Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_N02
(674 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 32 0.49
SB_17140| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 31 0.85
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_31683| Best HMM Match : ApoC-I (HMM E-Value=1.8) 30 1.5
SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13) 29 2.6
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 29 4.5
SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41) 28 6.0
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 28 7.9
SB_55370| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_52740| Best HMM Match : CbiA (HMM E-Value=1.4e-15) 28 7.9
SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 28 7.9
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_43524| Best HMM Match : ICL (HMM E-Value=0) 28 7.9
SB_3099| Best HMM Match : TFIIE_beta (HMM E-Value=1.8e-20) 28 7.9
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 31.9 bits (69), Expect = 0.49
Identities = 23/74 (31%), Positives = 40/74 (54%)
Frame = +3
Query: 111 AAQCPLLHQRNHPAGVKQGKETSGLLMSVIRTLSASETNEQREKERAKLEKEYKKSDARL 290
AA+C +LHQ+N K+ KE + + E E+ EKE+ E+E +K ++
Sbjct: 531 AAKCTMLHQKNSELS-KKVKEMKQMEEEI---SLLKEDLEETEKEKLAAEEECQKLREQV 586
Query: 291 DELVAVHAQEITDV 332
D+L +H +EI ++
Sbjct: 587 DKL--LHFKEIYEL 598
>SB_17140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1236
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 222 TNEQREKERAKLEKEYKKSDARLDELVAVHAQEITDVMQKFTAVGTALSVWG 377
+N + E+A K K++ +L E+ +HA E+ + F V TAL + G
Sbjct: 61 SNNATKLEQASKYKNIKQTPRKLPEIYDMHATEVPEQTNGFIVVHTALGLVG 112
>SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 583
Score = 31.1 bits (67), Expect = 0.85
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = -3
Query: 522 LLHVQYQLTSVVHSDGFL-HPPTIFLGHHVLIVANLCMHPDEPLLPHNAVPILIRLYPQL 346
LL + + ++ FL HP + FL H + A HP P L H+A+ Y L
Sbjct: 9 LLILDFLSHDAIYKALFLAHPCSPFLSHDAIYKALFLAHPCSPFLSHDAI------YKAL 62
Query: 345 *IFA*HP*SPVHEQQLAHPALHRS 274
F HP SP L+H A++++
Sbjct: 63 --FLAHPCSPF----LSHDAIYKA 80
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = -3
Query: 468 HPPTIFLGHHVLIVANLCMHPDEPLLPHNAVPILIRLYPQL*IFA*HP*SPVHEQQLAHP 289
HP + FL H + A HP P L H+A+ Y L F HP SP L+H
Sbjct: 123 HPCSPFLSHDAIYKALFLAHPCSPFLSHDAI------YKAL--FLAHPCSPF----LSHD 170
Query: 288 ALHRS 274
A++++
Sbjct: 171 AIYKA 175
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = -3
Query: 468 HPPTIFLGHHVLIVANLCMHPDEPLLPHNAVPILIRLYPQL*IFA*HP*SPVHEQQLAHP 289
HP + FL H + A HP P L H+A+ Y L F HP SP L+H
Sbjct: 161 HPCSPFLSHDAIYKALFLAHPYSPFLSHDAI------YKAL--FLAHPCSPF----LSHD 208
Query: 288 ALHRS 274
A++++
Sbjct: 209 AIYKA 213
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = -3
Query: 468 HPPTIFLGHHVLIVANLCMHPDEPLLPHNAVPILIRLYPQL*IFA*HP*SPVHEQQLAHP 289
HP + FL H + A HP P L H+A+ Y L F HP SP L+H
Sbjct: 199 HPCSPFLSHDAIYKALFLAHPCSPFLSHDAI------YKAL--FLAHPCSPF----LSHD 246
Query: 288 ALHRS 274
A++++
Sbjct: 247 AIYKA 251
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = -3
Query: 468 HPPTIFLGHHVLIVANLCMHPDEPLLPHNAVPILIRLYPQL*IFA*HP*SPVHEQQLAHP 289
HP + FL H + A HP P L H+A+ Y L F HP SP L+H
Sbjct: 237 HPCSPFLSHDAIYKALFLAHPCSPFLSHDAI------YKAL--FLAHPCSPF----LSHD 284
Query: 288 ALHRS 274
A++++
Sbjct: 285 AIYKA 289
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -3
Query: 468 HPPTIFLGHHVLIVANLCMHPDEPLLPHNAV-PILIRLYP 352
HP + FL H + A HP P L H+A+ L YP
Sbjct: 275 HPCSPFLSHDAIYKALFLAHPCSPFLSHDAIYKALFLAYP 314
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 468 HPPTIFLGHHVLIVANLCMHPDEPLLPHNAV 376
HP + FL H + A HP P L H+A+
Sbjct: 66 HPCSPFLSHDAIYKALFLAHPYSPFLSHDAI 96
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 207 LSASETNEQREKERAKLEKEYKKSDARLDELVAVHAQEITD 329
+ ASE E +E+ +LE+ YK+ L + A QEI D
Sbjct: 307 VQASEVKESYNREKQELEESYKQKIKELQKNFAKEKQEIED 347
>SB_31683| Best HMM Match : ApoC-I (HMM E-Value=1.8)
Length = 804
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +3
Query: 207 LSASETNEQREKERAKLEKEYKKSDARLDELVAVHAQEITDVMQKFTAVGTALSVWGQH 383
++A + E+ K+ K+Y + L EL A+H+ + QK G VW H
Sbjct: 690 IAADQAIEEVGKKSVASIKQYMRHLVFLAELEALHSAQTLSAFQKCNKEGLVRGVWRNH 748
>SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13)
Length = 752
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/27 (55%), Positives = 21/27 (77%), Gaps = 3/27 (11%)
Frame = +3
Query: 210 SASETNEQRE---KERAKLEKEYKKSD 281
SA+E N++RE KE+ K+E+E KKSD
Sbjct: 364 SATEENDEREQENKEKNKVEEEEKKSD 390
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +3
Query: 120 CPLLHQRNHPAGVKQGKETSGLLMSVIRTLSASETNEQREKERAKLEKEYKKSDARLDEL 299
CP L + +Q + + L + A+ + +EK++ K E E +SD DE
Sbjct: 1494 CPPLGEDEETKRQRQKEAAANALQEYEAMMKAAADEKSKEKKKRKKEDEATRSDDGTDEK 1553
Query: 300 VAVHAQE 320
QE
Sbjct: 1554 TEDSMQE 1560
>SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41)
Length = 1682
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Frame = +3
Query: 210 SASETNEQREKERAKLEKEYKK----SDARLDE 296
SA+E+NE+ EKE+ K + + KK SD +DE
Sbjct: 2 SAAESNEEGEKEKEKKKSKKKKKVADSDVSMDE 34
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +3
Query: 228 EQREKERAKLEKEYKKSDARLDELVAVHAQEITDVMQKFTAVGTALSVWGQH 383
++R++E+ KLEKE +K L+ +E ++ K + +WG H
Sbjct: 362 KERQREKEKLEKEKQKE---LERKELQRQKERMKILLKVKPISYRAMIWGLH 410
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 92 FINIINSGTMSSPPPTKPPRWG 157
F+ + + S+ PP PP+WG
Sbjct: 2227 FVKLASDAVCSAKPPPPPPKWG 2248
>SB_55370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -3
Query: 603 YLGQLSMYKLRXVHDQLIMIREFHAPKLLHVQYQL-TSVVHSDGFLHPPTIFLGHHV 436
Y+G MY V +++ R + PK+++ ++ + V++S ++ P ++ H+V
Sbjct: 62 YVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYV 118
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -3
Query: 603 YLGQLSMYKLRXVHDQLIMIREFHAPKLLHVQYQL-TSVVHSDGFLHPPTIFLGHHV 436
Y+G MY V +++ R + PK+++ ++ + V++S ++ P ++ H+V
Sbjct: 73 YVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYV 129
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -3
Query: 603 YLGQLSMYKLRXVHDQLIMIREFHAPKLLHVQYQL-TSVVHSDGFLHPPTIFLGHHV 436
Y+G MY V +++ R + PK+++ ++ + V++S ++ P ++ H+V
Sbjct: 84 YVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYV 140
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -3
Query: 603 YLGQLSMYKLRXVHDQLIMIREFHAPKLLHVQYQL-TSVVHSDGFLHPPTIFLGHHV 436
Y+G MY V +++ R + PK+++ ++ + V++S ++ P ++ H+V
Sbjct: 95 YVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYV 151
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -3
Query: 603 YLGQLSMYKLRXVHDQLIMIREFHAPKLLHVQYQL-TSVVHSDGFLHPPTIFLGHHV 436
Y+G MY V +++ R + PK+++ ++ + V++S ++ P ++ H+V
Sbjct: 106 YVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYV 162
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -3
Query: 603 YLGQLSMYKLRXVHDQLIMIREFHAPKLLHVQYQL-TSVVHSDGFLHPPTIFLGHHV 436
Y+G MY V +++ R + PK+++ ++ + V++S ++ P ++ H+V
Sbjct: 117 YVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYV 173
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -3
Query: 603 YLGQLSMYKLRXVHDQLIMIREFHAPKLLHVQYQL-TSVVHSDGFLHPPTIFLGHHV 436
Y+G MY V +++ R + PK+++ ++ + V++S ++ P ++ H+V
Sbjct: 128 YVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYVGPKVMYSRHYV 184
>SB_52740| Best HMM Match : CbiA (HMM E-Value=1.4e-15)
Length = 480
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 105 LIAAQCPLLHQRNHPAGVKQGKETSGLLMSVIRTLSASETN 227
L+ Q LH++ + + +E LL SV++T SAS T+
Sbjct: 420 LLKQQASNLHEQKKAGVIFEAEEVITLLTSVLKTSSASRTS 460
>SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 599
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 219 ETNEQREKERAKLEKEYKKSDARLDELVAVHAQEITDVMQKFTAVGTALSVW 374
E ++R+KER K K+ KK + R E +E +KFT ++ VW
Sbjct: 47 ERKKERKKERKKERKKEKKKE-RKKERKEERKKERKKAEKKFTDSNESVLVW 97
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 92 FINIINSGTMSSPPPTKPPRWG 157
F+ + + S+ PP PP+WG
Sbjct: 205 FVKLASDAVCSAKPPPPPPKWG 226
>SB_43524| Best HMM Match : ICL (HMM E-Value=0)
Length = 254
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -3
Query: 447 GHHVLIVANLC--MHPDEPLLPHNAVPILIR 361
G V ANL M+PD+ L P N+VP++I+
Sbjct: 90 GWQVAADANLAGEMYPDQSLYPANSVPMVIK 120
>SB_3099| Best HMM Match : TFIIE_beta (HMM E-Value=1.8e-20)
Length = 318
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +3
Query: 189 MSVIRTLSASETNEQREKERAKLEKEYKKSDARLDE 296
+S ++ T + ++++AK +K++KK + LDE
Sbjct: 242 ISTMQDTGVKRTQQMPQRKKAKRKKQFKKLNVHLDE 277
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,492,702
Number of Sequences: 59808
Number of extensions: 362881
Number of successful extensions: 1231
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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