Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_N02
         (674 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0140 + 7125914-7126264,7126426-7126677,7126766-7126861,712...    31   0.64 
03_05_0172 - 21488504-21488752,21488862-21489611,21489691-214897...    30   1.5  
08_01_0264 - 2142856-2143152,2143667-2143829,2143915-2143992,214...    29   4.5  
10_03_0029 + 7196149-7196213,7196303-7196424,7197616-7197822,719...    28   5.9  
01_01_0347 + 2765517-2767109,2767214-2767228                           28   7.8  

>02_02_0140 +
           7125914-7126264,7126426-7126677,7126766-7126861,
           7127013-7127187,7127283-7127363,7127451-7127548,
           7127828-7127920,7128607-7128678,7128998-7129117,
           7129210-7129260,7130026-7130211,7130355-7130411
          Length = 543

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -3

Query: 552 IMIREFHAPKLLHVQYQLTSVVHSDGFLHPPTI 454
           I +RE H PKL H+   +  +V ++G+ H  +I
Sbjct: 300 INLREVHQPKLSHIVCDIDGIVDNEGYPHEESI 332


>03_05_0172 - 21488504-21488752,21488862-21489611,21489691-21489789,
            21489862-21490776,21490847-21490976,21491438-21491583,
            21491801-21491896,21492521-21492613,21492702-21492755,
            21492897-21492956,21493046-21493171,21493283-21493366,
            21493444-21493587,21493667-21493963
          Length = 1080

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 150  AGVKQGKETSGLLMSVIRTLSASETNEQREKERAKLEKEYKKSDARL-DELVAVHA 314
            A  K G++  G   +       S     REKERA+L+++ ++   +L D   AVHA
Sbjct: 924  AAAKAGRKGCGTAFAAALAAELSTVRIDREKERAQLKEQNRRLRIQLRDTAEAVHA 979


>08_01_0264 -
           2142856-2143152,2143667-2143829,2143915-2143992,
           2144097-2144162,2144941-2145098
          Length = 253

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 150 AGVKQGKETSGLLMSVIRTLSASETNEQREKERAKLEKEYKKSDARL 290
           A  KQ K+T+  L   I+ L A +   + EK++ K+EKE  +   ++
Sbjct: 135 AEAKQLKDTNESLEDKIKELKAEKDELRDEKQKLKVEKETLEQQVKI 181


>10_03_0029 +
           7196149-7196213,7196303-7196424,7197616-7197822,
           7197904-7198091,7198493-7198628,7198973-7199069,
           7199200-7199300,7199644-7199807,7200029-7200217,
           7200590-7200711,7200961-7200979
          Length = 469

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +3

Query: 186 LMSVIRTLSASE--TNEQREKERAKLEKEYKKSDARLDELVA 305
           L+SV  +  A E  T+  REK     E E+  SD+ ++ELV+
Sbjct: 88  LVSVTTSFVAEEDATSSDREKYEINGENEFNVSDSEMEELVS 129


>01_01_0347 + 2765517-2767109,2767214-2767228
          Length = 535

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 95  INIINSGTMSSPPPTKPPRWG 157
           IN+  S   S PPP  PP WG
Sbjct: 77  INLPLSADPSPPPPPHPPSWG 97


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,698,597
Number of Sequences: 37544
Number of extensions: 316032
Number of successful extensions: 1286
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)