Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_N04
(860 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 36 4e-04
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 36 4e-04
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 33 0.003
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 32 0.006
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 27 0.17
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 36.3 bits (80), Expect = 4e-04
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 2/163 (1%)
Frame = +3
Query: 354 PGTTIELTCEAAGSPAPSVHWFKNDSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTS 533
PG + L C AAG+P P V W + + +I T + S + ++
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTWALDG---FALPTNGRFMIGQYVTVHGDVISHVNISHVMV 491
Query: 534 QD--VYTCLXXXXXXXXXXXXVVYNTDSATELSERAKLFPLKPRIVVSYSTYVDNIGNRV 707
+D Y+C+ N + R ++ L ++ T V G +
Sbjct: 492 EDGGEYSCM-------------AENRAGKVTHAARLNVYGLPYIRLIPKVTAV--AGETL 536
Query: 708 VLPCRVKGHPKPKITWFNGQNVPIEKNPRMKVLRSGELVISSL 836
L C V G+P +I W N + + R KVL G LVI+S+
Sbjct: 537 RLKCPVAGYPIEEIKW-ERANRELPDDLRQKVLPDGTLVITSV 578
Score = 29.5 bits (63), Expect = 0.042
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 10/158 (6%)
Frame = +3
Query: 384 AAGSPAPSVHWFKN-DSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTSQDV--YTCL 554
AAG P ++ W K+ SP + + N L ++ + + SS L +T ++ YTC+
Sbjct: 635 AAGDPPLTISWLKDGQSP---FPLPPN-LASANISQLDPYSSLLSITNLAAEHSGDYTCV 690
Query: 555 XXXXXXXXXXXXVVYNTDSATELSERAKL-FPLKPRIVVSYSTYVDNIGNRVVLPCRVKG 731
+ A E+ AKL + PR +V + V L C+ +G
Sbjct: 691 A---------------ANPAAEVRYTAKLQVKVPPRWIVEPTDVSVERNKHVALHCQAQG 735
Query: 732 HPKPKITW------FNGQNVPIEKNPRMKVLRSGELVI 827
P P I W +G+ + + K+L +G L++
Sbjct: 736 VPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLLL 773
Score = 29.5 bits (63), Expect = 0.042
Identities = 31/148 (20%), Positives = 54/148 (36%), Gaps = 2/148 (1%)
Frame = +3
Query: 366 IELTCEAAGSPAPSVHWFK-NDSPVYEYDVESNELIDSSPTSIARISSTLIV-TRTTSQD 539
+ L C+A G P P++ W K S EY+ EL + + T I + L+ + +
Sbjct: 727 VALHCQAQGVPTPTIVWKKATGSKSGEYE----ELRERAYTKILSNGTLLLQHVKEDREG 782
Query: 540 VYTCLXXXXXXXXXXXXVVYNTDSATELSERAKLFPLKPRIVVSYSTYVDNIGNRVVLPC 719
Y C V +S+ + ++L +K G+ L C
Sbjct: 783 FYLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKK-------------GDTATLHC 829
Query: 720 RVKGHPKPKITWFNGQNVPIEKNPRMKV 803
V G +TW G + + + +V
Sbjct: 830 EVHGDTPVTVTWLKGGKIELNPSTNYRV 857
Score = 28.7 bits (61), Expect = 0.073
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 711 LPCRVKGHPKPKITWFNGQNVPI--EKNPRMKVLRSGELVISSLLWSDMDXY 860
L C G P + W+ GQ I + +++L SGEL++S+L D Y
Sbjct: 1333 LACNAVGDPTRE--WYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQDGGDY 1382
Score = 28.3 bits (60), Expect = 0.096
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 618 ELSERAKLFPLKPRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITW 755
+ S +L P ++ S+ G V L C G+P P++TW
Sbjct: 410 QASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTW 455
Score = 27.9 bits (59), Expect = 0.13
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 711 LPCRVKGHPKPKITWFNGQNVPIEKNPRM-KVLRSGELVI 827
L C G P I W P+ P + +VLR+G LV+
Sbjct: 50 LDCTATGSPPLNIDWSTADGHPVNDVPGVRRVLRNGTLVL 89
Score = 25.8 bits (54), Expect = 0.51
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 333 LPSYAHTPGTTIELTCEAAGSPAPSVHW 416
+P G T+ L C AG P + W
Sbjct: 525 IPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 22.6 bits (46), Expect = 4.8
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Frame = +3
Query: 291 SDGSHKYLSITQGPLPSYAHTPGTTIE--------LTCEAAGSPAPSVHWFKND 428
S G H + + +GP S+ P + +E L C A GSP ++ W D
Sbjct: 17 SAGGHGFDAHLRGP--SFVMEPPSRVEFSNSSGAWLDCTATGSPPLNIDWSTAD 68
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 36.3 bits (80), Expect = 4e-04
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 2/163 (1%)
Frame = +3
Query: 354 PGTTIELTCEAAGSPAPSVHWFKNDSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTS 533
PG + L C AAG+P P V W + + +I T + S + ++
Sbjct: 435 PGPAVSLKCSAAGNPTPQVTWALDG---FALPTNGRFMIGQYVTVHGDVISHVNISHVMV 491
Query: 534 QD--VYTCLXXXXXXXXXXXXVVYNTDSATELSERAKLFPLKPRIVVSYSTYVDNIGNRV 707
+D Y+C+ N + R ++ L ++ T V G +
Sbjct: 492 EDGGEYSCM-------------AENRAGKVTHAARLNVYGLPYIRLIPKVTAV--AGETL 536
Query: 708 VLPCRVKGHPKPKITWFNGQNVPIEKNPRMKVLRSGELVISSL 836
L C V G+P +I W N + + R KVL G LVI+S+
Sbjct: 537 RLKCPVAGYPIEEIKW-ERANRELPDDLRQKVLPDGTLVITSV 578
Score = 29.5 bits (63), Expect = 0.042
Identities = 31/148 (20%), Positives = 54/148 (36%), Gaps = 2/148 (1%)
Frame = +3
Query: 366 IELTCEAAGSPAPSVHWFK-NDSPVYEYDVESNELIDSSPTSIARISSTLIV-TRTTSQD 539
+ L C+A G P P++ W K S EY+ EL + + T I + L+ + +
Sbjct: 723 VALHCQAQGVPTPTIVWKKATGSKSGEYE----ELRERAYTKILSNGTLLLQHVKEDREG 778
Query: 540 VYTCLXXXXXXXXXXXXVVYNTDSATELSERAKLFPLKPRIVVSYSTYVDNIGNRVVLPC 719
Y C V +S+ + ++L +K G+ L C
Sbjct: 779 FYLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKK-------------GDTATLHC 825
Query: 720 RVKGHPKPKITWFNGQNVPIEKNPRMKV 803
V G +TW G + + + +V
Sbjct: 826 EVHGDTPVTVTWLKGGKIELNPSTNYRV 853
Score = 28.7 bits (61), Expect = 0.073
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 711 LPCRVKGHPKPKITWFNGQNVPI--EKNPRMKVLRSGELVISSLLWSDMDXY 860
L C G P + W+ GQ I + +++L SGEL++S+L D Y
Sbjct: 1329 LACNAVGDPTRE--WYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQDGGDY 1378
Score = 28.3 bits (60), Expect = 0.096
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 618 ELSERAKLFPLKPRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITW 755
+ S +L P ++ S+ G V L C G+P P++TW
Sbjct: 410 QASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQVTW 455
Score = 27.9 bits (59), Expect = 0.13
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 711 LPCRVKGHPKPKITWFNGQNVPIEKNPRM-KVLRSGELVI 827
L C G P I W P+ P + +VLR+G LV+
Sbjct: 50 LDCTATGSPPLNIDWSTADGHPVNDVPGVRRVLRNGTLVL 89
Score = 27.5 bits (58), Expect = 0.17
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Frame = +3
Query: 612 ATELSERAKLFP-LKPRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITW------FNGQN 770
A E+S +L + PR +V + V L C+ +G P P I W +G+
Sbjct: 691 AAEVSHTQRLVVHVPPRWIVEPTDVSVERNKHVALHCQAQGVPTPTIVWKKATGSKSGEY 750
Query: 771 VPIEKNPRMKVLRSGELVI 827
+ + K+L +G L++
Sbjct: 751 EELRERAYTKILSNGTLLL 769
Score = 25.8 bits (54), Expect = 0.51
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 333 LPSYAHTPGTTIELTCEAAGSPAPSVHW 416
+P G T+ L C AG P + W
Sbjct: 525 IPKVTAVAGETLRLKCPVAGYPIEEIKW 552
Score = 22.6 bits (46), Expect = 4.8
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Frame = +3
Query: 291 SDGSHKYLSITQGPLPSYAHTPGTTIE--------LTCEAAGSPAPSVHWFKND 428
S G H + + +GP S+ P + +E L C A GSP ++ W D
Sbjct: 17 SAGGHGFDAHLRGP--SFVMEPPSRVEFSNSSGAWLDCTATGSPPLNIDWSTAD 68
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 33.5 bits (73), Expect = 0.003
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 693 IGNRVVLPCRVKGHPKPKITW-FNGQNVPIEKNPRMKVLRSGELVISSL 836
+G+ V + C V G P P + W NG ++ P ++V G L ++ +
Sbjct: 324 VGDNVEIKCDVTGTPPPPLVWRRNGADLETLNEPEIRVFNDGSLYLTKV 372
Score = 31.5 bits (68), Expect = 0.010
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 372 LTCEAAGSPAPSVHWFKNDSPVYEYDVESNELIDSSPTSIAR 497
+ C AG P P V W KND + + +LI + I +
Sbjct: 421 IRCHVAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLIIK 462
Score = 27.1 bits (57), Expect = 0.22
Identities = 14/71 (19%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +3
Query: 654 PRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITWF-NGQNVPIEKNPRMKVLRSG-ELVI 827
P + V+ + + C V G P P++ W N + + ++ + ++ +G +L+I
Sbjct: 402 PEVKVTPRFQAKRLKEEANIRCHVAGEPLPRVQWLKNDEALNHDQPDKYDLIGNGTKLII 461
Query: 828 SSLLWSDMDXY 860
++ ++D Y
Sbjct: 462 KNVDYADTGAY 472
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 32.3 bits (70), Expect = 0.006
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 705 VVLPCRVKGHPKPKITWFNGQNVPIEKNPRMKVLRSGELVISSLLWSDMDXY 860
V LPC G P P++TW + ++ + R++ L G L I + +D Y
Sbjct: 1294 VKLPCLAVGVPAPEVTW-KVRGAVLQSSDRLRQLPEGSLFIKEVDRTDAGEY 1344
Score = 31.5 bits (68), Expect = 0.010
Identities = 38/164 (23%), Positives = 61/164 (37%), Gaps = 3/164 (1%)
Frame = +3
Query: 354 PGTTIELTCEAAGSPAPSVHW---FKNDSPVYEYDVESNELIDSSPTSIARISSTLIVTR 524
PG ++ L C A+G+P P + W K S V ++ S ISS T
Sbjct: 407 PGPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTVNGDVVSHLNISS----TH 462
Query: 525 TTSQDVYTCLXXXXXXXXXXXXVVYNTDSATELSERAKLFPLKPRIVVSYSTYVDNIGNR 704
T +Y C + + + E S R ++ L + G
Sbjct: 463 TNDGGLYKC-------------IAASKVGSAEHSARLNVYGLP--FIRHMDKKAIVAGET 507
Query: 705 VVLPCRVKGHPKPKITWFNGQNVPIEKNPRMKVLRSGELVISSL 836
+ + C V G+P I W V + N + KV +G L+I ++
Sbjct: 508 LRVTCPVAGYPIESIVWERDTRV-LPINRKQKVFPNGTLIIENV 550
Score = 31.1 bits (67), Expect = 0.014
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 696 GNRVVLPCRVKGHPKPKITWFNGQNVPIEKNPRMK-VLRSGELV 824
G V+ C+ +G+P+P I W + P ++ VL +G LV
Sbjct: 18 GTGAVVECQARGNPQPDIIWVRADGSAVGDVPGLRQVLPNGNLV 61
Score = 27.1 bits (57), Expect = 0.22
Identities = 35/144 (24%), Positives = 56/144 (38%), Gaps = 4/144 (2%)
Frame = +3
Query: 366 IELTCEAAGSPAPSVHWFK-NDSPVYEYDVESNELIDSSPTSIARISSTLIVTRTTSQD- 539
+ L C A G P P W+K + V+ NE + ++S TLI+ +D
Sbjct: 230 LPLLCPAQGFPVPVHRWYKFIEGSSRRQPVQLNE-------RVRQVSGTLIIREARVEDS 282
Query: 540 -VYTCLXXXXXXXXXXXXVVYNTDSATELSERAKLFPLKPRIVVSYSTYVDNIGNRVVLP 716
Y C+ V T L+ A PL I ST + G
Sbjct: 283 GKYLCIVNNS---------VGGESVETVLTVTA---PLGAEI--EPSTQTIDFGRPATFT 328
Query: 717 CRVKGHPKPKITWF-NGQNVPIEK 785
C V+G+P ++W +G+ + +E+
Sbjct: 329 CNVRGNPIKTVSWLKDGKPLGLEE 352
Score = 26.6 bits (56), Expect = 0.29
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 357 GTTIELTCEAAGSPAPSVHWFKND 428
GT + C+A G+P P + W + D
Sbjct: 18 GTGAVVECQARGNPQPDIIWVRAD 41
Score = 26.6 bits (56), Expect = 0.29
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 696 GNRVVLPCRVKGHPKPKITW 755
G+ + C+ G PKP++TW
Sbjct: 693 GSDARVECKADGFPKPQVTW 712
Score = 26.2 bits (55), Expect = 0.39
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 357 GTTIELTCEAAGSPAPSVHWFKNDSPV 437
G TC G+P +V W K+ P+
Sbjct: 322 GRPATFTCNVRGNPIKTVSWLKDGKPL 348
Score = 26.2 bits (55), Expect = 0.39
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 654 PRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKITW 755
P+I +++ G + L C G+P P+ITW
Sbjct: 394 PQIRQAFAEETLQPGPSMFLKCVASGNPTPEITW 427
Score = 25.0 bits (52), Expect = 0.90
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +3
Query: 345 AHTPGTTIELTCEAAGSPAPSVHWFK--NDSP 434
A G+ + C+A G P P V W K D+P
Sbjct: 689 AFAQGSDARVECKADGFPKPQVTWKKAAGDTP 720
Score = 25.0 bits (52), Expect = 0.90
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 366 IELTCEAAGSPAPSVHW 416
++L C A G PAP V W
Sbjct: 1294 VKLPCLAVGVPAPEVTW 1310
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 27.5 bits (58), Expect = 0.17
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 693 IGNRVVLPCRVKGHPKPKITW 755
+G ++ C G P+P+ITW
Sbjct: 36 LGRKITFFCMATGFPRPEITW 56
Score = 27.1 bits (57), Expect = 0.22
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 357 GTTIELTCEAAGSPAPSVHWFKNDSPVYEY 446
G I C A G P P + W K+ +Y +
Sbjct: 37 GRKITFFCMATGFPRPEITWLKDGIELYHH 66
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,569
Number of Sequences: 438
Number of extensions: 4835
Number of successful extensions: 41
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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