Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_N05
         (659 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0124 + 901034-901153,901455-901481,901713-901792,903739-90...    44   8e-05
04_04_1441 - 33621423-33622118,33622251-33622315,33623140-336232...    31   1.1  
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914...    29   3.3  
01_06_1763 + 39723596-39723691,39724030-39724672,39724773-397252...    29   4.3  

>02_01_0124 +
           901034-901153,901455-901481,901713-901792,903739-903811,
           904015-904072,904561-904615,905140-905164,905361-905421,
           907416-907531,907661-907812,907918-908003,908182-908309,
           908451-908501,908774-908860,908964-909033,909351-909407,
           909729-909865,910313-910390,910971-911057
          Length = 515

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
 Frame = +3

Query: 165 NRCEVCKILATELQNRLE-ETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGVC 341
           ++C  CK +A EL+  +  E  + H  +    +    +  K   Y+ SELR++E L+G+C
Sbjct: 31  DKCAACKAVAAELEIGISSEKPRNHLDLRNRLNSKGQREGKVIDYRVSELRVVELLDGLC 90

Query: 342 DRILEYNIHKERSDSTRFAKGMS-QTFKT 425
           D++ +Y + K  S    + K     +FKT
Sbjct: 91  DKMQDYTLQKLESGEKGWVKVADWNSFKT 119


>04_04_1441 -
           33621423-33622118,33622251-33622315,33623140-33623227,
           33623957-33625570
          Length = 820

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +3

Query: 243 IEIGYSLDDVQPKKKTKYQKSELRLIE-SLEGVCDRILEYNIHKERSDSTRFAK 401
           +E G  LD+V+ +KK K +  +  L+E   EG  D   E  + KE+ +  +  K
Sbjct: 314 VENGMDLDEVKVEKKKKKKAKKASLVEGETEGAKDSKQEKKVKKEKKEKKKKKK 367


>10_06_0105 -
           10790092-10790323,10791092-10791234,10791322-10791429,
           10791796-10791903,10793133-10797686,10798347-10798461,
           10799597-10799724,10799843-10800043,10800158-10800227,
           10801233-10801314,10801433-10801556,10801761-10801778
          Length = 1960

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 411 QTFKTLHGLVDKGVKVDLGIPLELWDKPSAEITHMKTQCESLLEE 545
           Q F    G   +G+   LG+ L   ++ SAE++ ++T+C +L  E
Sbjct: 380 QDFTDKLGTETQGLAQQLGVELMSRNQLSAEVSSLRTECSNLKRE 424


>01_06_1763 +
           39723596-39723691,39724030-39724672,39724773-39725275,
           39725786-39725905,39726356-39726421,39727146-39727256,
           39727650-39727726,39727996-39728063,39728384-39728497,
           39728593-39728774,39728926-39728994,39729294-39729449,
           39729657-39729734
          Length = 760

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
 Frame = +3

Query: 282 KKTKYQKSELRLIESLEGVCDRILEY-----NIHKERSDSTRFAKGMSQTFKTLHGLVDK 446
           K  + + SEL+L + +EG+   I  Y     ++ KER       + + +  K LH    K
Sbjct: 513 KALRLRSSELKLEKEIEGLSSEISSYRRKVSSLEKERQHLQSTVEALQEEKKLLH---SK 569

Query: 447 GVKVDLGIPLELWDKPSAEITHMKTQCESL 536
                +   + + +KPSA+     T  E L
Sbjct: 570 LRNTSVTEKVNIIEKPSADKRDASTATEDL 599


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,446,586
Number of Sequences: 37544
Number of extensions: 237426
Number of successful extensions: 646
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)