Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_N05
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.3  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.9  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   6.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.0  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 79  YPXLFYQGMLFVVTTMILNQKK 144
           Y   FYQ +L+++T MIL + K
Sbjct: 158 YIHFFYQLLLYLITDMILMRYK 179


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -2

Query: 550 SFSSKRLSHCVFI*VISAEGLSHSSNGIPRSTFTPLS 440
           SF  K+L +C+    I+           PR   TPL+
Sbjct: 31  SFPKKKLVYCIIFGAIATLTCIEGLRDCPRKYSTPLA 67



 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 530 FTLCFHMSDFSRRFIPQLQWYSEIHFYTFI 441
           F LC    D +R F  Q+     + FY FI
Sbjct: 214 FDLCQAADDLNRYFEVQVLTIFGVSFYFFI 243


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = -2

Query: 550 SFSSKRLSHCVFI*VISAEGLSHSSNGIPRSTFTPLS 440
           SF  K+L +C+    I+           PR   TPL+
Sbjct: 27  SFPKKKLVYCIIFGAIATLTCIEGLRDCPRKYSTPLA 63



 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 530 FTLCFHMSDFSRRFIPQLQWYSEIHFYTFI 441
           F LC    D +R F  Q+     + FY FI
Sbjct: 210 FDLCQAADDLNRYFEVQVLTIFGVSFYFFI 239


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 381 RTFLCEYCILIFYRTHPLKI 322
           R F+C+YC   F +++ L I
Sbjct: 78  RQFICKYCNRQFTKSYNLLI 97


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 55  CFLFNNNNNTTYKTILFI 2
           C   N+ + TTY T LFI
Sbjct: 678 CLASNSASVTTYTTSLFI 695


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,816
Number of Sequences: 336
Number of extensions: 2575
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)