Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_N05
(659 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39160| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 9e-34
SB_35662| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_27394| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_42833| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-05) 31 1.1
SB_3026| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_12190| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_58447| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_12735| Best HMM Match : PT (HMM E-Value=0.36) 29 3.4
SB_59608| Best HMM Match : DiS_P_DiS (HMM E-Value=8.5) 28 5.9
SB_11736| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 28 7.7
SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071) 28 7.7
SB_2095| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_39160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 140 bits (339), Expect = 9e-34
Identities = 64/151 (42%), Positives = 97/151 (64%)
Frame = +3
Query: 201 LQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGVCDRILEYNIHKERS 380
+ L +G+ EV+++G + +PKK Y+KSELRL E+LE C +L+Y +HK++
Sbjct: 1 MSEALSVSGRSREVLQLGQVFQE-EPKK-INYRKSELRLTEALEEACSNVLDYKVHKDKP 58
Query: 381 DSTRFAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAEITHMKTQCESLLEENEIXV 560
+ R+ K S TFKTL GL +GVKVDLG P ++WD P AE+T +K +CE ++E++E +
Sbjct: 59 LAQRYEKVESVTFKTLKGLKKRGVKVDLGFPDQMWDTPDAEVTRLKNRCEYMVEQHEDDI 118
Query: 561 EDWYWNHQGKEDLKIYLCTKHALKGVDDSCL 653
+WYWNH E+L +LC + L + CL
Sbjct: 119 TEWYWNHP-DENLTQWLCIERVLNSHETDCL 148
>SB_35662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/67 (37%), Positives = 42/67 (62%)
Frame = +3
Query: 201 LQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGVCDRILEYNIHKERS 380
+ L +G+ EV+++G + +PKK Y+KSELRL E+LE C +L+Y +HK++
Sbjct: 1 MSEALSVSGRSREVLQLGQVFQE-EPKK-INYRKSELRLTEALEEACSNVLDYKVHKDKP 58
Query: 381 DSTRFAK 401
+ R+ K
Sbjct: 59 LAQRYEK 65
>SB_27394| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 95
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +3
Query: 522 QCESLLEENEIXVEDWYWNHQGKEDLKIYLCTKHALKGVDDSCL 653
QC +LE E +E+WY+ HQ +DL +LC + LK + CL
Sbjct: 17 QCVHMLELFEEVIEEWYFEHQ-DQDLMTWLCRERVLKIDEQGCL 59
>SB_42833| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-05)
Length = 641
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/88 (31%), Positives = 39/88 (44%)
Frame = +3
Query: 129 IKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSE 308
++ E + V RCE C+ LA Q RLE IE S + Q K++ K K +
Sbjct: 348 LEPERRMNVNVLKRCECCERLAFRYQERLE--------IERIRSEIEKQKKEERKSSKGK 399
Query: 309 LRLIESLEGVCDRILEYNIHKERSDSTR 392
+ E EG D + + KE D TR
Sbjct: 400 VESAEKQEGNQDENMGSRMLKE--DPTR 425
>SB_3026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 915
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 390 RFAKGMSQTFKTLHGLVDKGVKVDLGIPLE 479
RF KG+S+ F LH L++ GVK G L+
Sbjct: 545 RFLKGLSRVFHPLHKLLEYGVKWHWGPELQ 574
>SB_12190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 29.5 bits (63), Expect = 2.5
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Frame = +3
Query: 261 LDDVQPKKKTKYQKSELRLIESLEGVCDRILEYNIHKERSDST-RFAKGMSQTFKTLHGL 437
L D P+KK+ Q + +++L+ D I+ + +ERS+S R Q G
Sbjct: 468 LPDFTPEKKSMLQSLTRQYVQALK---DNIVN-RVREERSNSIGRLLLQWKQRPAEKEGR 523
Query: 438 VDKGVKVDLGIPLELWD-------KPSAEITHMKTQCESLLE 542
V GV D LEL +PS ++T+ KT E LLE
Sbjct: 524 VTGGVDQDQIQHLELKSEVPPDVRRPSKKLTNRKTPTEWLLE 565
>SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1444
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/57 (21%), Positives = 31/57 (54%)
Frame = +3
Query: 216 EETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRLIESLEGVCDRILEYNIHKERSDS 386
+E E++E + +Q ++ ++++ + RL++ EG+C++I + H+ S
Sbjct: 369 DEVRLQREMLEQQQKIIKMQQQQHQQHEEQQQRLLKQQEGLCEQIRQLENHQREVQS 425
>SB_58447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 731
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 132 KSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIE 248
KS ED+ ++ A R K L EL+NR + ++H+ +E
Sbjct: 173 KSVEDLKIEIAQRTVETKSLREELENRQKLVDELHKEVE 211
>SB_12735| Best HMM Match : PT (HMM E-Value=0.36)
Length = 1148
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 486 DKPSAEITHMKTQCESLLEENEIXVEDWYWNHQGKE 593
DK + E + + + +E I +EDW NHQ +E
Sbjct: 660 DKEAEEAESTQGEEDEAEDERNIDIEDWKTNHQSEE 695
>SB_59608| Best HMM Match : DiS_P_DiS (HMM E-Value=8.5)
Length = 370
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +3
Query: 108 ICRDDNDIKSEEDVGVKYANRCEVCKILATELQN 209
+C+ +D D+ K C++CK++ E N
Sbjct: 212 LCKYQSDCSESNDLNAKQKLLCKLCKLIGREFNN 245
>SB_11736| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 504 ITHMKTQCESLLEENEIXVEDWYWNHQGKEDLKIYLC 614
I H++ + LLEE EI V + H K+++ +Y C
Sbjct: 329 IWHVRNMIKRLLEEREITVYCDFHGHSRKQNVFMYGC 365
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +3
Query: 126 DIKSEEDVGVKYANRCEVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKS 305
+ ++EDV V A + V KIL E +N + K E + + + Q + YQ
Sbjct: 788 ETSAKEDVNVNEAAKFLVSKILQNEKENNFDALPKDPETLTLSSTSTASQSSARQPYQAG 847
Query: 306 E 308
+
Sbjct: 848 Q 848
>SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071)
Length = 429
Score = 27.9 bits (59), Expect = 7.7
Identities = 32/141 (22%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Frame = +3
Query: 174 EVCKILATELQNRLEETGKVHEVIEIGYSLDDVQPKKKTKYQKSELRL-IESLEGVCDRI 350
EV I+ TEL+ ++ET ++ +++ D+ + K +Y+ +LR+ E +E ++
Sbjct: 114 EVAAIVTTELELYVQETERLENELKL---CTDI--RAKLEYENKQLRMDFEKVEEEVEKW 168
Query: 351 LEYNI---------HKERSDSTRFAKGMSQTFKTLHGLVDKGVKVDLGIPLELWDKPSAE 503
+ N+ ++R+ ST + + F +++ +L + L DK E
Sbjct: 169 KQNNMKLTATRAREEQQRAKSTAMQRNLQMVFVD-DDIMEDSDSEELKL---LVDKLQHE 224
Query: 504 ITHMKTQCESLLEENEIXVED 566
+T M TQ + LE++ ++D
Sbjct: 225 VTTM-TQYQETLEKDYTGIKD 244
>SB_2095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 294 YQKSELRL-IESLEGVCDRILEYNIHKERSDSTRFAKGMSQTFKTLHGLVD 443
YQKS RL I LEG C R L+ + ++ K +++ F+ G D
Sbjct: 27 YQKSLPRLPIPKLEGTCRRYLDSQKPLLTPEQYQYTKNITEKFQKQEGPAD 77
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,826,968
Number of Sequences: 59808
Number of extensions: 315824
Number of successful extensions: 851
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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