Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_N02
         (674 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067263-1|AAH67263.1|  974|Homo sapiens exocyst complex compone...    66   1e-10
BC026174-1|AAH26174.1|  474|Homo sapiens EXOC4 protein protein.        66   1e-10
AL831989-1|CAD89977.1|  974|Homo sapiens hypothetical protein pr...    66   1e-10
AK027688-1|BAB55298.1|  974|Homo sapiens protein ( Homo sapiens ...    66   1e-10
AF380839-1|AAK57456.1|  974|Homo sapiens secretory protein SEC8 ...    66   1e-10
AB051486-1|BAB21790.1|  966|Homo sapiens KIAA1699 protein protein.     66   1e-10
AC020602-1|AAY14765.1|   59|Homo sapiens unknown protein.              32   2.1  
BC132727-1|AAI32728.1| 1214|Homo sapiens transient receptor pote...    30   6.5  
AY297046-1|AAP44475.1| 1069|Homo sapiens transient receptor pote...    30   6.5  
AY297045-1|AAP44474.1| 1214|Homo sapiens transient receptor pote...    30   6.5  
AY297044-1|AAP44473.1| 1040|Homo sapiens transient receptor pote...    30   6.5  
AY046396-1|AAL02142.1| 1040|Homo sapiens TRP-related cation infl...    30   6.5  
AK000048-1|BAA90907.1| 1016|Homo sapiens protein ( Homo sapiens ...    30   6.5  
AJ575813-1|CAE05941.1| 1214|Homo sapiens transient receptor pote...    30   6.5  
AF497623-1|AAM18083.1| 1214|Homo sapiens cation channel TRPM4B p...    30   6.5  

>BC067263-1|AAH67263.1|  974|Homo sapiens exocyst complex component
           4 protein.
          Length = 974

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/66 (45%), Positives = 45/66 (68%)
 Frame = +3

Query: 156 VKQGKETSGLLMSVIRTLSASETNEQREKERAKLEKEYKKSDARLDELVAVHAQEITDVM 335
           V + K+ SGLL+SVIRTLS S+  E RE E+ +LE+ Y+K D  LDEL+  H  E+T  +
Sbjct: 14  VSKSKDPSGLLISVIRTLSTSDDVEDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAI 73

Query: 336 QKFTAV 353
           + + ++
Sbjct: 74  RTYQSI 79


>BC026174-1|AAH26174.1|  474|Homo sapiens EXOC4 protein protein.
          Length = 474

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/66 (45%), Positives = 45/66 (68%)
 Frame = +3

Query: 156 VKQGKETSGLLMSVIRTLSASETNEQREKERAKLEKEYKKSDARLDELVAVHAQEITDVM 335
           V + K+ SGLL+SVIRTLS S+  E RE E+ +LE+ Y+K D  LDEL+  H  E+T  +
Sbjct: 14  VSKSKDPSGLLISVIRTLSTSDDVEDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAI 73

Query: 336 QKFTAV 353
           + + ++
Sbjct: 74  RTYQSI 79


>AL831989-1|CAD89977.1|  974|Homo sapiens hypothetical protein
           protein.
          Length = 974

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/66 (45%), Positives = 45/66 (68%)
 Frame = +3

Query: 156 VKQGKETSGLLMSVIRTLSASETNEQREKERAKLEKEYKKSDARLDELVAVHAQEITDVM 335
           V + K+ SGLL+SVIRTLS S+  E RE E+ +LE+ Y+K D  LDEL+  H  E+T  +
Sbjct: 14  VSKSKDPSGLLISVIRTLSTSDDVEDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAI 73

Query: 336 QKFTAV 353
           + + ++
Sbjct: 74  RTYQSI 79


>AK027688-1|BAB55298.1|  974|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14782 fis, clone NT2RP4000524, highly similar to
           Mus musculus Sec8 mRNA. ).
          Length = 974

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/66 (45%), Positives = 45/66 (68%)
 Frame = +3

Query: 156 VKQGKETSGLLMSVIRTLSASETNEQREKERAKLEKEYKKSDARLDELVAVHAQEITDVM 335
           V + K+ SGLL+SVIRTLS S+  E RE E+ +LE+ Y+K D  LDEL+  H  E+T  +
Sbjct: 14  VSKSKDPSGLLISVIRTLSTSDDVEDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAI 73

Query: 336 QKFTAV 353
           + + ++
Sbjct: 74  RTYQSI 79


>AF380839-1|AAK57456.1|  974|Homo sapiens secretory protein SEC8
           protein.
          Length = 974

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/66 (45%), Positives = 45/66 (68%)
 Frame = +3

Query: 156 VKQGKETSGLLMSVIRTLSASETNEQREKERAKLEKEYKKSDARLDELVAVHAQEITDVM 335
           V + K+ SGLL+SVIRTLS S+  E RE E+ +LE+ Y+K D  LDEL+  H  E+T  +
Sbjct: 14  VSKSKDPSGLLISVIRTLSTSDDVEDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAI 73

Query: 336 QKFTAV 353
           + + ++
Sbjct: 74  RTYQSI 79


>AB051486-1|BAB21790.1|  966|Homo sapiens KIAA1699 protein protein.
          Length = 966

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/66 (45%), Positives = 45/66 (68%)
 Frame = +3

Query: 156 VKQGKETSGLLMSVIRTLSASETNEQREKERAKLEKEYKKSDARLDELVAVHAQEITDVM 335
           V + K+ SGLL+SVIRTLS S+  E RE E+ +LE+ Y+K D  LDEL+  H  E+T  +
Sbjct: 6   VSKSKDPSGLLISVIRTLSTSDDVEDRENEKGRLEEAYEKCDRDLDELIVQHYTELTTAI 65

Query: 336 QKFTAV 353
           + + ++
Sbjct: 66  RTYQSI 71


>AC020602-1|AAY14765.1|   59|Homo sapiens unknown protein.
          Length = 59

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 129 LHQRNHPAGVKQGKETSGLLMSVIRTLSASETNEQREKERAK 254
           LH+ +   G +QG + SGL  S      A+ TN+QR  +R K
Sbjct: 5   LHESHKVTGAEQGLQVSGLPDSAAPEGGAAHTNDQRRCQRMK 46


>BC132727-1|AAI32728.1| 1214|Homo sapiens transient receptor potential
            cation channel, subfamily M, member 4 protein.
          Length = 1214

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 510  QYQLTSVVHSDGFLHPPTIFLGHHVLIVANLCMHPDEP 397
            +Y+L    HS   L PP I + H  L++  LC  P  P
Sbjct: 1062 RYRLIREFHSRPALAPPFIVISHLRLLLRQLCRRPRSP 1099


>AY297046-1|AAP44475.1| 1069|Homo sapiens transient receptor potential
            cation channel subfamily M member 4 splice variant
            protein.
          Length = 1069

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 510  QYQLTSVVHSDGFLHPPTIFLGHHVLIVANLCMHPDEP 397
            +Y+L    HS   L PP I + H  L++  LC  P  P
Sbjct: 917  RYRLIREFHSRPALAPPFIVISHLRLLLRQLCRRPRSP 954


>AY297045-1|AAP44474.1| 1214|Homo sapiens transient receptor potential
            cation channel subfamily M member 4 splice variant
            protein.
          Length = 1214

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 510  QYQLTSVVHSDGFLHPPTIFLGHHVLIVANLCMHPDEP 397
            +Y+L    HS   L PP I + H  L++  LC  P  P
Sbjct: 1062 RYRLIREFHSRPALAPPFIVISHLRLLLRQLCRRPRSP 1099


>AY297044-1|AAP44473.1| 1040|Homo sapiens transient receptor potential
            cation channel subfamily M member 4 splice variant
            protein.
          Length = 1040

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 510  QYQLTSVVHSDGFLHPPTIFLGHHVLIVANLCMHPDEP 397
            +Y+L    HS   L PP I + H  L++  LC  P  P
Sbjct: 888  RYRLIREFHSRPALAPPFIVISHLRLLLRQLCRRPRSP 925


>AY046396-1|AAL02142.1| 1040|Homo sapiens TRP-related cation influx
            channel protein.
          Length = 1040

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 510  QYQLTSVVHSDGFLHPPTIFLGHHVLIVANLCMHPDEP 397
            +Y+L    HS   L PP I + H  L++  LC  P  P
Sbjct: 888  RYRLIREFHSRPALAPPFIVISHLRLLLRQLCRRPRSP 925


>AK000048-1|BAA90907.1| 1016|Homo sapiens protein ( Homo sapiens cDNA
            FLJ20041 fis, clone COL00423. ).
          Length = 1016

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 510  QYQLTSVVHSDGFLHPPTIFLGHHVLIVANLCMHPDEP 397
            +Y+L    HS   L PP I + H  L++  LC  P  P
Sbjct: 888  RYRLIREFHSRPALAPPFIVISHLRLLLRQLCRRPRSP 925


>AJ575813-1|CAE05941.1| 1214|Homo sapiens transient receptor potential
            ion channel melastatin subgroup member 4 protein protein.
          Length = 1214

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 510  QYQLTSVVHSDGFLHPPTIFLGHHVLIVANLCMHPDEP 397
            +Y+L    HS   L PP I + H  L++  LC  P  P
Sbjct: 1062 RYRLIREFHSRPALAPPFIVISHLRLLLRQLCRRPRSP 1099


>AF497623-1|AAM18083.1| 1214|Homo sapiens cation channel TRPM4B
            protein.
          Length = 1214

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 510  QYQLTSVVHSDGFLHPPTIFLGHHVLIVANLCMHPDEP 397
            +Y+L    HS   L PP I + H  L++  LC  P  P
Sbjct: 1062 RYRLIREFHSRPALAPPFIVISHLRLLLRQLCRRPRSP 1099


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,489,424
Number of Sequences: 237096
Number of extensions: 1852016
Number of successful extensions: 8873
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8860
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)