRNEPRARRPQSGPERECVQERG 287
           R+R   ERH+QQ+    Q+  Q+      +    P +  + + G
Sbjct: 77  REREEQERHKQQQQEKQQKIEQQTHSSIHQHHHDPMKMSLDKSG 120


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 194 PTTLSPTRVSCWLLTS 147
           PTT+    ++CW LTS
Sbjct: 313 PTTVMSPTINCWSLTS 328


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = -1

Query: 418 RDRNPSERHEQQRLSGLQERSQRNEPRARRPQSGPERECVQERG 287
           R+R   ERH+QQ+    Q+  Q+      +    P +  + + G
Sbjct: 228 REREEQERHKQQQQEKQQKIEQQTHSSIHQHHHDPMKMSLDKSG 271


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = -1

Query: 418 RDRNPSERHEQQRLSGLQERSQRNEPRARRPQSGPERECVQERG 287
           R+R   ERH+QQ+    Q+  Q+      +    P +  + + G
Sbjct: 287 REREEQERHKQQQQEKQQKIEQQTHSSIHQHHHDPMKMSLDKSG 330


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 282 QGPRSCTHSRSGPLCGRRALGSFRCDLSCSPLSR 383
           +GPR+C   R   L  + AL S   D    P  R
Sbjct: 432 EGPRNCIGQRFALLVSKVALASVVKDFVFDPTER 465


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 239 STVRLVPSDSKREYCPTTLSPTR 171
           S +   P D    Y P +LS TR
Sbjct: 11  SLISNTPKDMNARYLPPSLSDTR 33


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 113 ASPTACQTPTPATSRA 160
           ASPT    PTP++ R+
Sbjct: 53  ASPTPGDVPTPSSPRS 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,795
Number of Sequences: 336
Number of extensions: 1532
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)